Commit Graph

993 Commits

Author SHA1 Message Date
da4ba3f5b1 A first version of obiselect a new obitools for selecting a subset of sequences from a database 2012-05-15 13:23:10 +00:00
c79d858427 Add a new script selfecotag for checking reference database 2012-05-11 14:08:09 +00:00
8f6a083c8c Add new algorithm in EcoTag to reduce impact of database errors 2012-05-09 07:19:13 +00:00
19d7f08f17 Add new algorithm in EcoTag to reduce impact of database errors 2012-05-08 22:34:30 +00:00
5205b9e478 Add new algorithm in EcoTag to reduce impact of database errors 2012-05-08 18:31:37 +00:00
657b3e33a8 Patch a bug in ecoTag 2012-05-08 05:10:02 +00:00
5c917133b9 Patch a bug in ecoTag 2012-05-07 20:28:36 +00:00
da92eca1cc Pacth a bug in LCS upperbond 2012-05-07 09:53:43 +00:00
921eff27bf Pacth a bug in LCS upperbond 2012-05-07 09:13:34 +00:00
Lucie Zinger
133c00f87f test lucie 2012-05-04 14:52:07 +00:00
42cffe6264 Setup the documentation for the new version 0.2.400 of obitools 2012-05-04 12:47:03 +00:00
8e7aa4217f Setup the documentation for the new version 0.2.400 of obitools 2012-05-04 12:41:41 +00:00
d137794c4b Setup the documentation for the new version 0.2.400 of obitools 2012-05-04 12:32:07 +00:00
3775ae287a Setup the documentation for the new version 0.2.400 of obitools 2012-05-04 12:20:41 +00:00
619e9b762b Setup the documentation for the new version 0.2.400 of obitools 2012-05-04 12:19:17 +00:00
15298aa680 Setup the documentation for the new version 0.2.400 of obitools 2012-05-04 12:14:21 +00:00
b85b10f03b Setup the documentation for the new version 0.2.400 of obitools 2012-05-04 12:04:55 +00:00
a12bee7067 patch the installer for easy_install and pip 2012-05-03 21:04:53 +00:00
34389657a6 Try to generate documentation on commit 2012-05-03 19:07:57 +00:00
6f3c0f8e3f test 2012-05-03 19:05:52 +00:00
d88643de38 new try 2012-05-03 19:04:50 +00:00
2dda3bd4fc new try 2012-05-03 19:00:13 +00:00
cfb9a21597 test 2012-05-03 18:59:00 +00:00
dd22d8b991 new try 2012-05-03 18:52:20 +00:00
041fb51fd6 new try 2012-05-03 18:49:00 +00:00
1ae0d36e8b test 2012-05-03 18:46:55 +00:00
b1be4f9ce4 test 2012-05-03 17:43:26 +00:00
1754ba834a new try 2012-05-03 17:31:32 +00:00
a69cecd110 new try 2012-05-03 17:22:04 +00:00
c4235fa955 new try 2012-05-03 17:18:14 +00:00
a96c045668 new try 2012-05-03 17:14:53 +00:00
f038eb700b Try to generate documentation on commit 2012-05-03 17:10:28 +00:00
54c5bfad38 Try to generate documentation on commit bis 2012-05-03 17:03:33 +00:00
5331595cce Try to generate documentation on commit bis 2012-05-03 17:02:07 +00:00
8ca17ce89c Try to generate documentation on commit 2012-05-03 16:55:11 +00:00
a9ae922d25 Supress unused import 2012-05-03 16:30:46 +00:00
57381d1348 Test commit on OBITools 2012-05-01 14:48:36 +00:00
451e63d922 Test commit on OBITools 2012-05-01 14:45:28 +00:00
9cc954ffe0 test hhok 2012-04-29 14:45:07 +00:00
1ee8700324 Add input and output options to solexaPairEnd 2012-04-25 12:42:06 +00:00
154e50ed43 Patch of several bugs related to the Cython switch 2012-04-25 12:16:07 +00:00
8134d8fbfd Add input and output options to solexaPairEnd 2012-04-25 11:05:06 +00:00
6a45d563d4 Add input and output options to solexaPairEnd 2012-04-25 10:53:18 +00:00
f3e6c41c56 Add input and output options to solexaPairEnd 2012-04-25 10:52:57 +00:00
e37bef2eab bug about the progressbar on large files 2012-04-25 10:22:15 +00:00
e82c03a4ad add math module in the obiannotate environment 2012-04-25 09:20:30 +00:00
f7753ec2e5 bug about the progressbar on large files 2012-04-25 09:05:37 +00:00
f15f13a4c8 A big jump into cython for increasing speed
==> checked with cython 1.6
2012-04-25 05:59:15 +00:00
155a43b1ef A big jump into cython for increasing speed
==> checked with cython 1.6
2012-04-25 05:58:48 +00:00
1f5fcd8025 Test for a new version of the ecoTag sequence Matcher 2012-04-17 12:40:25 +00:00