obitools/obitools4
2
0
Fork 0
mirror of https://github.com/metabarcoding/obitools4.git synced 2025-06-29 16:20:46 +00:00
Code Issues Packages Projects Releases Wiki Activity

Refactoring codes for removing buffer size options. An some other changes...

Browse Source 
Former-commit-id: 10b57cc1a27446ade3c444217341e9651e89cdce
This commit is contained in:
Eric Coissac
2023-03-07 11:12:13 +07:00
parent 9811e440b8
commit d88de15cdc
52 changed files with 1172 additions and 421 deletions
Download Patch File Download Diff File Expand all files Collapse all files

10
pkg/obichunk/chunk_on_disk.go
View File

@ -36,20 +36,14 @@ func find(root, ext string) []string {
}
func ISequenceChunkOnDisk(iterator obiiter.IBioSequence,
classifier *obiseq.BioSequenceClassifier,
sizes ...int) (obiiter.IBioSequence, error) {
classifier *obiseq.BioSequenceClassifier) (obiiter.IBioSequence, error) {
dir, err := tempDir()
if err != nil {
return obiiter.NilIBioSequence, err
}
bufferSize := iterator.BufferSize()
if len(sizes) > 0 {
bufferSize = sizes[0]
}
newIter := obiiter.MakeIBioSequence(bufferSize)
newIter := obiiter.MakeIBioSequence()
newIter.Add(1)