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Refactoring codes for removing buffer size options. An some other changes...

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Former-commit-id: 10b57cc1a27446ade3c444217341e9651e89cdce
This commit is contained in:
Eric Coissac
2023-03-07 11:12:13 +07:00
parent 9811e440b8
commit d88de15cdc
52 changed files with 1172 additions and 421 deletions
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7
pkg/obiiter/distribute.go
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@ -36,7 +36,6 @@ func (dist *IDistribute) Classifier() *obiseq.BioSequenceClassifier {
func (iterator IBioSequence) Distribute(class *obiseq.BioSequenceClassifier, sizes ...int) IDistribute {
batchsize := 5000
buffsize := 2
outputs := make(map[int]IBioSequence, 100)
slices := make(map[int]*obiseq.BioSequenceSlice, 100)
@ -47,9 +46,7 @@ func (iterator IBioSequence) Distribute(class *obiseq.BioSequenceClassifier, siz
batchsize = sizes[0]
}
if len(sizes) > 1 {
buffsize = sizes[1]
}
jobDone := sync.WaitGroup{}
lock := sync.Mutex{}
@ -80,7 +77,7 @@ func (iterator IBioSequence) Distribute(class *obiseq.BioSequenceClassifier, siz
orders[key] = 0
lock.Lock()
outputs[key] = MakeIBioSequence(buffsize)
outputs[key] = MakeIBioSequence()
lock.Unlock()
news <- key