Consolidate compare_sparse as example and clean up project artifacts

Restructure the project by moving the standalone compare_sparse utility into an example directory, removing Sankoff parameter configurations and benchmark scripts, updating version control ignores, and expanding the test suite with diagnostic checks and performance benchmarks.

This commit is contained in:

Eric Coissac

2026-08-20 12:48:42 +02:00

parent dc3d82f8db

commit dbd8af376c

13 changed files with 12 additions and 1184 deletions

.gitignore

View File

@@ -1,4 +1,5 @@
 .venv/
 .DS_Store
 src/target
 data-stress
 *.fasta