Eric Coissac
8c17bf958b
Centralize k-mer and minimizer configuration using a thread-safe global module, and replace manual bit-packing with a memory-efficient `PackedSeq` type. Refactor core sequence and k-mer types to use compile-time length enforcement and centralized hashing. Introduce a new De Bruijn graph implementation with compact node encoding and traversal iterators. Update I/O, partitioning, and builder modules to align with the new architecture, and add the `xxhash-rust` dependency.
12 lines
254 B
TOML
12 lines
254 B
TOML
[package]
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name = "obifastwrite"
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version = "0.1.0"
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edition = "2024"
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[dependencies]
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obikseq = { path = "../obikseq" }
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xxhash-rust = { version = "0.8", features = ["xxh64"] }
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[dev-dependencies]
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obikseq = { path = "../obikseq", features = ["test-utils"] }
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