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e40d0bfbe7
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Debug fasta and fastq writer when the first sequence is hudge
Former-commit-id: d208ff838abb7e19e117067f6243298492d60f14
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2024-06-26 18:39:42 +02:00 |
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1835cb2cf3
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remove sonic which only works on AMD64
Former-commit-id: 5073957b4706b68896006ee0f7bc30e49ff72c3b
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2024-06-24 14:53:18 +02:00 |
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c1f03cb1f6
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Switch to faster json library go-json and sonic
Former-commit-id: ab9b4723f1dcf79fe5c073fff4d86f4f6969edfd
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2024-06-23 00:36:08 +02:00 |
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93f9dcb95f
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Reducing memory allocation events
Former-commit-id: c94e79ba116464504580fc397270ead154063971
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2024-06-22 22:32:31 +02:00 |
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e6b87ecd02
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Reduce memory allocation events
Former-commit-id: fbdb2afc857b02adc2593e2278d3bd838e99b0b2
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2024-06-22 21:01:53 +02:00 |
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54a138196c
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Patch a bug in fasta and fastq reading
Former-commit-id: bcaa264b4c4a7c67617eb909b199176bf09913db
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2024-06-21 14:28:57 +02:00 |
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818ce87bab
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Patch some bugs in writing files
Former-commit-id: 612868a281dc0ecf4e6c5776973735e5c71bd517
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2024-06-19 13:15:30 +02:00 |
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73996bb0b7
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Small change in consensus weight
Former-commit-id: 58bcc67044b82e4e1d9e0e52be336ae02ab248e9
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2024-06-19 09:11:59 +02:00 |
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a812fe8b72
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debug of obimultiplex
Former-commit-id: 1cf276840feb9d6135d96bd1bf63627d3085ae6e
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2024-06-18 23:38:33 +02:00 |
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44533fb61e
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Bugs in the non stric tag matching algorithm
Former-commit-id: efad98d6521322209ce22bc58fab54c7bddd19ec
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2024-06-10 21:19:26 +02:00 |
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3a7661f324
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obimultiplex2 in now obimultiplex
Former-commit-id: ee6f5e15a3f1729dfc2806d039c842c9c3bdd343
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2024-06-07 09:04:37 +02:00 |
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bc12b1aaa2
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Add a complete documented example of the new obitag format
Former-commit-id: 748a2357cc29aefd3bdee55c85c06eab31fb9fe1
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2024-06-06 23:44:23 +02:00 |
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e47b50de7f
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Patch a bug in seting of the tag delimiter with an upper case
Former-commit-id: a3962400b7ab91b25102c4c7c35cd824bf7ceaf0
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2024-06-06 23:25:16 +02:00 |
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1b43fa4247
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First complete version of obimultiplex2
Former-commit-id: 170593bd597c7914d3f1fd3d2b865186d7f11966
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2024-06-06 23:11:13 +02:00 |
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985c91452a
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correction of bug and format in obisplit
Former-commit-id: d600713a5f48c8d682971be9b8a09a1c021be28c
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2024-06-05 17:18:44 +02:00 |
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87a7219ab4
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Adds the reading of the options through the csv formated ngsfilter configuration file
Former-commit-id: 0e9a13689da2ba45293c7de1f728d3d0d34d3238
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2024-06-04 22:57:07 +02:00 |
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c8ad96f5e6
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First fonctionnal version with fixed tag length and strict matching
Former-commit-id: 5affee2c7c66dd1da5b17c2d1ea64f44db76df50
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2024-06-04 21:46:09 +02:00 |
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65f5109957
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Plenty of small bugs
Former-commit-id: 42c7fab7d65906c80ab4cd32da6867ff21842ea8
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2024-06-04 16:49:12 +02:00 |
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e843d2aa5c
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Patch a tricky bug in parsing of json header and save the last sequence from files
Former-commit-id: bfe3d0e9eb8e65113699d535bd1d9a5fe0d3ce1d
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2024-06-04 13:46:23 +02:00 |
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aa42df326a
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Correct a bug in the fastq reader affecting the quality of the last record of each chunk
Former-commit-id: b842d60af9c2f1f971946d99999d13cfc15793b3
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2024-06-04 11:57:16 +02:00 |
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411124d1b3
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Add automatic rules to manage version number
Former-commit-id: f4fcc1927f4169025c1d8cc88c5f3abcdc76037c
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2024-06-01 17:26:16 +02:00 |
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