Commit Graph

9 Commits

Author SHA1 Message Date
017030bcce Add obiminion first version
Former-commit-id: aa5ace7bd4d2266333715fca7094d1c3cbbb5e6d
2024-05-14 08:16:12 +02:00
8d77cc4133 Change path of the obitools pkg
Former-commit-id: 311cbf8df3b990b393c6f4885d62e74564423b65
2023-11-29 12:14:37 +01:00
d5e84ec676 rename goutils to obiutils
Former-commit-id: 2147f53db972bba571dfdae30c51b62d3e69cec5
2023-03-24 10:25:12 +07:00
27d6c60e25 Add the possibility to look for patterns allowing indels.
Former-commit-id: 0599c2b0ad16df086dbdb08e491503870d8904be
2023-03-20 15:28:24 +07:00
20b16c0ba1 Force sequence reading to produce lowercase sequences.
Adds two columns to the obiclean ratio csv file
2022-11-22 15:06:09 +01:00
29563aa94e Rename the Length methods Len to follow GO standart 2022-11-17 11:09:58 +01:00
f674200a6e FastLCS with maxError=-1 is equivalent to FullLCS. 2022-11-16 09:57:36 +01:00
340579f6d7 New version of LCS computation, with abug on alignment length patched patched 2022-11-15 08:21:46 +01:00
0f99f9a6ba First trial of a fastest LCS implementation 2022-11-14 07:42:15 +01:00