Files
obitools4/cmd/obitools/obiconvert/main.go

32 lines
768 B
Go

package main
import (
"os"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obidefault"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obitools/obiconvert"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obiutils"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obioptions"
)
func main() {
obidefault.SetStrictReadWorker(2)
obidefault.SetStrictWriteWorker(2)
optionParser := obioptions.GenerateOptionParser(
"obiconvert",
"convertion of sequence files to various formats",
obiconvert.OptionSet(true))
_, args := optionParser(os.Args)
fs, err := obiconvert.CLIReadBioSequences(args...)
obiconvert.OpenSequenceDataErrorMessage(args, err)
obiconvert.CLIWriteBioSequences(fs, true)
obiutils.WaitForLastPipe()
}