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First functional version of a blackboard and a blackboard based obicount

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This commit is contained in:
Eric Coissac
2024-07-31 23:16:45 +02:00
parent dfe2fc3d43
commit f36b39bfa3
40 changed files with 1236 additions and 257 deletions
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4
pkg/obiformats/fastseq_read.go
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@ -69,7 +69,7 @@ func _FastseqReader(source string,
slice = append(slice, rep)
ii++
if ii >= batch_size {
iterator.Push(obiiter.MakeBioSequenceBatch(i, slice))
iterator.Push(obiiter.MakeBioSequenceBatch(source, i, slice))
slice = obiseq.MakeBioSequenceSlice()
i++
ii = 0
@ -77,7 +77,7 @@ func _FastseqReader(source string,
}
if len(slice) > 0 {
iterator.Push(obiiter.MakeBioSequenceBatch(i, slice))
iterator.Push(obiiter.MakeBioSequenceBatch(source, i, slice))
}
iterator.Done()