18 Commits

Author SHA1 Message Date
e6b87ecd02 Reduce memory allocation events
Former-commit-id: fbdb2afc857b02adc2593e2278d3bd838e99b0b2
2024-06-22 21:01:53 +02:00
aa42df326a Correct a bug in the fastq reader affecting the quality of the last record of each chunk
Former-commit-id: b842d60af9c2f1f971946d99999d13cfc15793b3
2024-06-04 11:57:16 +02:00
55ce36f329 Update of obipcr and homogenization of logging
Former-commit-id: 46abf47c19ace5248042c02cf1f81d9f6c12eb10
2024-05-16 15:18:30 +02:00
8d77cc4133 Change path of the obitools pkg
Former-commit-id: 311cbf8df3b990b393c6f4885d62e74564423b65
2023-11-29 12:14:37 +01:00
3f8c0d6a2f Replace MakeBioSequence call by NewBioSequence call,
Implements a new file format guesser
Adds some more API doc


Former-commit-id: 9837bf1c28beca6ddb599b367f93548950ba83c1
2023-08-30 19:59:46 +02:00
dbf69b7da5 Patch a bug in obiseq.GetSlice
Former-commit-id: ab1a49c3d9bf19585e36842ecc15fa17afbcbf57
2023-04-07 17:44:11 +02:00
e863dc456a Add an option --pprof
Former-commit-id: 3ca1280e8daddbf1075e3189f9851211ce8882ae
2023-03-28 20:07:26 +07:00
988ae79989 Optimize memory allocation of the apat algorithms
Former-commit-id: 5010c5a666b322715b3b81c1078d325e1f647ede
2023-03-28 19:37:05 +07:00
d5e84ec676 rename goutils to obiutils
Former-commit-id: 2147f53db972bba571dfdae30c51b62d3e69cec5
2023-03-24 10:25:12 +07:00
18447e66a7 Patch a critical bug into the CopySlice function. 2022-11-16 09:24:17 +01:00
f8df48338d Several bug in annotation management 2022-10-12 23:01:47 +02:00
ebefa28cc0 Patch memory error related to []byte pool 2022-09-28 14:28:37 +02:00
2e7c1834b0 Big change iin the data model, and a first version of obiuniq 2022-02-21 19:00:23 +01:00
9737f97084 before big changes 2022-02-18 22:53:09 +01:00
8dbda68746 Adds the command obimultiplex 2022-02-01 17:31:28 +01:00
576a9f4d2d A global version of a Slice pool 2022-01-16 00:21:42 +01:00
e8fff6477b Work on iterators and recycling of biosequences 2022-01-14 23:11:36 +01:00
f53bf1b804 First commit 2022-01-13 23:27:39 +01:00