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Refactoring codes for removing buffer size options. An some other changes...

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Former-commit-id: 10b57cc1a27446ade3c444217341e9651e89cdce
This commit is contained in:
Eric Coissac
2023-03-07 11:12:13 +07:00
parent 9811e440b8
commit d88de15cdc
52 changed files with 1172 additions and 421 deletions
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15
pkg/obichunk/subchunks.go
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@ -58,20 +58,13 @@ func (by _By) Sort(seqs []sSS) {
func ISequenceSubChunk(iterator obiiter.IBioSequence,
classifier *obiseq.BioSequenceClassifier,
sizes ...int) (obiiter.IBioSequence, error) {
nworkers int) (obiiter.IBioSequence, error) {
bufferSize := iterator.BufferSize()
nworkers := 4
if len(sizes) > 0 {
nworkers = sizes[0]
if nworkers <=0 {
nworkers = 4
}
if len(sizes) > 1 {
bufferSize = sizes[1]
}
newIter := obiiter.MakeIBioSequence(bufferSize)
newIter := obiiter.MakeIBioSequence()
newIter.Add(nworkers)