mirror of
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Reorganization of the documentation book directory
Former-commit-id: 095acaf9c8649b0e527c6253dc79330feedac865
This commit is contained in:
358
doc/book/TAXO/gc.prt
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358
doc/book/TAXO/gc.prt
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@@ -0,0 +1,358 @@
|
||||
--**************************************************************************
|
||||
-- This is the NCBI genetic code table
|
||||
-- Initial base data set from Andrzej Elzanowski while at PIR International
|
||||
-- Addition of Eubacterial and Alternative Yeast by J.Ostell at NCBI
|
||||
-- Base 1-3 of each codon have been added as comments to facilitate
|
||||
-- readability at the suggestion of Peter Rice, EMBL
|
||||
-- Later additions by Taxonomy Group staff at NCBI
|
||||
--
|
||||
-- Version 4.6
|
||||
-- Renamed genetic code 24 to Rhabdopleuridae Mitochondrial
|
||||
--
|
||||
-- Version 4.5
|
||||
-- Added Cephalodiscidae mitochondrial genetic code 33
|
||||
--
|
||||
-- Version 4.4
|
||||
-- Added GTG as start codon for genetic code 3
|
||||
-- Added Balanophoraceae plastid genetic code 32
|
||||
--
|
||||
-- Version 4.3
|
||||
-- Change to CTG -> Leu in genetic codes 27, 28, 29, 30
|
||||
--
|
||||
-- Version 4.2
|
||||
-- Added Karyorelict nuclear genetic code 27
|
||||
-- Added Condylostoma nuclear genetic code 28
|
||||
-- Added Mesodinium nuclear genetic code 29
|
||||
-- Added Peritrich nuclear genetic code 30
|
||||
-- Added Blastocrithidia nuclear genetic code 31
|
||||
--
|
||||
-- Version 4.1
|
||||
-- Added Pachysolen tannophilus nuclear genetic code 26
|
||||
--
|
||||
-- Version 4.0
|
||||
-- Updated version to reflect numerous undocumented changes:
|
||||
-- Corrected start codons for genetic code 25
|
||||
-- Name of new genetic code is Candidate Division SR1 and Gracilibacteria
|
||||
-- Added candidate division SR1 nuclear genetic code 25
|
||||
-- Added GTG as start codon for genetic code 24
|
||||
-- Corrected Pterobranchia Mitochondrial genetic code (24)
|
||||
-- Added genetic code 24, Pterobranchia Mitochondrial
|
||||
-- Genetic code 11 is now Bacterial, Archaeal and Plant Plastid
|
||||
-- Fixed capitalization of mitochondrial in codes 22 and 23
|
||||
-- Added GTG, ATA, and TTG as alternative start codons to code 13
|
||||
--
|
||||
-- Version 3.9
|
||||
-- Code 14 differs from code 9 only by translating UAA to Tyr rather than
|
||||
-- STOP. A recent study (Telford et al, 2000) has found no evidence that
|
||||
-- the codon UAA codes for Tyr in the flatworms, but other opinions exist.
|
||||
-- There are very few GenBank records that are translated with code 14,
|
||||
-- but a test translation shows that retranslating these records with code
|
||||
-- 9 can cause premature terminations. Therefore, GenBank will maintain
|
||||
-- code 14 until further information becomes available.
|
||||
--
|
||||
-- Version 3.8
|
||||
-- Added GTG start to Echinoderm mitochondrial code, code 9
|
||||
--
|
||||
-- Version 3.7
|
||||
-- Added code 23 Thraustochytrium mitochondrial code
|
||||
-- formerly OGMP code 93
|
||||
-- submitted by Gertraude Berger, Ph.D.
|
||||
--
|
||||
-- Version 3.6
|
||||
-- Added code 22 TAG-Leu, TCA-stop
|
||||
-- found in mitochondrial DNA of Scenedesmus obliquus
|
||||
-- submitted by Gertraude Berger, Ph.D.
|
||||
-- Organelle Genome Megasequencing Program, Univ Montreal
|
||||
--
|
||||
-- Version 3.5
|
||||
-- Added code 21, Trematode Mitochondrial
|
||||
-- (as deduced from: Garey & Wolstenholme,1989; Ohama et al, 1990)
|
||||
-- Added code 16, Chlorophycean Mitochondrial
|
||||
-- (TAG can translated to Leucine instaed to STOP in chlorophyceans
|
||||
-- and fungi)
|
||||
--
|
||||
-- Version 3.4
|
||||
-- Added CTG,TTG as allowed alternate start codons in Standard code.
|
||||
-- Prats et al. 1989, Hann et al. 1992
|
||||
--
|
||||
-- Version 3.3 - 10/13/95
|
||||
-- Added alternate intiation codon ATC to code 5
|
||||
-- based on complete mitochondrial genome of honeybee
|
||||
-- Crozier and Crozier (1993)
|
||||
--
|
||||
-- Version 3.2 - 6/24/95
|
||||
-- Code Comments
|
||||
-- 10 Alternative Ciliate Macronuclear renamed to Euplotid Macro...
|
||||
-- 15 Blepharisma Macro.. code added
|
||||
-- 5 Invertebrate Mito.. GTG allowed as alternate initiator
|
||||
-- 11 Eubacterial renamed to Bacterial as most alternate starts
|
||||
-- have been found in Archea
|
||||
--
|
||||
--
|
||||
-- Version 3.1 - 1995
|
||||
-- Updated as per Andrzej Elzanowski at NCBI
|
||||
-- Complete documentation in NCBI toolkit documentation
|
||||
-- Note: 2 genetic codes have been deleted
|
||||
--
|
||||
-- Old id Use id - Notes
|
||||
--
|
||||
-- id 7 id 4 - Kinetoplast code now merged in code id 4
|
||||
-- id 8 id 1 - all plant chloroplast differences due to RNA edit
|
||||
--
|
||||
--
|
||||
--*************************************************************************
|
||||
|
||||
Genetic-code-table ::= {
|
||||
{
|
||||
name "Standard" ,
|
||||
name "SGC0" ,
|
||||
id 1 ,
|
||||
ncbieaa "FFLLSSSSYY**CC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "---M------**--*----M---------------M----------------------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
},
|
||||
{
|
||||
name "Vertebrate Mitochondrial" ,
|
||||
name "SGC1" ,
|
||||
id 2 ,
|
||||
ncbieaa "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIMMTTTTNNKKSS**VVVVAAAADDEEGGGG",
|
||||
sncbieaa "----------**--------------------MMMM----------**---M------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
},
|
||||
{
|
||||
name "Yeast Mitochondrial" ,
|
||||
name "SGC2" ,
|
||||
id 3 ,
|
||||
ncbieaa "FFLLSSSSYY**CCWWTTTTPPPPHHQQRRRRIIMMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "----------**----------------------MM---------------M------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
},
|
||||
{
|
||||
name "Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate
|
||||
Mitochondrial; Mycoplasma; Spiroplasma" ,
|
||||
name "SGC3" ,
|
||||
id 4 ,
|
||||
ncbieaa "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "--MM------**-------M------------MMMM---------------M------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
},
|
||||
{
|
||||
name "Invertebrate Mitochondrial" ,
|
||||
name "SGC4" ,
|
||||
id 5 ,
|
||||
ncbieaa "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIMMTTTTNNKKSSSSVVVVAAAADDEEGGGG",
|
||||
sncbieaa "---M------**--------------------MMMM---------------M------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
},
|
||||
{
|
||||
name "Ciliate Nuclear; Dasycladacean Nuclear; Hexamita Nuclear" ,
|
||||
name "SGC5" ,
|
||||
id 6 ,
|
||||
ncbieaa "FFLLSSSSYYQQCC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "--------------*--------------------M----------------------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
},
|
||||
{
|
||||
name "Echinoderm Mitochondrial; Flatworm Mitochondrial" ,
|
||||
name "SGC8" ,
|
||||
id 9 ,
|
||||
ncbieaa "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIIMTTTTNNNKSSSSVVVVAAAADDEEGGGG",
|
||||
sncbieaa "----------**-----------------------M---------------M------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
},
|
||||
{
|
||||
name "Euplotid Nuclear" ,
|
||||
name "SGC9" ,
|
||||
id 10 ,
|
||||
ncbieaa "FFLLSSSSYY**CCCWLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "----------**-----------------------M----------------------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
},
|
||||
{
|
||||
name "Bacterial, Archaeal and Plant Plastid" ,
|
||||
id 11 ,
|
||||
ncbieaa "FFLLSSSSYY**CC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "---M------**--*----M------------MMMM---------------M------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
},
|
||||
{
|
||||
name "Alternative Yeast Nuclear" ,
|
||||
id 12 ,
|
||||
ncbieaa "FFLLSSSSYY**CC*WLLLSPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "----------**--*----M---------------M----------------------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
},
|
||||
{
|
||||
name "Ascidian Mitochondrial" ,
|
||||
id 13 ,
|
||||
ncbieaa "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIMMTTTTNNKKSSGGVVVVAAAADDEEGGGG",
|
||||
sncbieaa "---M------**----------------------MM---------------M------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
},
|
||||
{
|
||||
name "Alternative Flatworm Mitochondrial" ,
|
||||
id 14 ,
|
||||
ncbieaa "FFLLSSSSYYY*CCWWLLLLPPPPHHQQRRRRIIIMTTTTNNNKSSSSVVVVAAAADDEEGGGG",
|
||||
sncbieaa "-----------*-----------------------M----------------------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
} ,
|
||||
{
|
||||
name "Blepharisma Macronuclear" ,
|
||||
id 15 ,
|
||||
ncbieaa "FFLLSSSSYY*QCC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "----------*---*--------------------M----------------------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
} ,
|
||||
{
|
||||
name "Chlorophycean Mitochondrial" ,
|
||||
id 16 ,
|
||||
ncbieaa "FFLLSSSSYY*LCC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "----------*---*--------------------M----------------------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
} ,
|
||||
{
|
||||
name "Trematode Mitochondrial" ,
|
||||
id 21 ,
|
||||
ncbieaa "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIMMTTTTNNNKSSSSVVVVAAAADDEEGGGG",
|
||||
sncbieaa "----------**-----------------------M---------------M------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
} ,
|
||||
{
|
||||
name "Scenedesmus obliquus Mitochondrial" ,
|
||||
id 22 ,
|
||||
ncbieaa "FFLLSS*SYY*LCC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "------*---*---*--------------------M----------------------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
} ,
|
||||
{
|
||||
name "Thraustochytrium Mitochondrial" ,
|
||||
id 23 ,
|
||||
ncbieaa "FF*LSSSSYY**CC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "--*-------**--*-----------------M--M---------------M------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
} ,
|
||||
{
|
||||
name "Rhabdopleuridae Mitochondrial" ,
|
||||
id 24 ,
|
||||
ncbieaa "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSSKVVVVAAAADDEEGGGG",
|
||||
sncbieaa "---M------**-------M---------------M---------------M------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
} ,
|
||||
{
|
||||
name "Candidate Division SR1 and Gracilibacteria" ,
|
||||
id 25 ,
|
||||
ncbieaa "FFLLSSSSYY**CCGWLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "---M------**-----------------------M---------------M------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
} ,
|
||||
{
|
||||
name "Pachysolen tannophilus Nuclear" ,
|
||||
id 26 ,
|
||||
ncbieaa "FFLLSSSSYY**CC*WLLLAPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "----------**--*----M---------------M----------------------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
} ,
|
||||
{
|
||||
name "Karyorelict Nuclear" ,
|
||||
id 27 ,
|
||||
ncbieaa "FFLLSSSSYYQQCCWWLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "--------------*--------------------M----------------------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
} ,
|
||||
{
|
||||
name "Condylostoma Nuclear" ,
|
||||
id 28 ,
|
||||
ncbieaa "FFLLSSSSYYQQCCWWLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "----------**--*--------------------M----------------------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
} ,
|
||||
{
|
||||
name "Mesodinium Nuclear" ,
|
||||
id 29 ,
|
||||
ncbieaa "FFLLSSSSYYYYCC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "--------------*--------------------M----------------------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
} ,
|
||||
{
|
||||
name "Peritrich Nuclear" ,
|
||||
id 30 ,
|
||||
ncbieaa "FFLLSSSSYYEECC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "--------------*--------------------M----------------------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
} ,
|
||||
{
|
||||
name "Blastocrithidia Nuclear" ,
|
||||
id 31 ,
|
||||
ncbieaa "FFLLSSSSYYEECCWWLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "----------**-----------------------M----------------------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
} ,
|
||||
{
|
||||
name "Balanophoraceae Plastid" ,
|
||||
id 32 ,
|
||||
ncbieaa "FFLLSSSSYY*WCC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
|
||||
sncbieaa "---M------*---*----M------------MMMM---------------M------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
} ,
|
||||
{
|
||||
name "Cephalodiscidae Mitochondrial" ,
|
||||
id 33 ,
|
||||
ncbieaa "FFLLSSSSYYY*CCWWLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSSKVVVVAAAADDEEGGGG",
|
||||
sncbieaa "---M-------*-------M---------------M---------------M------------"
|
||||
-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
|
||||
-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
|
||||
-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
|
||||
}
|
||||
}
|
||||
Reference in New Issue
Block a user