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Correct a bug in the fastq reader affecting the quality of the last record of each chunk

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Former-commit-id: b842d60af9c2f1f971946d99999d13cfc15793b3
This commit is contained in:
Eric Coissac
2024-06-04 11:57:16 +02:00
parent 411124d1b3
commit aa42df326a
6 changed files with 104 additions and 42 deletions
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5
pkg/obiformats/seqfile_chunck_read.go
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@@ -91,11 +91,6 @@ func ReadSeqFileChunk(reader io.Reader,
io := bytes.NewBuffer(slices.Clone(buff))
chunk_channel <- SeqFileChunk{io, i}
i++
// if string(buff[io.Len()-2:]) != "//" {
// log.Fatalf("File chunck ends with 3 bytes : %s", io.Bytes()[io.Len()-3:])
// }
}
if lremain > 0 {