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small refactoring including doc

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Former-commit-id: 6d6b527d89d77aa571831f7500f841840e280536
This commit is contained in:
Eric Coissac
2023-08-27 15:52:28 +02:00
parent f1025f97b8
commit 7b7128196a
4 changed files with 17 additions and 8 deletions
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8
pkg/obitools/obiclean/obiclean.go
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@@ -106,7 +106,7 @@ func IsHead(sequence *obiseq.BioSequence) bool {
case bool:
ishead = iishead
default:
log.Panic("obiclean_head attribute of sequence %s must be a boolean not : %v", sequence.Id(), iishead)
log.Panicf("obiclean_head attribute of sequence %s must be a boolean not : %v", sequence.Id(), iishead)
}
}
@@ -122,7 +122,7 @@ func HeadCount(sequence *obiseq.BioSequence) int {
if ok {
value, err = obiutils.InterfaceToInt(value)
if err != nil {
log.Panic("obiclean_headcount attribute of sequence %s must be an integer value not : %v", sequence.Id(), ivalue)
log.Panicf("obiclean_headcount attribute of sequence %s must be an integer value not : %v", sequence.Id(), ivalue)
}
}
@@ -138,7 +138,7 @@ func InternalCount(sequence *obiseq.BioSequence) int {
if ok {
value, err = obiutils.InterfaceToInt(value)
if err != nil {
log.Panic("obiclean_internalcount attribute of sequence %s must be an integer value not : %v", sequence.Id(), ivalue)
log.Panicf("obiclean_internalcount attribute of sequence %s must be an integer value not : %v", sequence.Id(), ivalue)
}
}
@@ -154,7 +154,7 @@ func SingletonCount(sequence *obiseq.BioSequence) int {
if ok {
value, err = obiutils.InterfaceToInt(value)
if err != nil {
log.Panic("obiclean_samplecount attribute of sequence %s must be an integer value not : %v", sequence.Id(), ivalue)
log.Panicf("obiclean_samplecount attribute of sequence %s must be an integer value not : %v", sequence.Id(), ivalue)
}
}