ci: update registry auth and improve adaptive worker scaling

Refactor the release workflow to use a structured container object with authenticated pulls for macOS ARM64 builds. Replace single-worker activation with dynamic upfront provisioning based on node and worker counts. Implement an absolute efficiency gain threshold for scaling checks and add early termination to improve adaptive scaling stability. Bump obikmer crate version to 1.1.27.

.gitea/workflows/release.yml

@@ -86,18 +86,17 @@ jobs:
   build-macos-arm64:
     needs: create-release
     runs-on: ubuntu-latest
-    container: joseluisq/rust-linux-darwin-builder:latest
+    container:
+      image: registry.metabarcoding.org/cibuilder/rustcrossosx:latest
+      credentials:
+        username: ${{ github.actor }}
+        password: ${{ secrets.REGISTRYTOKEN }}
     defaults:
       run:
         working-directory: src
     steps:
       - uses: actions/checkout@v4
 
-      - name: Add target and install jq
-        run: |
-          rustup target add aarch64-apple-darwin
-          apt-get update -qq && apt-get install -y -qq jq
-
       - name: Cache cargo registry
         uses: actions/cache@v4
         with:
@@ -109,11 +108,7 @@ jobs:
           restore-keys: macos-arm64-cargo-
 
       - name: Build macOS binary
-        env:
-          CC: aarch64-apple-darwin22.4-clang
-          CXX: aarch64-apple-darwin22.4-clang++
-          CARGO_TARGET_AARCH64_APPLE_DARWIN_LINKER: aarch64-apple-darwin22.4-clang
-        run: cargo build --release --target aarch64-apple-darwin
+        run: cargo build --release --target aarch64-apple-darwin --no-default-features
 
       - name: Prepare and upload artifact
         env:

src/Cargo.lock

@@ -1704,7 +1704,7 @@ dependencies = [
 
 [[package]]
 name = "obikmer"
-version = "1.1.25"
+version = "1.1.27"
 dependencies = [
  "clap",
  "csv",

src/obikindex/src/numa.rs

@@ -287,8 +287,9 @@ impl PartitionRunner {
             drop(event_tx);
 
             // ── Controller ────────────────────────────────────────────────────
-            activate_tx.send(()).ok();
-            let mut n_active              = 1usize;
+            let initial_workers = n_nodes.min(max_workers).min(n_total);
+            for _ in 0..initial_workers { activate_tx.send(()).ok(); }
+            let mut n_active              = initial_workers;
             let mut cpu_sample            = CpuSample::now();
             let mut eff_at_last_spawn     = 0.0f64; // 0 = no previous spawn to evaluate
             let mut completed             = 0usize;
@@ -361,13 +362,13 @@ fn maybe_activate(
     // Going from k-1 → k workers, the minimum acceptable speedup is (k-1+0.2)/(k-1).
     // For the very first extra worker (n_active == 1, no previous spawn), skip this
     // check: eff_at_last_spawn == 0 acts as the sentinel.
-    let last_spawn_was_beneficial = if *eff_at_last_spawn < 1e-9 {
-        true  // first additional worker: no prior data to evaluate
+    let last_spawn_was_beneficial = if *eff_at_last_spawn < 1e-9 || eff < 1e-9 {
+        true  // first additional worker, or measurement too short: no prior data to evaluate
     } else {
-        let k_before   = (*n_active - 1) as f64;
-        let min_speedup = (k_before + 0.2) / k_before;
-        let actual_speedup = eff / *eff_at_last_spawn;
-        actual_speedup >= min_speedup
+        let k_new = *n_active as f64;  // worker count after the last spawn
+        let min_gain = 0.2 / k_new;
+        let actual_gain = (eff - *eff_at_last_spawn) / eff;
+        actual_gain >= min_gain
     };
 
     if last_spawn_was_beneficial {

src/obikmer/Cargo.toml

@@ -1,6 +1,6 @@
 [package]
 name = "obikmer"
-version = "1.1.25"
+version = "1.1.27"
 edition = "2024"
 
 [[bin]]