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Add some code refactoring from the blackboard branch

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Eric Coissac
2024-08-02 12:35:46 +02:00
parent bc1aaaf7d9
commit 1b1cd41fd3
38 changed files with 491 additions and 330 deletions
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4
pkg/obitools/obilandmark/obilandmark.go
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@@ -103,7 +103,7 @@ func MapOnLandmarkSequences(library obiseq.BioSequenceSlice, landmark_idx []int,
// which landmark it corresponds.
func CLISelectLandmarkSequences(iterator obiiter.IBioSequence) obiiter.IBioSequence {
library := iterator.Load()
source, library := iterator.Load()
library_size := len(library)
n_landmark := CLINCenter()
@@ -191,6 +191,6 @@ func CLISelectLandmarkSequences(iterator obiiter.IBioSequence) obiiter.IBioSeque
}
}
return obiiter.IBatchOver(library, obioptions.CLIBatchSize())
return obiiter.IBatchOver(source, library, obioptions.CLIBatchSize())
}