Commit Graph

15 Commits

Author SHA1 Message Date
Eric Coissac
7c4042df6b introduce obidefault 2025-01-27 17:12:45 +01:00
Eric Coissac
7884a74f9c Patch a bug in obitagpcr 2024-11-18 21:10:47 +01:00
Eric Coissac
4b65bfce84 Changes to be committed:
modified:   pkg/obioptions/version.go
	modified:   pkg/obitools/obitagpcr/pcrtag.go
2024-11-04 14:30:17 +01:00
Eric Coissac
fc75974c68 Changes to be committed:
modified:   pkg/obioptions/version.go
	modified:   pkg/obitools/obitagpcr/options.go
2024-11-04 13:25:52 +01:00
Eric Coissac
422f11cceb Changes to be committed:
modified:   pkg/obitools/obitagpcr/pcrtag.go
2024-10-29 16:53:10 +01:00
Eric Coissac
fefc360f80 Changes to be committed:
modified:   pkg/obioptions/version.go
	modified:   pkg/obitools/obitagpcr/pcrtag.go
	modified:   pkg/obiutils/abs.go
	new file:   pkg/obiutils/abs_test.go
2024-10-28 21:51:21 +01:00
Eric Coissac
e6b87ecd02 Reduce memory allocation events
Former-commit-id: fbdb2afc857b02adc2593e2278d3bd838e99b0b2
2024-06-22 21:01:53 +02:00
Eric Coissac
65f5109957 Plenty of small bugs
Former-commit-id: 42c7fab7d65906c80ab4cd32da6867ff21842ea8
2024-06-04 16:49:12 +02:00
37c3e16d5d Adds the option --pairing-scale to obipairing
Former-commit-id: c60416708467f5e818e70e08b3c512014b6212f0
2023-12-07 12:28:16 +01:00
8d77cc4133 Change path of the obitools pkg
Former-commit-id: 311cbf8df3b990b393c6f4885d62e74564423b65
2023-11-29 12:14:37 +01:00
b556e045e5 Adds option to tune the pairing of the sequences in obipairing and some stats to the results
Former-commit-id: a6cf9cb4d4ab20a433a2534fd7d11cd3ca8ebbaa
2023-11-24 12:29:37 +01:00
9ee45701b7 correction of two warnings
Former-commit-id: d2d08b5d6f7511598625536f5a708db347742c20
2023-11-09 22:37:55 +02:00
5ea2b8afcf a first version of obisummary
Former-commit-id: cca1019d82a14a322f46a20890b996b5c7491d41
2023-11-09 22:33:06 +02:00
b44fcfb2a0 Correct a bug related to the renaming of the forward_mismatch and reverse_mismatch to forward_error and reverse_error
Former-commit-id: c0d6cfda0d8e50364616fd79313c5711ed7bb43e
2023-06-08 16:40:03 +02:00
71023423e6 Add a new command obitagpcr able to tag reads according to their corresponding pcr samples
Former-commit-id: 1f34bf0a27d55afc3556efd64f6ccee6d2329aff
2023-04-07 17:45:22 +02:00