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https://github.com/metabarcoding/obitools4.git
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30 lines
715 B
Go
30 lines
715 B
Go
package main
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import (
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"os"
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"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obitools/obiconvert"
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"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obitools/obilandmark"
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"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obiutils"
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"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obioptions"
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)
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func main() {
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optionParser := obioptions.GenerateOptionParser(
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"obilandmark",
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"",
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obilandmark.OptionSet)
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_, args := optionParser(os.Args)
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fs, err := obiconvert.CLIReadBioSequences(args...)
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obiconvert.OpenSequenceDataErrorMessage(args, err)
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indexed := obilandmark.CLISelectLandmarkSequences(fs)
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obiconvert.CLIWriteBioSequences(indexed, true)
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obiutils.WaitForLastPipe()
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}
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