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d5e84ec676
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rename goutils to obiutils
Former-commit-id: 2147f53db972bba571dfdae30c51b62d3e69cec5
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2023-03-24 10:25:12 +07:00 |
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5fbe52368c
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Patch the empty batch bug
Former-commit-id: fcee04b58f2c4a0bf2c27792f991391c0b6ce78e
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2023-03-07 20:16:06 +07:00 |
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d88de15cdc
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Refactoring codes for removing buffer size options. An some other changes...
Former-commit-id: 10b57cc1a27446ade3c444217341e9651e89cdce
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2023-03-07 11:12:13 +07:00 |
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072b85e155
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change the model for representing paired reads and extend its usage to other commands
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2023-02-23 23:35:58 +01:00 |
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526bf79c7f
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Patch for some lost of data during sequence writing
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2023-02-08 13:14:26 +01:00 |
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2d375df94f
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move the worker class to the obiseq package
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2023-01-22 22:39:13 +01:00 |
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f97f92df72
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rename the iterator class
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2023-01-22 22:04:17 +01:00 |
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29563aa94e
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Rename the Length methods Len to follow GO standart
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2022-11-17 11:09:58 +01:00 |
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09fc426b67
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Refactoring related to iterators
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2022-11-16 17:13:03 +01:00 |
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6f853da9df
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Remove single sequence ierators. Only batch iterators persist
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2022-11-16 10:58:59 +01:00 |
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8aa323dad5
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Add a first version of obitag the successor of ecotag
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2022-10-26 13:16:56 +02:00 |
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7873b90902
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Patch a bug in obigrep...
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2022-10-02 20:52:26 +02:00 |
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d04161a0fb
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small code refactoring
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2022-08-23 15:08:35 +02:00 |
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eca1af9957
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Patch a bug on the FilterOn method
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2022-08-21 15:05:14 +02:00 |
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f00456fcf3
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Add a second way to merge several batch iterators using the pool method.
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2022-08-21 13:41:15 +02:00 |
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5dd835d3e7
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A first functional version of obiclean
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2022-08-20 18:01:07 +02:00 |
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6b13729eba
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Adds a test for not pushing empty batch on the output
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2022-06-14 09:53:35 +02:00 |
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f14860a486
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Patch header parting and formatiing
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2022-05-27 11:53:29 +03:00 |
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011898bd9d
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A first version of obigrep. Normally fully functionnal, but not fully tested
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2022-02-25 07:29:52 +01:00 |
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abcf02e488
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Start to use leveled log
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2022-02-24 12:14:52 +01:00 |
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eaf65fbcce
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Some code refactoring, a new version of obiuniq more efficient in memory and a first make file allowing to build obitools
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2022-02-24 07:08:40 +01:00 |
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