Commit Graph

20 Commits

Author SHA1 Message Date
d5e84ec676 rename goutils to obiutils
Former-commit-id: 2147f53db972bba571dfdae30c51b62d3e69cec5
2023-03-24 10:25:12 +07:00
27d6c60e25 Add the possibility to look for patterns allowing indels.
Former-commit-id: 0599c2b0ad16df086dbdb08e491503870d8904be
2023-03-20 15:28:24 +07:00
d88de15cdc Refactoring codes for removing buffer size options. An some other changes...
Former-commit-id: 10b57cc1a27446ade3c444217341e9651e89cdce
2023-03-07 11:12:13 +07:00
2d375df94f move the worker class to the obiseq package 2023-01-22 22:39:13 +01:00
29563aa94e Rename the Length methods Len to follow GO standart 2022-11-17 11:09:58 +01:00
f8df48338d Several bug in annotation management 2022-10-12 23:01:47 +02:00
f6735a634e Correctly patch the memory leak related to the apatsequence 2022-09-12 15:19:46 +02:00
5dd835d3e7 A first functional version of obiclean 2022-08-20 18:01:07 +02:00
abcf02e488 Start to use leveled log 2022-02-24 12:14:52 +01:00
eaf65fbcce Some code refactoring, a new version of obiuniq more efficient in memory and a first make file allowing to build obitools 2022-02-24 07:08:40 +01:00
2e7c1834b0 Big change iin the data model, and a first version of obiuniq 2022-02-21 19:00:23 +01:00
76d9309508 Remame PCR struct to PCRSim 2022-01-27 12:13:27 +01:00
b9da72d379 Adds finalizer to ApatSequence 2022-01-24 22:54:41 +01:00
251d3be923 Add automatic garbage collection on ApatPattern 2022-01-24 17:26:30 +01:00
4551df08b1 Adds a reader for NGS filter files and change some API for the apat library 2022-01-18 13:09:32 +01:00
e8fff6477b Work on iterators and recycling of biosequences 2022-01-14 23:11:36 +01:00
5753723618 Code refactoring 2022-01-14 17:17:54 +01:00
ff40222902 Code reefactoring 2022-01-14 16:10:19 +01:00
b9b9c0f179 Patch module name from oa2 to obitools 2022-01-13 23:43:01 +01:00
f53bf1b804 First commit 2022-01-13 23:27:39 +01:00