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Release_4.4.15
obitools4/pkg
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Eric Coissac 1ce5da9bee Support new sequence file formats and improve error handling 
Add support for .gbff and .gbff.gz file extensions in sequence reader.

Update the logic to return an error instead of using NilIBioSequence when no sequence files are found, improving the error handling and user feedback.
2026-02-11 06:31:10 +01:00
..
obialign
work on obiclean chimera detection
2025-10-20 17:29:47 +02:00
obiapat
debug obimultiplex
2025-11-06 15:43:13 +01:00
obichunk
Fix classifier cloning and reset in chunk processing
2026-02-08 15:52:25 +01:00
obicorazick
Add progress bar configuration and conditional display
2026-02-08 16:14:02 +01:00
obidefault
Add progress bar configuration and conditional display
2026-02-08 16:14:02 +01:00
obidist
Add Jaccard distance and similarity computations for KmerSet and KmerSetGroup
2026-02-05 17:39:23 +01:00
obiformats
debug url reading
2025-11-18 15:30:20 +01:00
obifp
Adds the --silent-warning options to the obitools commands and removes the --pared-with option from some of the obitols commands.
2025-03-25 16:44:46 +01:00
obigraph
Add obiminion first version
2024-05-14 08:16:12 +02:00
obiiter
Add progress bar configuration and conditional display
2026-02-08 16:14:02 +01:00
obiitercsv
break the import cyccle
2025-01-27 17:23:07 +01:00
obikmer
Refactor k-mer matching pipeline with improved concurrency and memory management
2026-02-10 22:10:36 +01:00
obilog
Adds the --silent-warning options to the obitools commands and removes the --pared-with option from some of the obitols commands.
2025-03-25 16:44:46 +01:00
obilua
Adds the --silent-warning options to the obitools commands and removes the --pared-with option from some of the obitols commands.
2025-03-25 16:44:46 +01:00
obingslibrary
Changes to be committed:
2025-06-17 09:06:42 +02:00
obioptions
Bump version to 4.4.14
2026-02-10 22:17:23 +01:00
obiphylo
Changes to be committed:
2025-06-04 09:48:10 +02:00
obiseq
Update obiuniq for very large dataset
2025-12-18 14:11:11 +01:00
obistats
Adds the --silent-warning options to the obitools commands and removes the --pared-with option from some of the obitols commands.
2025-03-25 16:44:46 +01:00
obisuffix
Swich to the system min and max functions and remove the version from obiutils
2024-05-30 08:27:24 +02:00
obitable
many changes ;-)
2023-12-05 15:28:29 +01:00
obitax
debug url reading
2025-11-18 15:30:20 +01:00
obitools
Support new sequence file formats and improve error handling
2026-02-11 06:31:10 +01:00
obiutils
implementation de obilowmask
2025-11-18 15:30:20 +01:00