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Code refactoring

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This commit is contained in:
Eric Coissac
2022-01-14 17:32:12 +01:00
parent 5753723618
commit ef66ca4972
16 changed files with 260 additions and 260 deletions
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46
pkg/obiseq/workers.go
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@@ -25,25 +25,25 @@ func (iterator IBioSequence) MakeIWorker(worker SeqWorker, sizes ...int) IBioSeq
buffsize = sizes[0]
}
new_iter := MakeIBioSequence(buffsize)
newIter := MakeIBioSequence(buffsize)
new_iter.Add(1)
newIter.Add(1)
go func() {
new_iter.Wait()
close(new_iter.pointer.channel)
newIter.Wait()
close(newIter.pointer.channel)
}()
go func() {
for iterator.Next() {
seq := iterator.Get()
seq = worker(seq)
new_iter.pointer.channel <- seq
newIter.pointer.channel <- seq
}
new_iter.Done()
newIter.Done()
}()
return new_iter
return newIter
}
func (iterator IBioSequenceBatch) MakeIWorker(worker SeqWorker, sizes ...int) IBioSequenceBatch {
@@ -58,16 +58,16 @@ func (iterator IBioSequenceBatch) MakeIWorker(worker SeqWorker, sizes ...int) IB
buffsize = sizes[1]
}
new_iter := MakeIBioSequenceBatch(buffsize)
newIter := MakeIBioSequenceBatch(buffsize)
new_iter.Add(nworkers)
newIter.Add(nworkers)
go func() {
new_iter.Wait()
for len(new_iter.Channel()) > 0 {
newIter.Wait()
for len(newIter.Channel()) > 0 {
time.Sleep(time.Millisecond)
}
close(new_iter.pointer.channel)
close(newIter.pointer.channel)
log.Println("End of the batch workers")
}()
@@ -78,9 +78,9 @@ func (iterator IBioSequenceBatch) MakeIWorker(worker SeqWorker, sizes ...int) IB
for i, seq := range batch.slice {
batch.slice[i] = worker(seq)
}
new_iter.pointer.channel <- batch
newIter.pointer.channel <- batch
}
new_iter.Done()
newIter.Done()
}
log.Println("Start of the batch workers")
@@ -88,7 +88,7 @@ func (iterator IBioSequenceBatch) MakeIWorker(worker SeqWorker, sizes ...int) IB
go f(iterator.Split())
}
return new_iter
return newIter
}
func (iterator IBioSequenceBatch) MakeISliceWorker(worker SeqSliceWorker, sizes ...int) IBioSequenceBatch {
@@ -103,16 +103,16 @@ func (iterator IBioSequenceBatch) MakeISliceWorker(worker SeqSliceWorker, sizes
buffsize = sizes[1]
}
new_iter := MakeIBioSequenceBatch(buffsize)
newIter := MakeIBioSequenceBatch(buffsize)
new_iter.Add(nworkers)
newIter.Add(nworkers)
go func() {
new_iter.Wait()
for len(new_iter.Channel()) > 0 {
newIter.Wait()
for len(newIter.Channel()) > 0 {
time.Sleep(time.Millisecond)
}
close(new_iter.pointer.channel)
close(newIter.pointer.channel)
log.Println("End of the batch slice workers")
}()
@@ -120,9 +120,9 @@ func (iterator IBioSequenceBatch) MakeISliceWorker(worker SeqSliceWorker, sizes
for iterator.Next() {
batch := iterator.Get()
batch.slice = worker(batch.slice)
new_iter.pointer.channel <- batch
newIter.pointer.channel <- batch
}
new_iter.Done()
newIter.Done()
}
log.Println("Start of the batch slice workers")
@@ -130,5 +130,5 @@ func (iterator IBioSequenceBatch) MakeISliceWorker(worker SeqSliceWorker, sizes
go f(iterator.Split())
}
return new_iter
return newIter
}