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Bugs in the non stric tag matching algorithm

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Former-commit-id: efad98d6521322209ce22bc58fab54c7bddd19ec
This commit is contained in:
Eric Coissac
2024-06-10 21:19:26 +02:00
parent 2d4813614b
commit 44533fb61e
3 changed files with 25 additions and 26 deletions
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4
pkg/obitools/obimultiplex/demultiplex.go
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@@ -35,13 +35,13 @@ func IExtractBarcode(iterator obiiter.IBioSequence) (obiiter.IBioSequence, error
if !CLIConservedErrors() {
log.Infoln("Discards unassigned sequences")
out = out.FilterOn(obiseq.HasAttribute("demultiplex_error").Not(), obioptions.CLIBatchSize())
out = out.FilterOn(obiseq.HasAttribute("obimultiplex_error").Not(), obioptions.CLIBatchSize())
}
var unidentified obiiter.IBioSequence
if CLIUnidentifiedFileName() != "" {
log.Printf("Unassigned sequences saved in file: %s\n", CLIUnidentifiedFileName())
unidentified, out = newIter.DivideOn(obiseq.HasAttribute("demultiplex_error"),
unidentified, out = newIter.DivideOn(obiseq.HasAttribute("obimultiplex_error"),
obioptions.CLIBatchSize())
go func() {