10 Commits

Author	SHA1	Message	Date
Eric Coissac	6cb7a5a352	Changes to be committed: ... modified: cmd/obitools/obitag/main.go modified: cmd/obitools/obitaxonomy/main.go modified: pkg/obiformats/csvtaxdump_read.go modified: pkg/obiformats/ecopcr_read.go modified: pkg/obiformats/ncbitaxdump_read.go modified: pkg/obiformats/ncbitaxdump_readtar.go modified: pkg/obiformats/newick_write.go modified: pkg/obiformats/options.go modified: pkg/obiformats/taxonomy_read.go modified: pkg/obiformats/universal_read.go modified: pkg/obiiter/extract_taxonomy.go modified: pkg/obioptions/options.go modified: pkg/obioptions/version.go new file: pkg/obiphylo/tree.go modified: pkg/obiseq/biosequenceslice.go modified: pkg/obiseq/taxonomy_methods.go modified: pkg/obitax/taxonomy.go modified: pkg/obitax/taxonset.go modified: pkg/obitools/obiconvert/sequence_reader.go modified: pkg/obitools/obitag/obitag.go modified: pkg/obitools/obitaxonomy/obitaxonomy.go modified: pkg/obitools/obitaxonomy/options.go deleted: sample/.DS_Store	2025-06-04 09:48:10 +02:00
Eric Coissac	e2563cd8df	Patch a bug in registering merged taxa	2025-02-10 11:42:46 +01:00
Eric Coissac	0df082da06	Adds possibility to extract a taxonomy from taxonomic path included in sequence files	2025-01-30 11:18:21 +01:00
Eric Coissac	2452aef7a9	patch multiple -Z options	2025-01-29 21:35:28 +01:00
Eric Coissac	36327c79c8	Changes to be committed: ... modified: .gitignore new file: pkg/obitax/default_taxonomy.go modified: pkg/obitax/taxon.go modified: pkg/obitax/taxonnode.go modified: pkg/obitax/taxonomy.go modified: pkg/obitax/taxonset.go modified: pkg/obitax/taxonslice.go modified: pkg/obitools/obifind/iterator.go modified: pkg/obitools/obifind/options.go	2024-11-16 10:01:49 +01:00
Eric Coissac	f5d79d0bc4	update api documentation	2024-11-16 05:59:41 +01:00
Eric Coissac	03f4e88a17	Fisrt functional version	2024-11-14 19:10:23 +01:00
Eric Coissac	9471fedfa1	Fisrt step in the obitax rewriting	2024-11-08 09:48:16 +01:00
Eric Coissac	29563aa94e	Rename the Length methods Len to follow GO standart	2022-11-17 11:09:58 +01:00
Eric Coissac	f53bf1b804	First commit	2022-01-13 23:27:39 +01:00