Eric Coissac 00b4b1fa51 docs: add future work section for parallel gzip decompression ...

Proposes replacing the single-threaded niffler/flate2 pipeline in `obiread::xopen` with `rapidgzip-rs` for local `.gz` files. Details constraints such as path dependencies, non-seekable streams, C++ toolchain requirements, and binding maturity. Marks the optimization as parked pending throughput and correctness validation.

2026-07-07 13:43:01 +02:00

..

architecture

feat: filter zero-valued entries from kmer strict matches output

2026-07-07 10:50:01 +02:00

css

first implementation but far to be optimal

2026-04-19 12:17:16 +02:00

implementation

docs: add future work section for parallel gzip decompression

2026-07-07 13:43:01 +02:00

theory

refactor: update core types and add approximate evidence support

2026-05-26 10:04:25 +02:00

apa.csl

first implementation but far to be optimal

2026-04-19 12:17:16 +02:00

ecology-letters.csl

first implementation but far to be optimal

2026-04-19 12:17:16 +02:00

index.md

refactor: rename rebuild subcommand to filter

2026-06-09 15:26:37 +02:00

index.refs.md

docs: add coverage reference files and flag architectural drift

2026-05-23 13:44:23 +02:00

installation.md

refactor: replace rayon with NUMA-aware PartitionRunner

2026-06-15 18:53:31 +02:00

kmers.md

feat: enforce runtime validation for kmer and minimizer parameters

2026-05-29 09:10:25 +02:00

kmers.refs.md

docs: add coverage reference files and flag architectural drift

2026-05-23 13:44:23 +02:00

references.bib

first implementation but far to be optimal

2026-04-19 12:17:16 +02:00

vancouver.csl

first implementation but far to be optimal

2026-04-19 12:17:16 +02:00