mirror of
https://github.com/metabarcoding/obitools4.git
synced 2025-06-29 16:20:46 +00:00
39 lines
879 B
Go
39 lines
879 B
Go
package main
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import (
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"log"
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"os"
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"runtime/trace"
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"git.metabarcoding.org/lecasofts/go/obitools/pkg/obioptions"
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"git.metabarcoding.org/lecasofts/go/obitools/pkg/obitools/obiconvert"
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"git.metabarcoding.org/lecasofts/go/obitools/pkg/obitools/obipcr"
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)
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func main() {
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// go tool pprof -http=":8000" ./obipairing ./cpu.pprof
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// f, err := os.Create("cpu.pprof")
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// if err != nil {
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// log.Fatal(err)
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// }
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// pprof.StartCPUProfile(f)
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// defer pprof.StopCPUProfile()
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// go tool trace cpu.trace
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ftrace, err := os.Create("cpu.trace")
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if err != nil {
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log.Fatal(err)
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}
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trace.Start(ftrace)
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defer trace.Stop()
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optionParser := obioptions.GenerateOptionParser(obipcr.OptionSet)
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_, args, _ := optionParser(os.Args)
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sequences, _ := obiconvert.ReadBioSequencesBatch(args...)
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amplicons, _ := obipcr.PCR(sequences)
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obiconvert.WriteBioSequencesBatch(amplicons, true)
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}
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