Eric Coissac 4fc7860825 feat: filter zero-valued entries from kmer strict matches output ...

Optimize query serialization by conditionally excluding genomes with zero total matches. This reduces JSON payload size while preserving the label-to-count mapping structure. Updates architecture documentation and bumps version to 1.1.36.

2026-07-07 10:50:01 +02:00

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architecture

feat: filter zero-valued entries from kmer strict matches output

2026-07-07 10:50:01 +02:00

css

first implementation but far to be optimal

2026-04-19 12:17:16 +02:00

implementation

feat: introduce obitaxonomy crate for hierarchical taxonomy parsing

2026-06-22 10:24:04 +02:00

theory

refactor: update core types and add approximate evidence support

2026-05-26 10:04:25 +02:00

apa.csl

first implementation but far to be optimal

2026-04-19 12:17:16 +02:00

ecology-letters.csl

first implementation but far to be optimal

2026-04-19 12:17:16 +02:00

index.md

refactor: rename rebuild subcommand to filter

2026-06-09 15:26:37 +02:00

index.refs.md

docs: add coverage reference files and flag architectural drift

2026-05-23 13:44:23 +02:00

installation.md

refactor: replace rayon with NUMA-aware PartitionRunner

2026-06-15 18:53:31 +02:00

kmers.md

feat: enforce runtime validation for kmer and minimizer parameters

2026-05-29 09:10:25 +02:00

kmers.refs.md

docs: add coverage reference files and flag architectural drift

2026-05-23 13:44:23 +02:00

references.bib

first implementation but far to be optimal

2026-04-19 12:17:16 +02:00

vancouver.csl

first implementation but far to be optimal

2026-04-19 12:17:16 +02:00