2026-05-20 18:21:05 +02:00
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[package]
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name = "obikindex"
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version = "0.1.0"
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edition = "2024"
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[dependencies]
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2026-06-03 11:55:11 +02:00
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obikseq = { path = "../obikseq" }
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2026-08-13 10:21:54 +02:00
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obitaxonomy = { path = "../obitaxonomy" }
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2026-05-20 18:21:05 +02:00
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obiskio = { path = "../obiskio" }
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2026-05-20 21:01:16 +02:00
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obisys = { path = "../obisys" }
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2026-05-21 11:47:35 +02:00
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obicompactvec = { path = "../obicompactvec" }
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2026-08-20 13:49:06 +02:00
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obidebruinj = { path = "../obidebruinj" }
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obipipeline = { path = "../obipipeline" }
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obikentropy = { path = "../obikentropy" }
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2026-08-20 21:55:34 +02:00
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obiread = { path = "../obiread" }
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obiskbuilder = { path = "../obiskbuilder" }
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2026-08-20 13:49:06 +02:00
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cacheline-ef = "1.1"
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epserde = "0.8"
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ptr_hash = "1.1"
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niffler = "3.0.0"
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memmap2 = "0.9.10"
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2026-08-19 20:18:46 +02:00
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ndarray = "0.17"
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2026-06-13 11:32:12 +02:00
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rayon = "1"
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crossbeam-channel = "0.5"
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2026-05-20 18:21:05 +02:00
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serde = { version = "1", features = ["derive"] }
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serde_json = "1"
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2026-08-19 20:18:46 +02:00
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indicatif = "0.18"
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2026-05-20 18:21:05 +02:00
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tracing = "0.1.44"
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2026-08-20 21:55:34 +02:00
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bitvec = "1"
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sysinfo = "0.39"
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2026-06-23 08:50:18 +02:00
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hwlocality = { version = "1.0.0-alpha.11", features = ["vendored"], optional = true }
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2026-08-10 14:56:44 +02:00
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[dev-dependencies]
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2026-08-20 21:55:34 +02:00
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obikseq = { path = "../obikseq", features = ["test-utils"] }
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obikrope = { path = "../obikrope" }
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2026-08-10 14:56:44 +02:00
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tempfile = "3"
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2026-08-11 19:35:54 +02:00
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tracing-subscriber = { version = "0.3", features = ["fmt", "env-filter"] }
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2026-08-19 19:17:14 +02:00
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anyhow = "1"
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2026-08-10 14:56:44 +02:00
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2026-06-23 08:50:18 +02:00
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[features]
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default = ["numa"]
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numa = ["hwlocality"]
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