Adds the --silent-warning options to the obitools commands and removes the --pared-with option from some of the obitols commands.

pkg/obitools/obiscript/options.go

@@ -26,7 +26,7 @@ func ScriptOptionSet(options *getoptions.GetOpt) {
 
 func OptionSet(options *getoptions.GetOpt) {
 	ScriptOptionSet(options)
-	obiconvert.OptionSet(options)
+	obiconvert.OptionSet(false)(options)
 	obigrep.SequenceSelectionOptionSet(options)
 }