mirror of
https://github.com/metabarcoding/obitools4.git
synced 2025-06-29 16:20:46 +00:00
add an option alias -O for the old obi format
This commit is contained in:
131
Makefile
131
Makefile
@ -1,106 +1,53 @@
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MODULE = $(shell env GO111MODULE=on $(GO) list -m)
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DATE ?= $(shell date +%FT%T%z)
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VERSION ?= $(shell git describe --tags --always --dirty --match=v* 2> /dev/null || \
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cat $(CURDIR)/.version 2> /dev/null || echo v0)
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PKGS = $(or $(PKG),$(shell env GO111MODULE=on $(GO) list ./...))
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TESTPKGS = $(shell env GO111MODULE=on $(GO) list -f \
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'{{ if or .TestGoFiles .XTestGoFiles }}{{ .ImportPath }}{{ end }}' \
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$(PKGS))
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BIN = $(CURDIR)/bin
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GOCMD=go
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GOBUILD=$(GOCMD) build
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GOCLEAN=$(GOCMD) clean
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GOTEST=$(GOCMD) test
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GOGET=$(GOCMD) get
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GO = go
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TIMEOUT = 15
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V = 0
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Q = $(if $(filter 1,$V),,@)
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M = $(shell printf "\033[34;1m▶\033[0m")
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BUILD_DIR=build
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OBITOOLS_PREFIX:=g
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export GO111MODULE=on
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PACKAGES_SRC:= $(wildcard pkg/*/*.go pkg/*/*/*.go)
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PACKAGE_DIRS:=$(sort $(patsubst %/,%,$(dir $(PACKAGES_SRC))))
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PACKAGES:=$(notdir $(PACKAGE_DIRS))
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OBITOOLS_SRC:= $(wildcard cmd/obitools/*/*.go)
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OBITOOLS_DIRS:=$(sort $(patsubst %/,%,$(dir $(OBITOOLS_SRC))))
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OBITOOLS:=$(notdir $(OBITOOLS_DIRS))
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.PHONY: all
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all: fmt lint | $(BIN) ; $(info $(M) building executable…) @ ## Build program binary
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$Q $(GO) build \
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-tags release \
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-ldflags '-X $(MODULE)/cmd.Version=$(VERSION) -X $(MODULE)/cmd.BuildDate=$(DATE)' \
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-o $(BIN)/$(basename $(MODULE)) main.go
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# Tools
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define MAKE_PKG_RULE
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pkg-$(notdir $(1)): $(1)
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@echo -n - Building package $(notdir $(1))...
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@$(GOBUILD) ./$(1) \
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2> pkg-$(notdir $(1)).log \
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|| cat pkg-$(notdir $(1)).log
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@rm -f pkg-$(notdir $(1)).log
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@echo Done.
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endef
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$(BIN):
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@mkdir -p $@
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$(BIN)/%: | $(BIN) ; $(info $(M) building $(PACKAGE)…)
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$Q tmp=$$(mktemp -d); \
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env GO111MODULE=off GOPATH=$$tmp GOBIN=$(BIN) $(GO) get $(PACKAGE) \
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|| ret=$$?; \
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rm -rf $$tmp ; exit $$ret
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define MAKE_OBITOOLS_RULE
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$(OBITOOLS_PREFIX)$(notdir $(1)): $(BUILD_DIR) $(1)
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@echo -n - Building obitool $(notdir $(1))...
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@$(GOBUILD) -o $(BUILD_DIR)/$(OBITOOLS_PREFIX)$(notdir $(1)) ./$(1) \
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2> $(OBITOOLS_PREFIX)$(notdir $(1)).log \
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|| cat $(OBITOOLS_PREFIX)$(notdir $(1)).log
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@rm -f $(OBITOOLS_PREFIX)$(notdir $(1)).log
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@echo Done.
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endef
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GOLINT = $(BIN)/golint
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$(BIN)/golint: PACKAGE=golang.org/x/lint/golint
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GOCOV = $(BIN)/gocov
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$(BIN)/gocov: PACKAGE=github.com/axw/gocov/...
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all: obitools
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GOCOVXML = $(BIN)/gocov-xml
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$(BIN)/gocov-xml: PACKAGE=github.com/AlekSi/gocov-xml
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packages: $(patsubst %,pkg-%,$(PACKAGES))
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obitools: $(patsubst %,$(OBITOOLS_PREFIX)%,$(OBITOOLS))
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GO2XUNIT = $(BIN)/go2xunit
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$(BIN)/go2xunit: PACKAGE=github.com/tebeka/go2xunit
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$(BUILD_DIR):
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mkdir -p $@
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# Tests
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TEST_TARGETS := test-default test-bench test-short test-verbose test-race
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.PHONY: $(TEST_TARGETS) test-xml check test tests
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test-bench: ARGS=-run=__absolutelynothing__ -bench=. ## Run benchmarks
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test-short: ARGS=-short ## Run only short tests
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test-verbose: ARGS=-v ## Run tests in verbose mode with coverage reporting
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test-race: ARGS=-race ## Run tests with race detector
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$(TEST_TARGETS): NAME=$(MAKECMDGOALS:test-%=%)
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$(TEST_TARGETS): test
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check test tests: fmt lint ; $(info $(M) running $(NAME:%=% )tests…) @ ## Run tests
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$Q $(GO) test -timeout $(TIMEOUT)s $(ARGS) $(TESTPKGS)
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$(foreach P,$(PACKAGE_DIRS),$(eval $(call MAKE_PKG_RULE,$(P))))
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test-xml: fmt lint | $(GO2XUNIT) ; $(info $(M) running xUnit tests…) @ ## Run tests with xUnit output
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$Q mkdir -p test
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$Q 2>&1 $(GO) test -timeout $(TIMEOUT)s -v $(TESTPKGS) | tee test/tests.output
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$(GO2XUNIT) -fail -input test/tests.output -output test/tests.xml
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$(foreach P,$(OBITOOLS_DIRS),$(eval $(call MAKE_OBITOOLS_RULE,$(P))))
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COVERAGE_MODE = atomic
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COVERAGE_PROFILE = $(COVERAGE_DIR)/profile.out
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COVERAGE_XML = $(COVERAGE_DIR)/coverage.xml
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COVERAGE_HTML = $(COVERAGE_DIR)/index.html
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.PHONY: test-coverage test-coverage-tools
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test-coverage-tools: | $(GOCOV) $(GOCOVXML)
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test-coverage: COVERAGE_DIR := $(CURDIR)/test/coverage.$(shell date -u +"%Y-%m-%dT%H:%M:%SZ")
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test-coverage: fmt lint test-coverage-tools ; $(info $(M) running coverage tests…) @ ## Run coverage tests
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$Q mkdir -p $(COVERAGE_DIR)
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$Q $(GO) test \
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-coverpkg=$$($(GO) list -f '{{ join .Deps "\n" }}' $(TESTPKGS) | \
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grep '^$(MODULE)/' | \
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tr '\n' ',' | sed 's/,$$//') \
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-covermode=$(COVERAGE_MODE) \
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-coverprofile="$(COVERAGE_PROFILE)" $(TESTPKGS)
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$Q $(GO) tool cover -html=$(COVERAGE_PROFILE) -o $(COVERAGE_HTML)
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$Q $(GOCOV) convert $(COVERAGE_PROFILE) | $(GOCOVXML) > $(COVERAGE_XML)
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.PHONY: lint
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lint: | $(GOLINT) ; $(info $(M) running golint…) @ ## Run golint
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$Q $(GOLINT) -set_exit_status $(PKGS)
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.PHONY: fmt
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fmt: ; $(info $(M) running gofmt…) @ ## Run gofmt on all source files
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$Q $(GO) fmt $(PKGS)
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# Misc
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.PHONY: clean
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clean: ; $(info $(M) cleaning…) @ ## Cleanup everything
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@rm -rf $(BIN)
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@rm -rf test/tests.* test/coverage.*
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.PHONY: help
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help:
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@grep -hE '^[ a-zA-Z_-]+:.*?## .*$$' $(MAKEFILE_LIST) | \
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awk 'BEGIN {FS = ":.*?## "}; {printf "\033[36m%-17s\033[0m %s\n", $$1, $$2}'
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.PHONY: version
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version:
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@echo $(VERSION)
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