feat: support exact and approximate evidence in layer construction
Refactored `MphfLayer::build` to accept an `EvidenceKind` parameter, routing to exact (index-based, parallel MPHF, writes `evidence.bin`) or approximate (sequential mmap iterator, writes `fingerprint.bin`) pipelines. Introduced `CanonicalKmerIter` for memory-mapped, chunked k-mer iteration with O(1) resets via `Arc<Mmap>`. Updated layer and map APIs to forward evidence kind, added `push_layer` for count matrices, and adjusted tests and public exports accordingly.
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@@ -8,7 +8,7 @@ use obicompactvec::{PersistentBitMatrixBuilder,
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PersistentCompactIntVecBuilder};
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use obidebruinj::GraphDeBruijn;
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use obiskio::{SKError, SKResult, UnitigFileReader};
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use obilayeredmap::{Layer, MphfLayer, OLMError};
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use obilayeredmap::{EvidenceKind, Layer, MphfLayer, OLMError};
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use obilayeredmap::meta::PartitionMeta;
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use crate::filter::KmerFilter;
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@@ -146,7 +146,7 @@ impl KmerPartition {
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uw.close()?;
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drop(g);
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Layer::<()>::build(&dst_layer_dir, block_bits).map_err(olm_to_sk)?;
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Layer::<()>::build(&dst_layer_dir, block_bits, &EvidenceKind::Exact).map_err(olm_to_sk)?;
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let dst_mphf = MphfLayer::open(&dst_layer_dir).map_err(olm_to_sk)?;
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// ── Prepare matrix builders (one column per genome) ───────────────────
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