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code refactoring. Prefix function name having behaviour depending on command line option by the prefix CLI

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This commit is contained in:
Eric Coissac
2023-02-23 23:32:59 +01:00
parent a0ab14c205
commit ebb05fcdf7
15 changed files with 39 additions and 21 deletions
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2
cmd/obitools/obiannotate/main.go
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@@ -34,7 +34,7 @@ func main() {
_, args, _ := optionParser(os.Args)
sequences, _ := obiconvert.ReadBioSequences(args...)
sequences, _ := obiconvert.CLIReadBioSequences(args...)
annotator := obiannotate.CLIAnnotationPipeline()
obiconvert.CLIWriteBioSequences(sequences.Pipe(annotator), true)