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Patch a bug in the help messages

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Former-commit-id: 61ffea65db66215c072139540ec19c11c52efbbc
This commit is contained in:
Eric Coissac
2023-04-17 11:32:10 +02:00
parent 71023423e6
commit 9bac7f387a
3 changed files with 36 additions and 2 deletions
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2
pkg/obitools/obipcr/options.go
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@@ -33,7 +33,7 @@ func PCROptionSet(options *getoptions.GetOpt) {
options.Description("Considers that sequences are [c]ircular."))
options.BoolVar(&_Fragmented, "fragmented", false,
options.Description("Fragaments long sequences in overlaping fragments to speedup computations"))
options.Description("Fragments long sequences in overlaping fragments to speedup computations"))
options.StringVar(&_ForwardPrimer, "forward", "",
options.Required("You must provide a forward primer"),

2
pkg/obitools/obipcr/pcr.go
View File

@@ -49,7 +49,7 @@ func CLIPCR(iterator obiiter.IBioSequence) (obiiter.IBioSequence, error) {
obioptions.CLIParallelWorkers(),
)
log.Infof("Fragmenting sequence longer than %dbp into chuncks of %dbp",
CLIMaxLength()*100000000,
CLIMaxLength()*1000,
CLIMaxLength()*100,
)
iterator = iterator.Pipe(frags)