Introduce obikalgorithm crate to unify pipeline algorithms

Define a shared Algorithm trait with an associated Output type and a parameterless run(&mut self) method. Refactor PartitionRouter, Dereplicator, Counter, and LayerBuilder to implement the trait, standardizing receivers to &mut self and moving configuration and progress callbacks to dedicated builder setters. Decouple error handling using a generic boxed error type and update workspace dependencies accordingly.
2026-08-21 22:03:08 +02:00
parent 8d6ba6546b
commit 00ba968628
15 changed files with 401 additions and 146 deletions
@@ -18,7 +18,8 @@ rayon            = "1"
 tracing          = "0.1.44"

 [dev-dependencies]
-obiread     = { path = "../obiread" }
-obikindexer = { path = "../obikindexer" }
+obiread       = { path = "../obiread" }
+obikindexer   = { path = "../obikindexer" }
+obikalgorithm = { path = "../obikalgorithm" }
 tempfile = "3"
 tracing-subscriber = { version = "0.3", features = ["fmt", "env-filter"] }