chore: update ci cache, document distance metrics, and bump version #64

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coissac merged 1 commits from push-wpxsvyylwmsq into main 2026-08-11 15:17:43 +00:00
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Updated CI workflow cache keys with a v2 salt and Cargo.lock hash to prevent stale incremental compilation caches and deadlocks, while updating restore keys and documenting interrupted job state. Introduced a 3-way ordinal distance metric framework that replaces ambiguous IUPAC encoding with explicit k-mer scoring, bridging pairwise methods to character-based phylogenetics via Sankoff parsimony. Bumped the obikmer crate version to 1.1.42.

Updated CI workflow cache keys with a `v2` salt and `Cargo.lock` hash to prevent stale incremental compilation caches and deadlocks, while updating restore keys and documenting interrupted job state. Introduced a 3-way ordinal distance metric framework that replaces ambiguous IUPAC encoding with explicit k-mer scoring, bridging pairwise methods to character-based phylogenetics via Sankoff parsimony. Bumped the `obikmer` crate version to 1.1.42.
coissac added 1 commit 2026-08-11 15:17:37 +00:00
chore: update ci cache, document distance metrics, and bump version
Release / create-release (push) Successful in 2m26s
Release / build-linux-x86_64 (push) Successful in 8m43s
Release / build-macos-arm64 (push) Successful in 2m7s
ci.yml / build (pull_request) Canceled after 59m15s
a63692b8c4
Updated CI workflow cache keys with a `v2` salt and `Cargo.lock` hash to prevent stale incremental compilation caches and deadlocks, while updating restore keys and documenting interrupted job state. Introduced a 3-way ordinal distance metric framework that replaces ambiguous IUPAC encoding with explicit k-mer scoring, bridging pairwise methods to character-based phylogenetics via Sankoff parsimony. Bumped the `obikmer` crate version to 1.1.42.
coissac merged commit 442f7a9e4c into main 2026-08-11 15:17:43 +00:00
coissac deleted branch push-wpxsvyylwmsq 2026-08-11 15:17:43 +00:00
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Reference: OBIKmers/obikmer#64