Patch rev complement and first implementation of --auto in obicsv

Former-commit-id: f3020e81283b1073c4d1c2d2ff0887e3998e6764
This commit is contained in:
2023-11-07 09:37:07 +02:00
parent 6a6a6f6f2c
commit 61c30f9b6a
21 changed files with 270 additions and 107 deletions

View File

@@ -234,7 +234,7 @@ func ParseFastaChunk(source string, ch FastxChunk) *obiiter.BioSequenceBatch {
C = C + 'a' - 'A'
}
// Removing white space from the sequence
if (C >= 'a' && C <= 'z') || C == '-' || C == '.' {
if (C >= 'a' && C <= 'z') || C == '-' || C == '.' || C == '[' || C == ']' {
ch.Bytes[current] = C
current++
}