Commit Graph

17 Commits

Author SHA1 Message Date
e6b87ecd02 Reduce memory allocation events
Former-commit-id: fbdb2afc857b02adc2593e2278d3bd838e99b0b2
2024-06-22 21:01:53 +02:00
54a138196c Patch a bug in fasta and fastq reading
Former-commit-id: bcaa264b4c4a7c67617eb909b199176bf09913db
2024-06-21 14:28:57 +02:00
818ce87bab Patch some bugs in writing files
Former-commit-id: 612868a281dc0ecf4e6c5776973735e5c71bd517
2024-06-19 13:15:30 +02:00
73996bb0b7 Small change in consensus weight
Former-commit-id: 58bcc67044b82e4e1d9e0e52be336ae02ab248e9
2024-06-19 09:11:59 +02:00
a812fe8b72 debug of obimultiplex
Former-commit-id: 1cf276840feb9d6135d96bd1bf63627d3085ae6e
2024-06-18 23:38:33 +02:00
44533fb61e Bugs in the non stric tag matching algorithm
Former-commit-id: efad98d6521322209ce22bc58fab54c7bddd19ec
2024-06-10 21:19:26 +02:00
3a7661f324 obimultiplex2 in now obimultiplex
Former-commit-id: ee6f5e15a3f1729dfc2806d039c842c9c3bdd343
2024-06-07 09:04:37 +02:00
bc12b1aaa2 Add a complete documented example of the new obitag format
Former-commit-id: 748a2357cc29aefd3bdee55c85c06eab31fb9fe1
2024-06-06 23:44:23 +02:00
e47b50de7f Patch a bug in seting of the tag delimiter with an upper case
Former-commit-id: a3962400b7ab91b25102c4c7c35cd824bf7ceaf0
2024-06-06 23:25:16 +02:00
1b43fa4247 First complete version of obimultiplex2
Former-commit-id: 170593bd597c7914d3f1fd3d2b865186d7f11966
2024-06-06 23:11:13 +02:00
985c91452a correction of bug and format in obisplit
Former-commit-id: d600713a5f48c8d682971be9b8a09a1c021be28c
2024-06-05 17:18:44 +02:00
87a7219ab4 Adds the reading of the options through the csv formated ngsfilter configuration file
Former-commit-id: 0e9a13689da2ba45293c7de1f728d3d0d34d3238
2024-06-04 22:57:07 +02:00
c8ad96f5e6 First fonctionnal version with fixed tag length and strict matching
Former-commit-id: 5affee2c7c66dd1da5b17c2d1ea64f44db76df50
2024-06-04 21:46:09 +02:00
65f5109957 Plenty of small bugs
Former-commit-id: 42c7fab7d65906c80ab4cd32da6867ff21842ea8
2024-06-04 16:49:12 +02:00
e843d2aa5c Patch a tricky bug in parsing of json header and save the last sequence from files
Former-commit-id: bfe3d0e9eb8e65113699d535bd1d9a5fe0d3ce1d
2024-06-04 13:46:23 +02:00
aa42df326a Correct a bug in the fastq reader affecting the quality of the last record of each chunk
Former-commit-id: b842d60af9c2f1f971946d99999d13cfc15793b3
2024-06-04 11:57:16 +02:00
411124d1b3 Add automatic rules to manage version number
Former-commit-id: f4fcc1927f4169025c1d8cc88c5f3abcdc76037c
2024-06-01 17:26:16 +02:00