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Some code refactoring, a new version of obiuniq more efficient in memory and a first make file allowing to build obitools

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This commit is contained in:
Eric Coissac
2022-02-24 07:08:40 +01:00
parent 2e7c1834b0
commit eaf65fbcce
39 changed files with 1225 additions and 241 deletions
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9
pkg/obingslibrary/worker.go
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@ -1,6 +1,9 @@
package obingslibrary
import "git.metabarcoding.org/lecasofts/go/obitools/pkg/obiseq"
import (
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obiiter"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obiseq"
)
type _Options struct {
discardErrors bool
@ -167,7 +170,7 @@ func ExtractBarcodeSlice(ngslibrary NGSLibrary,
}
func ExtractBarcodeSliceWorker(ngslibrary NGSLibrary,
options ...WithOption) obiseq.SeqSliceWorker {
options ...WithOption) obiiter.SeqSliceWorker {
opt := MakeOptions(options)
@ -179,3 +182,5 @@ func ExtractBarcodeSliceWorker(ngslibrary NGSLibrary,
return worker
}