large refactoring
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@@ -121,5 +121,6 @@ obikmer phylo index/ > distances.tsv
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## Documentation
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Extended architecture and implementation notes are in `docmd/`. Build with
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`make doc` (requires Python + MkDocs Material).
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Extended architecture and implementation notes are in `DevDocMD/`. Build with
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`make doc` (requires Python + MkDocs Material). User-facing documentation is
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in `UserDocMD/`, built with `make doc-user`.
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