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25 lines
640 B
Go
25 lines
640 B
Go
package obiformats
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import (
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"strings"
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"git.metabarcoding.org/lecasofts/go/obitools/pkg/obiiter"
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"git.metabarcoding.org/lecasofts/go/obitools/pkg/obiseq"
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)
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func ParseGuessedFastSeqHeader(sequence *obiseq.BioSequence) {
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if strings.HasPrefix(sequence.Definition(), "{") {
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ParseFastSeqJsonHeader(sequence)
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} else {
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ParseFastSeqOBIHeader(sequence)
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}
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}
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func IParseFastSeqHeaderBatch(iterator obiiter.IBioSequenceBatch,
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options ...WithOption) obiiter.IBioSequenceBatch {
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opt := MakeOptions(options)
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return iterator.MakeIWorker(obiiter.AnnotatorToSeqWorker(opt.ParseFastSeqHeader()),
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opt.ParallelWorkers(),
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opt.BufferSize())
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}
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