Commit Graph

19 Commits

Author SHA1 Message Date
8d77cc4133 Change path of the obitools pkg
Former-commit-id: 311cbf8df3b990b393c6f4885d62e74564423b65
2023-11-29 12:14:37 +01:00
18d3eec24a Change the annotation locker to a pointer to mutex to avoid coying mutex
Former-commit-id: d179d8753b593183312bd11184e5d8ebb301138a
2023-08-27 16:00:35 +02:00
7b7128196a small refactoring including doc
Former-commit-id: 6d6b527d89d77aa571831f7500f841840e280536
2023-08-27 15:52:28 +02:00
60c187404d Restore old obisort and add LCA functionnality to obiannotate.
Former-commit-id: aecaacc9dae49f74bd888a8eb8140822d31a42a6
2023-05-02 10:43:22 +02:00
d5e84ec676 rename goutils to obiutils
Former-commit-id: 2147f53db972bba571dfdae30c51b62d3e69cec5
2023-03-24 10:25:12 +07:00
ed87f821eb adds the _taxid suffix to the rank taxid attributes. 2023-02-16 16:13:55 +01:00
5639a09fb9 Add the --with-taxon-at-rank option code to obiannotate 2023-02-02 16:36:32 +01:00
2d375df94f move the worker class to the obiseq package 2023-01-22 22:39:13 +01:00
29563aa94e Rename the Length methods Len to follow GO standart 2022-11-17 11:09:58 +01:00
8aa323dad5 Add a first version of obitag the successor of ecotag 2022-10-26 13:16:56 +02:00
6b8f4490cf Change obiclean algorithm for a better evaluation of ratio 2022-08-31 20:38:03 +02:00
abaede48b5 Refactoring of some code 2022-08-23 11:07:39 +02:00
011898bd9d A first version of obigrep. Normally fully functionnal, but not fully tested 2022-02-25 07:29:52 +01:00
abcf02e488 Start to use leveled log 2022-02-24 12:14:52 +01:00
2e7c1834b0 Big change iin the data model, and a first version of obiuniq 2022-02-21 19:00:23 +01:00
98a4363d22 obimultiplex saves unassigned sequence 2022-02-01 23:25:19 +01:00
ef66ca4972 Code refactoring 2022-01-14 17:32:12 +01:00
ff40222902 Code reefactoring 2022-01-14 16:10:19 +01:00
f53bf1b804 First commit 2022-01-13 23:27:39 +01:00