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Code refactoring

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This commit is contained in:
Eric Coissac
2022-01-14 17:32:12 +01:00
parent 5753723618
commit ef66ca4972
16 changed files with 260 additions and 260 deletions
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20
pkg/obiseq/pairedbatchiterator.go
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@ -119,8 +119,8 @@ func (iterator IPairedBioSequenceBatch) Split() IPairedBioSequenceBatch {
buffer_size: iterator.pointer.buffer_size,
finished: false,
p_finished: iterator.pointer.p_finished}
new_iter := IPairedBioSequenceBatch{&i}
return new_iter
newIter := IPairedBioSequenceBatch{&i}
return newIter
}
func (iterator IPairedBioSequenceBatch) Next() bool {
@ -160,13 +160,13 @@ func (iterator IPairedBioSequenceBatch) SortBatches(sizes ...int) IPairedBioSequ
buffsize = sizes[0]
}
new_iter := MakeIPairedBioSequenceBatch(buffsize)
newIter := MakeIPairedBioSequenceBatch(buffsize)
new_iter.Add(1)
newIter.Add(1)
go func() {
new_iter.Wait()
close(new_iter.pointer.channel)
newIter.Wait()
close(newIter.pointer.channel)
}()
next_to_send := 0
@ -175,11 +175,11 @@ func (iterator IPairedBioSequenceBatch) SortBatches(sizes ...int) IPairedBioSequ
for iterator.Next() {
batch := iterator.Get()
if batch.order == next_to_send {
new_iter.pointer.channel <- batch
newIter.pointer.channel <- batch
next_to_send++
batch, ok := received[next_to_send]
for ok {
new_iter.pointer.channel <- batch
newIter.pointer.channel <- batch
delete(received, next_to_send)
next_to_send++
batch, ok = received[next_to_send]
@ -188,9 +188,9 @@ func (iterator IPairedBioSequenceBatch) SortBatches(sizes ...int) IPairedBioSequ
received[batch.order] = batch
}
}
new_iter.Done()
newIter.Done()
}()
return new_iter
return newIter
}