mirror of
https://github.com/metabarcoding/obitools4.git
synced 2025-12-10 01:30:27 +00:00
Adds possibility to extract a taxonomy from taxonomic path included in sequence files
This commit is contained in:
@@ -134,7 +134,12 @@ func LoadNCBITarTaxDump(path string, onlysn bool) (*Taxonomy, error) {
|
||||
n = loadMergedTable(buffered, taxonomy)
|
||||
log.Printf("%d merged taxa read\n", n)
|
||||
|
||||
root := taxonomy.Taxon("1")
|
||||
root, err := taxonomy.Taxon("1")
|
||||
|
||||
if err != nil {
|
||||
log.Fatal("cannot find the root taxon (1) in the NCBI tax dump")
|
||||
}
|
||||
|
||||
taxonomy.SetRoot(root)
|
||||
|
||||
return taxonomy, nil
|
||||
|
||||
Reference in New Issue
Block a user