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Refactoring related to iterators

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This commit is contained in:
Eric Coissac
2022-11-16 17:13:03 +01:00
parent 6f853da9df
commit 09fc426b67
29 changed files with 95 additions and 93 deletions
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9
cmd/obitools/obimultiplex/main.go
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@@ -1,10 +1,11 @@
package main
import (
log "github.com/sirupsen/logrus"
"os"
"runtime/pprof"
log "github.com/sirupsen/logrus"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obioptions"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obitools/obiconvert"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obitools/obimultiplex"
@@ -30,8 +31,8 @@ func main() {
_, args, _ := optionParser(os.Args)
sequences, _ := obiconvert.ReadBioSequencesBatch(args...)
amplicons, _ := obimultiplex.IExtractBarcodeBatches(sequences)
obiconvert.WriteBioSequencesBatch(amplicons, true)
sequences, _ := obiconvert.ReadBioSequences(args...)
amplicons, _ := obimultiplex.IExtractBarcode(sequences)
obiconvert.WriteBioSequences(amplicons, true)
amplicons.Wait()
}