Commit Graph

12 Commits

Author SHA1 Message Date
f5d79d0bc4 update api documentation 2024-11-16 05:59:41 +01:00
03f4e88a17 Fisrt functional version 2024-11-14 19:10:23 +01:00
9471fedfa1 Fisrt step in the obitax rewriting 2024-11-08 09:48:16 +01:00
54a138196c Patch a bug in fasta and fastq reading
Former-commit-id: bcaa264b4c4a7c67617eb909b199176bf09913db
2024-06-21 14:28:57 +02:00
b428c48353 Obitag, allow for reference sequences with bad taxid, which are discarded with the emission of a warning
Former-commit-id: a8781da1afa86de9c34b008959f0705ae69fc64f
2024-03-18 19:11:41 +01:00
0f3871d203 Change the API of workers
Former-commit-id: 9b07306edd8cf28266f86f95823948fa99d39ea9
2024-03-02 16:03:46 -04:00
b9a7961c91 Add more error checks on taxonomy reading
Former-commit-id: 30c848d8e61214afcc7d92f0d3a3f5a1474fc720
2023-12-14 08:09:06 +01:00
8d77cc4133 Change path of the obitools pkg
Former-commit-id: 311cbf8df3b990b393c6f4885d62e74564423b65
2023-11-29 12:14:37 +01:00
18d3eec24a Change the annotation locker to a pointer to mutex to avoid coying mutex
Former-commit-id: d179d8753b593183312bd11184e5d8ebb301138a
2023-08-27 16:00:35 +02:00
7b7128196a small refactoring including doc
Former-commit-id: 6d6b527d89d77aa571831f7500f841840e280536
2023-08-27 15:52:28 +02:00
60c187404d Restore old obisort and add LCA functionnality to obiannotate.
Former-commit-id: aecaacc9dae49f74bd888a8eb8140822d31a42a6
2023-05-02 10:43:22 +02:00
8aa323dad5 Add a first version of obitag the successor of ecotag 2022-10-26 13:16:56 +02:00