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Adds some stats in obiparing about fast align results

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Former-commit-id: 44f6d6538e759dd7dc1db068a812957f6b20f50d
This commit is contained in:
Eric Coissac
2023-11-24 10:57:10 +01:00
parent ce66b0af2f
commit ec31ae86b9
2 changed files with 5 additions and 4 deletions
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4
pkg/obialign/pairedendalign.go
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@ -352,7 +352,7 @@ func PERightAlign(seqA, seqB *obiseq.BioSequence, gap float64,
func PEAlign(seqA, seqB *obiseq.BioSequence,
gap float64, delta int,
arena PEAlignArena) (int, []int) {
arena PEAlignArena) (int, []int, int, int) {
var score, shift int
var startA, startB int
var partLen, over int
@ -467,5 +467,5 @@ func PEAlign(seqA, seqB *obiseq.BioSequence,
arena.pointer.path = append(arena.pointer.path, extra3, 0)
}
return score, arena.pointer.path
return score, arena.pointer.path, fastScore, over
}