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Reduce redundante call to bytes.ToLower and substitute the last call by an home made version doing the conversion in place

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Former-commit-id: d9ea22f649d97be352f8dbb37acc1495df830118
This commit is contained in:
Eric Coissac
2023-03-28 11:43:04 +07:00
parent e8a8f746d3
commit bc82422bc5
6 changed files with 18 additions and 10 deletions
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5
pkg/obiseq/biosequence.go
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@@ -11,10 +11,10 @@
package obiseq
import (
"bytes"
"crypto/md5"
"sync/atomic"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obiutils"
log "github.com/sirupsen/logrus"
)
@@ -210,7 +210,6 @@ func (s *BioSequence) Source() string {
return s.source
}
// Returning the MD5 hash of the sequence.
func (s *BioSequence) MD5() [16]byte {
return md5.Sum(s.sequence)
@@ -244,7 +243,7 @@ func (s *BioSequence) SetSequence(sequence []byte) {
if s.sequence != nil {
RecycleSlice(&s.sequence)
}
s.sequence = bytes.ToLower(sequence)
s.sequence = obiutils.InPlaceToLower(sequence)
}
// Setting the qualities of the BioSequence.