Merge pull request 'ci: update registry auth and improve adaptive worker scaling' (#51) from push-qlpywtroutvx into main

Reviewed-on: #51
This commit was merged in pull request #51.
This commit is contained in:
2026-06-26 13:16:23 +00:00
4 changed files with 16 additions and 11 deletions
+5 -1
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@@ -86,7 +86,11 @@ jobs:
build-macos-arm64: build-macos-arm64:
needs: create-release needs: create-release
runs-on: ubuntu-latest runs-on: ubuntu-latest
container: registry.metabarcoding.org/cibuilder/rustcrossosx:latest container:
image: registry.metabarcoding.org/cibuilder/rustcrossosx:latest
credentials:
username: ${{ github.actor }}
password: ${{ secrets.REGISTRYTOKEN }}
defaults: defaults:
run: run:
working-directory: src working-directory: src
+1 -1
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@@ -1704,7 +1704,7 @@ dependencies = [
[[package]] [[package]]
name = "obikmer" name = "obikmer"
version = "1.1.26" version = "1.1.27"
dependencies = [ dependencies = [
"clap", "clap",
"csv", "csv",
+9 -8
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@@ -287,8 +287,9 @@ impl PartitionRunner {
drop(event_tx); drop(event_tx);
// ── Controller ──────────────────────────────────────────────────── // ── Controller ────────────────────────────────────────────────────
activate_tx.send(()).ok(); let initial_workers = n_nodes.min(max_workers).min(n_total);
let mut n_active = 1usize; for _ in 0..initial_workers { activate_tx.send(()).ok(); }
let mut n_active = initial_workers;
let mut cpu_sample = CpuSample::now(); let mut cpu_sample = CpuSample::now();
let mut eff_at_last_spawn = 0.0f64; // 0 = no previous spawn to evaluate let mut eff_at_last_spawn = 0.0f64; // 0 = no previous spawn to evaluate
let mut completed = 0usize; let mut completed = 0usize;
@@ -361,13 +362,13 @@ fn maybe_activate(
// Going from k-1 → k workers, the minimum acceptable speedup is (k-1+0.2)/(k-1). // Going from k-1 → k workers, the minimum acceptable speedup is (k-1+0.2)/(k-1).
// For the very first extra worker (n_active == 1, no previous spawn), skip this // For the very first extra worker (n_active == 1, no previous spawn), skip this
// check: eff_at_last_spawn == 0 acts as the sentinel. // check: eff_at_last_spawn == 0 acts as the sentinel.
let last_spawn_was_beneficial = if *eff_at_last_spawn < 1e-9 { let last_spawn_was_beneficial = if *eff_at_last_spawn < 1e-9 || eff < 1e-9 {
true // first additional worker: no prior data to evaluate true // first additional worker, or measurement too short: no prior data to evaluate
} else { } else {
let k_before = (*n_active - 1) as f64; let k_new = *n_active as f64; // worker count after the last spawn
let min_speedup = (k_before + 0.2) / k_before; let min_gain = 0.2 / k_new;
let actual_speedup = eff / *eff_at_last_spawn; let actual_gain = (eff - *eff_at_last_spawn) / eff;
actual_speedup >= min_speedup actual_gain >= min_gain
}; };
if last_spawn_was_beneficial { if last_spawn_was_beneficial {
+1 -1
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@@ -1,6 +1,6 @@
[package] [package]
name = "obikmer" name = "obikmer"
version = "1.1.26" version = "1.1.27"
edition = "2024" edition = "2024"
[[bin]] [[bin]]