Eric Coissac
bfe0cb4b82
This change adds the `obikseq` crate as a local dependency and inserts `set_k` and `set_m` calls across index creation and command modules. By synchronizing the runtime's global k-mer and minimizer dimensions with the loaded index parameters, downstream sequence processing and partitioning operations now consistently use the correct structural constraints.
19 lines
544 B
TOML
19 lines
544 B
TOML
[package]
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name = "obikindex"
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version = "0.1.0"
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edition = "2024"
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[dependencies]
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obikseq = { path = "../obikseq" }
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obikpartitionner = { path = "../obikpartitionner" }
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obiskio = { path = "../obiskio" }
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obisys = { path = "../obisys" }
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obicompactvec = { path = "../obicompactvec" }
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obilayeredmap = { path = "../obilayeredmap" }
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ndarray = "0.16"
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rayon = "1"
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serde = { version = "1", features = ["derive"] }
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serde_json = "1"
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indicatif = "0.17"
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tracing = "0.1.44"
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