First version including the rRNA detector
Former-commit-id: 865e2626c7cd92ea596aedefe2b760b3eaaa9c77 Former-commit-id: 94a2e642328eb679660c6ac5a6cb6803c2083632
This commit is contained in:
File diff suppressed because it is too large
Load Diff
File diff suppressed because it is too large
Load Diff
25350
data/rrna/23S.goodali.fst
Normal file
25350
data/rrna/23S.goodali.fst
Normal file
File diff suppressed because it is too large
Load Diff
@ -1,381 +0,0 @@
|
||||
CLUSTAL W (1.7) multiple sequence alignment
|
||||
|
||||
|
||||
NC_000932_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_001320_LCS taaggtagcggcgagacgagccg-------------------------------------
|
||||
NC_004677_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_008115_LCS gaaggtcacggcgagacgagctg-------------------------------------
|
||||
NC_006290_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_007942_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_026134_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_011828_LCS gaaggtcacggcgagactagccg-------------------------------------
|
||||
NC_009618_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_002693_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_005086_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_009259_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_024021_LCS --aggtcatggcgagacgagccg-------------------------------------
|
||||
NC_008335_LCS -aaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_026295_LCS --aggtcacggcgagacgagccg-------------------------------------
|
||||
NC_016708_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_008796_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_010442_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_021425_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_007407_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_015891_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_016064_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_001631_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_005087_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_021449_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_023119_LCS -aaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_023090_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_015621_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_009271_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_003119_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_007144_LCS gaaggtcacggcgagatgagccg-------------------------------------
|
||||
NC_009766_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_025744_LCS -aaggtcacggcgagactagccg-------------------------------------
|
||||
NC_001568_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_009765_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_017006_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_008829_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_014676_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_025236_LCS taaggtagcggcgagacgagccg-------------------------------------
|
||||
NC_023533_LCS taaggtagcggcgagacgagccg-------------------------------------
|
||||
NC_014062_LCS taaggtagcggcgagacgagccg-------------------------------------
|
||||
NC_020321_LCS taaggtcaaggcgagacgagcct-------------------------------------
|
||||
NC_012818_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_022137_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_014348_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_024158_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_014699_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_010109_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_014592_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_014675_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_024291_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_019628_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_020146_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_015402_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_004766_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_012052_LCS taaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_001319_LCS taaggtcacggcaagactagccg-------------------------------------
|
||||
NC_004543_LCS taaggtcacggcaagatgagccg-------------------------------------
|
||||
NC_020259_LCS taaggtcacggcaagatgagccg-------------------------------------
|
||||
NC_025659_LCS taaggtcacggcgagacgagcca-------------------------------------
|
||||
NC_026775_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_026773_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_025305_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_011954_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_026301_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_010654_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_026778_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_021936_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_026776_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_014056_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_026449_LCS taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_024945_LCS taaggtcacggcgagatgagccg-------------------------------------
|
||||
NC_026785_LCS taaggtcacggctagacgagccg-------------------------------------
|
||||
NC_023805_LCS taaggtcacggtgagactagccg-------------------------------------
|
||||
NC_024827_LCS taaggtcacggtgagactagccg-------------------------------------
|
||||
NC_020365_LCS taaggtcacgtcgagacgagccg-------------------------------------
|
||||
NC_010548_LCS taaggtcatggcgagacgagccg-------------------------------------
|
||||
NC_013086_LCS tgaggtcacggcaagatgagccg-------------------------------------
|
||||
NC_006861_LCS -aaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_003386_LCS -aaggtcacggcaagacgagccg-------------------------------------
|
||||
NC_016471_LCS -aaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_010359_LCS -aaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_020372_LCS -aaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_014582_LCS -aaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_024421_LCS -aaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_018114_LCS -aaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_026847_LCS -aaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_023120_LCS -aaggtcacggtgagactagccg-------------------------------------
|
||||
NC_014874_LCS -aaggtcacggttagacgagccg-------------------------------------
|
||||
NC_011942_LCS -------------agacgagccg-------------------------------------
|
||||
NC_016065_LCS agaggtcttggcgagactagcca-------------------------------------
|
||||
NC_022136_LCS caaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_014063_LCS caaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_023121_LCS -caggtcacggcgagacgagccg-------------------------------------
|
||||
NC_021110_LCS cgaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_016063_LCS cgaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_025642_LCS gaaggtcacggcgagacgagcca-------------------------------------
|
||||
NC_026202_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_009266_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_002202_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_025554_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_021111_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_023359_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_010776_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_024635_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_025907_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_008336_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_022457_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_023259_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_025909_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_024038_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_014057_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_002694_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_010433_LCS_CMP gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_001666_LCS_CMP taaggtagcggcgagacgagccg-------------------------------------
|
||||
NC_013991_LCS_CMP taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_024168_LCS_CMP --aggtcacggcaagacgagccg-------------------------------------
|
||||
NC_023356_LCS_CMP taaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_013707_LCS_CMP gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_021372_LCS taaggtagcggcgagacgagccg-------------------------------------
|
||||
NC_007578_LCS gaaggtcacggcgagacgagccg-------------------------------------
|
||||
NC_008454_LCS gaaggtcacggcgagacgagccg------------------tttatcatattactcaatt
|
||||
NC_014569_LCS gaaggtcacggcgagacgagccgtttgttttagagtgtcaaagtcttgagaattcaggcg
|
||||
NC_026448_LCS taaggtcgcggcgagatgatccg-------------------------------------
|
||||
|
||||
|
||||
NC_000932_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_001320_LCS ----------ttta----------aataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_004677_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_008115_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_006290_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_007942_LCS ----------tttctaatt--aatgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_026134_LCS ----------tttatcatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_011828_LCS ----------tttttcatt--aacgataggtgtcaagtggaagtgcagtaatgtatg-ca
|
||||
NC_009618_LCS ----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
NC_002693_LCS ----------tttatcatt---atgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_005086_LCS ----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_009259_LCS ----------tttctaatt--aatgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_024021_LCS ----------ttag--------gtgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
NC_008335_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_026295_LCS ----------ttag--------gtgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
NC_016708_LCS ----------tttctcatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_008796_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_010442_LCS ----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_021425_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_007407_LCS ----------tttatcatt---acgataggtgccaagtggaagtgcagtgatgtatg-ca
|
||||
NC_015891_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_016064_LCS ----------tttatcatt---acgataggtgtcaagtggaagtacagtgatgtatg-ca
|
||||
NC_001631_LCS ----------tttataatt---atgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_005087_LCS ----------tttatcatc---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
||||
NC_021449_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_023119_LCS ----------tttttcatt---ccgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_023090_LCS ----------tttctcatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_015621_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_009271_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_003119_LCS ----------tttttcatt--aacgataggtgtcaagtggaagtgcagtaatgtatg-ca
|
||||
NC_007144_LCS ----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_009766_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_025744_LCS -----------ttttcatt--aacgataggtgtcaagtggaagtgcagtaatgtatg-ca
|
||||
NC_001568_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_009765_LCS ----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_017006_LCS ----------tttatcacc---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
||||
NC_008829_LCS ----------tttatcact---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
||||
NC_014676_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_025236_LCS ----------ttta----------aataggtgtcaagtggaagtacagtgatgtatg-ca
|
||||
NC_023533_LCS ----------ttta----------aataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_014062_LCS ----------ttta----------aataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_020321_LCS ----------tttatcaa----acgataggtatcaagtggaagtgcagtgatgtacg-ca
|
||||
NC_012818_LCS ----------tttatcacc---acgataggtgccaagtggaggtgcagtaatgtatg-ca
|
||||
NC_022137_LCS ----------tttatcacc---acgataggtgccaagtggaggtgcagtgatgcatg-ca
|
||||
NC_014348_LCS ----------tttatcact---acgataggtgctaagtggaggtgcagtaatgtatg-ca
|
||||
NC_024158_LCS ----------tttatcatc---acgataggtgccaggtggaagtgcagtaatgtatg-ca
|
||||
NC_014699_LCS ----------tttatcatt---acgataggtgccaggtggaagtgcagtaatgtatg-ca
|
||||
NC_010109_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_014592_LCS ----------tttatcgcc---acaataggtgctaagtggaggtgcagtaatgtatg-ca
|
||||
NC_014675_LCS ----------tttatcgtc---acgataggtgccaagtggaagtgcagtaatgcatg-ca
|
||||
NC_024291_LCS ----------tttatgatc---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
||||
NC_019628_LCS ----------tttatgatc---acgataggtgccaagtggaagtgcagtaatgtatg-ta
|
||||
NC_020146_LCS ----------tttatgatt---acgataggtgccaggtggaagtgcagtaatgtatg-ca
|
||||
NC_015402_LCS ----------tttattata---acgataggtgccaagtggaagtgcagtaatgtatg-ta
|
||||
NC_004766_LCS ----------tttctcact---acgataggtgctaagtggaagtgcagtaatgtatg-ca
|
||||
NC_012052_LCS ----------tttgttatt---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
||||
NC_001319_LCS ----------tttattttt---acgataggtgccaagtggaagtgcagtaatgtatg-ta
|
||||
NC_004543_LCS ----------tttatcata---acaataggtgccaagtagaagtgcagtaatgtatg-ca
|
||||
NC_020259_LCS ----------tttatcata---acaataggtgccaagtggaagtgcagtaatgtatg-ca
|
||||
NC_025659_LCS ----------tttctcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_026775_LCS ----------cttatcatt---acgataggtgccaagtggaagtgcagtgatgtatg-ca
|
||||
NC_026773_LCS ----------cttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_025305_LCS --------------ttatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_011954_LCS ----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
NC_026301_LCS ----------tttatcatc---acgataggtgtcaagtggagatgcagtaatgtatg-ca
|
||||
NC_010654_LCS ----------tttatcatc---acgataggtgtcaagtggagatgcagtgatgtatg-ca
|
||||
NC_026778_LCS ----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_021936_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_026776_LCS ----------tttatcatt---atgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_014056_LCS ----------tttctcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_026449_LCS ----------tgtatcaac---attataggtgccgagtgtaagtgcggcgatgcatg-ca
|
||||
NC_024945_LCS ----------tttatcag----acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_026785_LCS ----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_023805_LCS ----------tttacgact---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_024827_LCS ----------tttacgact---acgataggtgtcaagtggaagtgcagtgatgtatg-ta
|
||||
NC_020365_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagcgatgtatg-ca
|
||||
NC_010548_LCS ----------tttattag----acgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
NC_013086_LCS ----------tttatcata---acgataggtgccaggtggaagtgcagtcatgtacg-ca
|
||||
NC_006861_LCS ----------tttatcatc---acgataggtgccaagtggaaatacagtaatgtatg-ca
|
||||
NC_003386_LCS ----------tttattatc---acgataggtgccaagtggaagtgcagtaatgtacg-ca
|
||||
NC_016471_LCS ----------tttataatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_010359_LCS ----------tttatcatc---acgataggtgccaggtggaagtgcagtgatgtatg-ta
|
||||
NC_020372_LCS ----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_014582_LCS ----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_024421_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagcgatgtatg-ca
|
||||
NC_018114_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_026847_LCS ----------tttatcatt---ccaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_023120_LCS ----------tttacgact---acgataggtgtcaagtggaagtgcagtgatgtatg-ta
|
||||
NC_014874_LCS ----------tttattatt---atgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
NC_011942_LCS ----------tttatcatc---acgataggtgtcaagtggagatgcagtaatgtatg-ca
|
||||
NC_016065_LCS ----------gcgattag----acgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
NC_022136_LCS ----------tttctcatc---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
||||
NC_014063_LCS ----------tttttcatt--aacgataggtgtcaagtggaagtgcagtaatgtatg-ca
|
||||
NC_023121_LCS ----------ttag--------gtgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
NC_021110_LCS ----------tttatcag----acgataggtgttaagtgaaagtacagtgatgtatg-ca
|
||||
NC_016063_LCS ----------tttatcag----acgataggtgttaagtgaaagtgcagtgatgtatg-ca
|
||||
NC_025642_LCS ----------tttatcatt---acgataggtgtcaagtgtaagtgcagtgatgtatg-ca
|
||||
NC_026202_LCS ----------tttataatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_009266_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
NC_002202_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_025554_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgtagtgatgtatg-ca
|
||||
NC_021111_LCS ----------tttatcatt---acgataggtgtcaagtgtaagtgcagtgatgtatg-ca
|
||||
NC_023359_LCS ----------tttatcatt---acgataggtgtcaagtgtaagtgcagtgatgtatg-ca
|
||||
NC_010776_LCS ----------tttatcatt---acgataggtgtcaggtggaagtgcagtgatgtatg-ca
|
||||
NC_024635_LCS ----------tttatcatt---ataataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_025907_LCS ----------tttatcatt---ccaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_008336_LCS ----------tttattatt---acgataggtgtcaagtggaagtgcagcgatgtatg-ca
|
||||
NC_022457_LCS ----------tttattatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_023259_LCS ----------tttattatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_025909_LCS ----------tttctaatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_024038_LCS ----------tttctaatt--aacgataggtgtcaggtggaagtgcagtaatgtacg-ca
|
||||
NC_014057_LCS ----------tttttcatt--aacgataggtgtcaagtggaagtacagtaatgtatg-ca
|
||||
NC_002694_LCS ----------tttttcatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_010433_LCS_CMP ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_001666_LCS_CMP ----------ttta----------aataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_013991_LCS_CMP ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_024168_LCS_CMP ----------tttt---ag---acaataggtgccaggtggaagcgcagtaatgtgtg-ca
|
||||
NC_023356_LCS_CMP ----------tttatcatt---atgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_013707_LCS_CMP ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_021372_LCS ----------ttt----------aaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_007578_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_008454_LCS gatcattacgtttatcatt---acgataggtgttaagtggaagtgcagtgatgtatg-ca
|
||||
NC_014569_LCS cggcccgtcctttagagcaaaacaaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
NC_026448_LCS ----------ttgatagtgactatgataggtactaagtgtaaatgcagcgatgtatgtta
|
||||
|
||||
|
||||
NC_000932_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_001320_LCS gctgaggcatcctaac-gaacgaacgatttgaac-
|
||||
NC_004677_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_008115_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_006290_LCS gctgaggcatcctaacagaccgatagacttgaac-
|
||||
NC_007942_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_026134_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_011828_LCS gctgaggcatcctaacagaccgatagacttgaac-
|
||||
NC_009618_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_002693_LCS gctgagacatcctaacagaccgctagacttgaac-
|
||||
NC_005086_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_009259_LCS gctgaggcatcctaacagaccgttagacttgaac-
|
||||
NC_024021_LCS gccgaggcatactaaaagaccgaaagatttgaac-
|
||||
NC_008335_LCS gctgaggcatcctaacagaccga------------
|
||||
NC_026295_LCS gccgaggcatactaaaagaccgaaagatttgaac-
|
||||
NC_016708_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_008796_LCS gctgaggcatcctaacagaccaatagacttgaac-
|
||||
NC_010442_LCS gctgaggcatcctaacagaccgatagacttgaac-
|
||||
NC_021425_LCS gctgaggcatcctaacagaccgttagacttgaac-
|
||||
NC_007407_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_015891_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_016064_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_001631_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_005087_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_021449_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_023119_LCS gctgaggcatcctaacagaccgaaagatttgaac-
|
||||
NC_023090_LCS gcggaggcatcctaacagaccggtagacttgaac-
|
||||
NC_015621_LCS gctgaggcatcctaacagaccggtagact------
|
||||
NC_009271_LCS gctgaggcatcctaacagaccggtagacttgaa--
|
||||
NC_003119_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_007144_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_009766_LCS gctgaggcatcctaatagaccggtagacttgaac-
|
||||
NC_025744_LCS gctgaggcatcctaacagaccgatagacttgaac-
|
||||
NC_001568_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_009765_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_017006_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_008829_LCS gctgaggcatcctaacagaccgagaggtttgaac-
|
||||
NC_014676_LCS gctgaggcatcctaacagaccggcagacttgaac-
|
||||
NC_025236_LCS gctgaggcatcctaac-gaacgaacgatttgaac-
|
||||
NC_023533_LCS gctgaggcatcctaaccaa-cgaacgatttgaac-
|
||||
NC_014062_LCS gctgaggcatcctaat-gaacgaacgatttgaac-
|
||||
NC_020321_LCS gctgaggcatcctaacagaccgaaagattttaac-
|
||||
NC_012818_LCS gctgaggcatcctaacagaccgagaggtttgaac-
|
||||
NC_022137_LCS gctgaggcatcctaacagaccgagaggtttgaac-
|
||||
NC_014348_LCS gctgaggcatcctaacagaccgagaggtttgaac-
|
||||
NC_024158_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_014699_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_010109_LCS gctgagacatcctaacagaccgagagatttgaac-
|
||||
NC_014592_LCS gctgaggcatcctaacagaccgagaggtttgaac-
|
||||
NC_014675_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_024291_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_019628_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_020146_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_015402_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_004766_LCS gctgaggcatcctaacagaccgagaggtttgaac-
|
||||
NC_012052_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_001319_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_004543_LCS gctgaggcattctaacagaccgagagatttgaac-
|
||||
NC_020259_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_025659_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_026775_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_026773_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_025305_LCS gctgaggcatcctaacagaccgaaagatttgaac-
|
||||
NC_011954_LCS gctgagacatcctaacagaccgagagatttgaac-
|
||||
NC_026301_LCS gctgaggcatcctaaaagaccgagagatttgaac-
|
||||
NC_010654_LCS gctgaggcatcctaaaagaccgagagatttgaac-
|
||||
NC_026778_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_021936_LCS gctgaggcattctaacagaccgagagatttgaac-
|
||||
NC_026776_LCS gctgaggcatcctaatagaccgagagatttgaac-
|
||||
NC_014056_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_026449_LCS gctgaggcatactaaaagaccgatatattttaac-
|
||||
NC_024945_LCS gctgaggcatcctaacagactaaaagatttgaac-
|
||||
NC_026785_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_023805_LCS gctaaggcatcctaatagaccgaaagatttgaac-
|
||||
NC_024827_LCS gctaaggcatcctaacagaccgaaagatttgaac-
|
||||
NC_020365_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_010548_LCS gccgaggcatcctaagagaccggaagatttgaac-
|
||||
NC_013086_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_006861_LCS gctgaggcatcctaacagaccaagagatttgaacc
|
||||
NC_003386_LCS gctgaggcatcctaacagaccgatggctttgaacc
|
||||
NC_016471_LCS gctgaggcatcctaacagaccaagagatttgaac-
|
||||
NC_010359_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_020372_LCS gctgaggcatcctaacagaccgatagatttgaac-
|
||||
NC_014582_LCS gctgaggcatcctaacagaccagtagacttgaac-
|
||||
NC_024421_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_018114_LCS gctgaggcatcctaacagaccgagagatttgaacc
|
||||
NC_026847_LCS gctgaggcatcctaacagaccgcaagacttga---
|
||||
NC_023120_LCS gctaaggcatcctaacagaccgaaagatttgaac-
|
||||
NC_014874_LCS gctgaggcatactaacagaccgagagattttaacc
|
||||
NC_011942_LCS gctgaggcatcctaaaagaccgagagatttgaac-
|
||||
NC_016065_LCS gccgagacatcctaagagaccaaaagatttgaac-
|
||||
NC_022136_LCS gctgaggcatcctaacagaccggaagatttgaac-
|
||||
NC_014063_LCS gctgagtcatcctaacagaccgatagacttgaac-
|
||||
NC_023121_LCS gccgaggcatactaaaagaccgaaagatttgaac-
|
||||
NC_021110_LCS gccaaggcatcctaacagaccga-agatttgaacc
|
||||
NC_016063_LCS gccaaggcatcctaacagaccga-agatttgaacc
|
||||
NC_025642_LCS gctgagacatcctaacagaccggtagacttgaac-
|
||||
NC_026202_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_009266_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_002202_LCS gctgaggcatcctaacagacccacagacttgaac-
|
||||
NC_025554_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_021111_LCS gctgagacatcctaacagaccggtagacttgaac-
|
||||
NC_023359_LCS gctgaggcatcctaacagaccgatagacttgaac-
|
||||
NC_010776_LCS gctgaggcatcctaacagaccgatagacttgaac-
|
||||
NC_024635_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_025907_LCS gctgaggcatcctaacagaccacaagacttgaac-
|
||||
NC_008336_LCS gctgaggcatcctaacagaccgacagacttgaac-
|
||||
NC_022457_LCS gctgaggcatcctaacagaccgccagacttgaac-
|
||||
NC_023259_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_025909_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_024038_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_014057_LCS gctgaggcatcctaacagaccgatagacttgaac-
|
||||
NC_002694_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_010433_LCS_CMP gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_001666_LCS_CMP gctgaggcatcctaac-gaacgaacgatttgaac-
|
||||
NC_013991_LCS_CMP gctgaggcatcctaacagaccgagagatttgaac-
|
||||
NC_024168_LCS_CMP gccgaggcatcctaacagaccgagaggtttgaac-
|
||||
NC_023356_LCS_CMP gctgaggcatcctaacagaccgatagatttgaac-
|
||||
NC_013707_LCS_CMP gctgaggcatcctaacagaccggtagacttgaa--
|
||||
NC_021372_LCS gctgaggcatcctaacgaac-gaacgatttgaac-
|
||||
NC_007578_LCS gctgaggcatcctaacagaccggtagacttgaacc
|
||||
NC_008454_LCS gctgaggcatcctaacagaccgttagacttgaac-
|
||||
NC_014569_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
||||
NC_026448_LCS gcttaggtatcctaaaagaccgatttatttgaac-
|
||||
|
||||
|
||||
@ -1,496 +1,252 @@
|
||||
>NC_000932_LCS count=162; cluster_center=True; seq_length=103; cluster=NC_000932_LCS; cluster_score=1.0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_001320_LCS count=84; cluster_center=False; seq_length=95; cluster=NC_000932_LCS; cluster_score=0.847619; cluster_weight=559;
|
||||
taaggtagcggcgagacgagccg-------------------------------------
|
||||
----------ttta----------aataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaac-gaacgaacgatttgaac-
|
||||
>NC_004677_LCS count=72; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.961538; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_008115_LCS count=39; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagctg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_006290_LCS count=17; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgatagacttgaac-
|
||||
>NC_007942_LCS count=10; cluster_center=False; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.961538; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttctaatt--aatgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_026134_LCS count=6; cluster_center=False; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.990385; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_011828_LCS count=6; cluster_center=False; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.951923; cluster_weight=559;
|
||||
gaaggtcacggcgagactagccg-------------------------------------
|
||||
----------tttttcatt--aacgataggtgtcaagtggaagtgcagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccgatagacttgaac-
|
||||
>NC_009618_LCS count=5; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_002693_LCS count=5; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.970874; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---atgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgagacatcctaacagaccgctagacttgaac-
|
||||
>NC_005086_LCS count=5; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_009259_LCS count=4; cluster_center=False; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttctaatt--aatgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgttagacttgaac-
|
||||
>NC_024021_LCS count=4; cluster_center=False; seq_length=96; cluster=NC_000932_LCS; cluster_score=0.834951; Strand=1; cluster_weight=559;
|
||||
--aggtcatggcgagacgagccg-------------------------------------
|
||||
----------ttag--------gtgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
gccgaggcatactaaaagaccgaaagatttgaac-
|
||||
>NC_008335_LCS count=4; cluster_center=False; seq_length=91; cluster=NC_000932_LCS; cluster_score=0.883495; Strand=0; cluster_weight=559;
|
||||
-aaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccga------------
|
||||
>NC_026295_LCS count=4; cluster_center=False; seq_length=96; cluster=NC_000932_LCS; cluster_score=0.84466; Strand=1; cluster_weight=559;
|
||||
--aggtcacggcgagacgagccg-------------------------------------
|
||||
----------ttag--------gtgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
gccgaggcatactaaaagaccgaaagatttgaac-
|
||||
>NC_016708_LCS count=4; cluster_center=False; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.980769; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttctcatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_008796_LCS count=3; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.980583; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccaatagacttgaac-
|
||||
>NC_010442_LCS count=3; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.980583; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgatagacttgaac-
|
||||
>NC_021425_LCS count=3; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgttagacttgaac-
|
||||
>NC_007407_LCS count=3; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgccaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_015891_LCS count=3; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_016064_LCS count=3; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951923; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtacagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_001631_LCS count=3; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=1; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttataatt---atgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_005087_LCS count=3; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.923077; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttatcatc---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_021449_LCS count=3; cluster_center=False; seq_length=105; cluster=NC_000932_LCS; cluster_score=0.980952; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_023119_LCS count=2; cluster_center=False; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.941748; Strand=0; cluster_weight=559;
|
||||
-aaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttttcatt---ccgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgaaagatttgaac-
|
||||
>NC_023090_LCS count=2; cluster_center=False; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.971154; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttctcatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gcggaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_015621_LCS count=2; cluster_center=False; seq_length=98; cluster=NC_000932_LCS; cluster_score=0.951456; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagact------
|
||||
>NC_009271_LCS count=2; cluster_center=False; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaa--
|
||||
>NC_003119_LCS count=2; cluster_center=False; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.971154; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttttcatt--aacgataggtgtcaagtggaagtgcagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_007144_LCS count=2; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.980583; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagatgagccg-------------------------------------
|
||||
----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_009766_LCS count=2; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaatagaccggtagacttgaac-
|
||||
>NC_025744_LCS count=2; cluster_center=False; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=1; cluster_weight=559;
|
||||
-aaggtcacggcgagactagccg-------------------------------------
|
||||
-----------ttttcatt--aacgataggtgtcaagtggaagtgcagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccgatagacttgaac-
|
||||
>NC_001568_LCS count=2; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_009765_LCS count=2; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_017006_LCS count=2; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.913462; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttatcacc---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_008829_LCS count=2; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.913462; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttatcact---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagaggtttgaac-
|
||||
>NC_014676_LCS count=2; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggcagacttgaac-
|
||||
>NC_025236_LCS count=1; cluster_center=False; cut=117439..117533; seq_length=95; cluster=NC_000932_LCS; cluster_score=0.838095; Strand=0; cluster_weight=559;
|
||||
taaggtagcggcgagacgagccg-------------------------------------
|
||||
----------ttta----------aataggtgtcaagtggaagtacagtgatgtatg-ca
|
||||
gctgaggcatcctaac-gaacgaacgatttgaac-
|
||||
>NC_023533_LCS count=1; cluster_center=False; cut=117008..117102; seq_length=95; cluster=NC_000932_LCS; cluster_score=0.839623; Strand=0; cluster_weight=559;
|
||||
taaggtagcggcgagacgagccg-------------------------------------
|
||||
----------ttta----------aataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaaccaa-cgaacgatttgaac-
|
||||
>NC_014062_LCS count=1; cluster_center=False; cut=121161..121255; seq_length=95; cluster=NC_000932_LCS; cluster_score=0.838095; Strand=0; cluster_weight=559;
|
||||
taaggtagcggcgagacgagccg-------------------------------------
|
||||
----------ttta----------aataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaat-gaacgaacgatttgaac-
|
||||
>NC_020321_LCS count=1; cluster_center=False; cut=101414..101515; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.893204; Strand=1; cluster_weight=559;
|
||||
taaggtcaaggcgagacgagcct-------------------------------------
|
||||
----------tttatcaa----acgataggtatcaagtggaagtgcagtgatgtacg-ca
|
||||
gctgaggcatcctaacagaccgaaagattttaac-
|
||||
>NC_012818_LCS count=1; cluster_center=False; cut=152550..152652; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.894231; Strand=1; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttatcacc---acgataggtgccaagtggaggtgcagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagaggtttgaac-
|
||||
>NC_022137_LCS count=1; cluster_center=False; cut=150383..150485; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.894231; Strand=1; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttatcacc---acgataggtgccaagtggaggtgcagtgatgcatg-ca
|
||||
gctgaggcatcctaacagaccgagaggtttgaac-
|
||||
>NC_014348_LCS count=1; cluster_center=False; cut=148751..148853; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.895238; Strand=1; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttatcact---acgataggtgctaagtggaggtgcagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagaggtttgaac-
|
||||
>NC_024158_LCS count=1; cluster_center=False; cut=138359..138461; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.913462; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttatcatc---acgataggtgccaggtggaagtgcagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_014699_LCS count=1; cluster_center=False; cut=125720..125822; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.923077; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgccaggtggaagtgcagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_010109_LCS count=1; cluster_center=False; cut=142992..143094; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgagacatcctaacagaccgagagatttgaac-
|
||||
>NC_014592_LCS count=1; cluster_center=False; cut=152146..152248; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.866667; Strand=1; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttatcgcc---acaataggtgctaagtggaggtgcagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagaggtttgaac-
|
||||
>NC_014675_LCS count=1; cluster_center=False; cut=134461..134563; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.903846; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttatcgtc---acgataggtgccaagtggaagtgcagtaatgcatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_024291_LCS count=1; cluster_center=False; cut=119572..119674; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.913462; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttatgatc---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_019628_LCS count=1; cluster_center=False; cut=113128..113230; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.903846; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttatgatc---acgataggtgccaagtggaagtgcagtaatgtatg-ta
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_020146_LCS count=1; cluster_center=False; cut=124175..124277; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.913462; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttatgatt---acgataggtgccaggtggaagtgcagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_015402_LCS count=1; cluster_center=False; cut=111547..111649; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.903846; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttattata---acgataggtgccaagtggaagtgcagtaatgtatg-ta
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_004766_LCS count=1; cluster_center=False; cut=146832..146934; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.895238; Strand=1; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttctcact---acgataggtgctaagtggaagtgcagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagaggtttgaac-
|
||||
>NC_012052_LCS count=1; cluster_center=False; cut=114432..114534; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.913462; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttgttatt---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_001319_LCS count=1; cluster_center=False; cut=113188..113290; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.894231; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcaagactagccg-------------------------------------
|
||||
----------tttattttt---acgataggtgccaagtggaagtgcagtaatgtatg-ta
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_004543_LCS count=1; cluster_center=False; cut=147535..147637; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.884615; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcaagatgagccg-------------------------------------
|
||||
----------tttatcata---acaataggtgccaagtagaagtgcagtaatgtatg-ca
|
||||
gctgaggcattctaacagaccgagagatttgaac-
|
||||
>NC_020259_LCS count=1; cluster_center=False; cut=144766..144868; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.903846; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcaagatgagccg-------------------------------------
|
||||
----------tttatcata---acaataggtgccaagtggaagtgcagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_025659_LCS count=1; cluster_center=False; cut=124686..124788; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcgagacgagcca-------------------------------------
|
||||
----------tttctcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_026775_LCS count=1; cluster_center=False; cut=130118..130220; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------cttatcatt---acgataggtgccaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_026773_LCS count=1; cluster_center=False; cut=131757..131859; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------cttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_025305_LCS count=1; cluster_center=False; cut=135472..135570; seq_length=99; cluster=NC_000932_LCS; cluster_score=0.92233; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
--------------ttatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgaaagatttgaac-
|
||||
>NC_011954_LCS count=1; cluster_center=False; cut=93045..93147; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.932692; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
gctgagacatcctaacagaccgagagatttgaac-
|
||||
>NC_026301_LCS count=1; cluster_center=False; cut=97098..97200; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.914286; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatc---acgataggtgtcaagtggagatgcagtaatgtatg-ca
|
||||
gctgaggcatcctaaaagaccgagagatttgaac-
|
||||
>NC_010654_LCS count=1; cluster_center=False; cut=101596..101698; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.92381; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatc---acgataggtgtcaagtggagatgcagtgatgtatg-ca
|
||||
gctgaggcatcctaaaagaccgagagatttgaac-
|
||||
>NC_026778_LCS count=1; cluster_center=False; cut=126845..126947; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_021936_LCS count=1; cluster_center=False; cut=132851..132953; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcattctaacagaccgagagatttgaac-
|
||||
>NC_026776_LCS count=1; cluster_center=False; cut=134622..134724; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---atgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaatagaccgagagatttgaac-
|
||||
>NC_014056_LCS count=1; cluster_center=False; cut=122521..122623; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttctcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_026449_LCS count=1; cluster_center=False; cut=19564..19668; seq_length=105; cluster=NC_000932_LCS; cluster_score=0.813084; Strand=0; cluster_weight=559;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tgtatcaac---attataggtgccgagtgtaagtgcggcgatgcatg-ca
|
||||
gctgaggcatactaaaagaccgatatattttaac-
|
||||
>NC_024945_LCS count=1; cluster_center=False; cut=109064..109165; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.896226; Strand=1; cluster_weight=559;
|
||||
taaggtcacggcgagatgagccg-------------------------------------
|
||||
----------tttatcag----acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagactaaaagatttgaac-
|
||||
>NC_026785_LCS count=1; cluster_center=False; cut=132320..132422; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
||||
taaggtcacggctagacgagccg-------------------------------------
|
||||
----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_023805_LCS count=1; cluster_center=False; cut=98463..98565; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.894231; Strand=0; cluster_weight=559;
|
||||
taaggtcacggtgagactagccg-------------------------------------
|
||||
----------tttacgact---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctaaggcatcctaatagaccgaaagatttgaac-
|
||||
>NC_024827_LCS count=1; cluster_center=False; cut=111970..112072; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.894231; Strand=1; cluster_weight=559;
|
||||
taaggtcacggtgagactagccg-------------------------------------
|
||||
----------tttacgact---acgataggtgtcaagtggaagtgcagtgatgtatg-ta
|
||||
gctaaggcatcctaacagaccgaaagatttgaac-
|
||||
>NC_020365_LCS count=1; cluster_center=False; cut=133176..133278; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
||||
taaggtcacgtcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagcgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_010548_LCS count=1; cluster_center=False; cut=100631..100732; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.902913; Strand=0; cluster_weight=559;
|
||||
taaggtcatggcgagacgagccg-------------------------------------
|
||||
----------tttattag----acgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
gccgaggcatcctaagagaccggaagatttgaac-
|
||||
>NC_013086_LCS count=1; cluster_center=False; cut=137008..137110; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.885714; Strand=0; cluster_weight=559;
|
||||
tgaggtcacggcaagatgagccg-------------------------------------
|
||||
----------tttatcata---acgataggtgccaggtggaagtgcagtcatgtacg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_006861_LCS count=1; cluster_center=False; cut=143527..143629; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.885714; Strand=0; cluster_weight=559;
|
||||
-aaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttatcatc---acgataggtgccaagtggaaatacagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccaagagatttgaacc
|
||||
>NC_003386_LCS count=1; cluster_center=False; cut=125420..125522; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.885714; Strand=0; cluster_weight=559;
|
||||
-aaggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttattatc---acgataggtgccaagtggaagtgcagtaatgtacg-ca
|
||||
gctgaggcatcctaacagaccgatggctttgaacc
|
||||
>NC_016471_LCS count=1; cluster_center=False; cut=70088..70189; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
||||
-aaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttataatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccaagagatttgaac-
|
||||
>NC_010359_LCS count=1; cluster_center=False; cut=100778..100879; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.923077; Strand=0; cluster_weight=559;
|
||||
-aaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatc---acgataggtgccaggtggaagtgcagtgatgtatg-ta
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_020372_LCS count=1; cluster_center=False; cut=142338..142439; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.961165; Strand=0; cluster_weight=559;
|
||||
-aaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgatagatttgaac-
|
||||
>NC_014582_LCS count=1; cluster_center=False; cut=127077..127178; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.970874; Strand=0; cluster_weight=559;
|
||||
-aaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccagtagacttgaac-
|
||||
>NC_024421_LCS count=1; cluster_center=False; cut=132893..132994; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
||||
-aaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagcgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac-
|
||||
>NC_018114_LCS count=1; cluster_center=False; cut=120740..120842; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.952381; Strand=0; cluster_weight=559;
|
||||
-aaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaacc
|
||||
>NC_026847_LCS count=1; cluster_center=False; cut=142523..142622; seq_length=100; cluster=NC_000932_LCS; cluster_score=0.932039; Strand=0; cluster_weight=559;
|
||||
-aaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---ccaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgcaagacttga---
|
||||
>NC_023120_LCS count=1; cluster_center=False; cut=107871..107972; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.894231; Strand=0; cluster_weight=559;
|
||||
-aaggtcacggtgagactagccg-------------------------------------
|
||||
----------tttacgact---acgataggtgtcaagtggaagtgcagtgatgtatg-ta
|
||||
gctaaggcatcctaacagaccgaaagatttgaac-
|
||||
>NC_014874_LCS count=1; cluster_center=False; cut=41650..41752; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.885714; Strand=0; cluster_weight=559;
|
||||
-aaggtcacggttagacgagccg-------------------------------------
|
||||
----------tttattatt---atgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
gctgaggcatactaacagaccgagagattttaacc
|
||||
>NC_011942_LCS count=1; cluster_center=False; cut=39883..39972; seq_length=90; cluster=NC_000932_LCS; cluster_score=0.8; Strand=0; cluster_weight=559;
|
||||
-------------agacgagccg-------------------------------------
|
||||
----------tttatcatc---acgataggtgtcaagtggagatgcagtaatgtatg-ca
|
||||
gctgaggcatcctaaaagaccgagagatttgaac-
|
||||
>NC_016065_LCS count=1; cluster_center=False; cut=58742..58843; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.803738; Strand=0; cluster_weight=559;
|
||||
agaggtcttggcgagactagcca-------------------------------------
|
||||
----------gcgattag----acgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
gccgagacatcctaagagaccaaaagatttgaac-
|
||||
>NC_022136_LCS count=1; cluster_center=False; cut=152638..152740; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.932039; Strand=1; cluster_weight=559;
|
||||
caaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttctcatc---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccggaagatttgaac-
|
||||
>NC_014063_LCS count=1; cluster_center=False; cut=89893..89996; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
||||
caaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttttcatt--aacgataggtgtcaagtggaagtgcagtaatgtatg-ca
|
||||
gctgagtcatcctaacagaccgatagacttgaac-
|
||||
>NC_023121_LCS count=1; cluster_center=False; cut=57558..57654; seq_length=97; cluster=NC_000932_LCS; cluster_score=0.84466; Strand=0; cluster_weight=559;
|
||||
-caggtcacggcgagacgagccg-------------------------------------
|
||||
----------ttag--------gtgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
gccgaggcatactaaaagaccgaaagatttgaac-
|
||||
>NC_021110_LCS count=1; cluster_center=False; cut=105447..105548; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.87619; Strand=0; cluster_weight=559;
|
||||
cgaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcag----acgataggtgttaagtgaaagtacagtgatgtatg-ca
|
||||
gccaaggcatcctaacagaccga-agatttgaacc
|
||||
>NC_016063_LCS count=1; cluster_center=False; cut=106726..106827; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.885714; Strand=0; cluster_weight=559;
|
||||
cgaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcag----acgataggtgttaagtgaaagtgcagtgatgtatg-ca
|
||||
gccaaggcatcctaacagaccga-agatttgaacc
|
||||
>NC_025642_LCS count=1; cluster_center=False; cut=69137..69239; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.970874; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagcca-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtgtaagtgcagtgatgtatg-ca
|
||||
gctgagacatcctaacagaccggtagacttgaac-
|
||||
>NC_026202_LCS count=1; cluster_center=False; cut=129378..129480; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttataatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_009266_LCS count=1; cluster_center=False; cut=130502..130604; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_002202_LCS count=1; cluster_center=False; cut=128763..128865; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.970874; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagacccacagacttgaac-
|
||||
>NC_025554_LCS count=1; cluster_center=False; cut=135213..135315; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgtagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_021111_LCS count=1; cluster_center=False; cut=32758..32860; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.980583; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtgtaagtgcagtgatgtatg-ca
|
||||
gctgagacatcctaacagaccggtagacttgaac-
|
||||
>NC_023359_LCS count=1; cluster_center=False; cut=127655..127757; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.980583; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtgtaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgatagacttgaac-
|
||||
>NC_010776_LCS count=1; cluster_center=False; cut=136579..136681; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.980583; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaggtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgatagacttgaac-
|
||||
>NC_024635_LCS count=1; cluster_center=False; cut=108314..108416; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.980583; Strand=1; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---ataataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_025907_LCS count=1; cluster_center=False; cut=127320..127422; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951456; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---ccaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccacaagacttgaac-
|
||||
>NC_008336_LCS count=1; cluster_center=False; cut=133098..133200; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.961165; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttattatt---acgataggtgtcaagtggaagtgcagcgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgacagacttgaac-
|
||||
>NC_022457_LCS count=1; cluster_center=False; cut=131133..131235; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.970874; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttattatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgccagacttgaac-
|
||||
>NC_023259_LCS count=1; cluster_center=False; cut=137002..137104; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttattatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_025909_LCS count=1; cluster_center=False; cut=127251..127354; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.971154; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttctaatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_024038_LCS count=1; cluster_center=False; cut=106484..106587; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=1; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttctaatt--aacgataggtgtcaggtggaagtgcagtaatgtacg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_014057_LCS count=1; cluster_center=False; cut=42962..43065; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttttcatt--aacgataggtgtcaagtggaagtacagtaatgtatg-ca
|
||||
gctgaggcatcctaacagaccgatagacttgaac-
|
||||
>NC_002694_LCS count=1; cluster_center=False; cut=127517..127620; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.980769; Strand=0; cluster_weight=559;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttttcatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac-
|
||||
>NC_010433_LCS_CMP complemented=True; count=19; cluster_center=True; seq_length=103; cluster=NC_010433_LCS; cluster_score=1.0; cluster_weight=28;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac
|
||||
>NC_001666_LCS_CMP complemented=True; count=4; cluster_center=False; seq_length=95; cluster=NC_010433_LCS; cluster_score=0.847619; cluster_weight=28;
|
||||
taaggtagcggcgagacgagccg-------------------------------------
|
||||
----------ttta----------aataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaac-gaacgaacgatttgaac
|
||||
>NC_013991_LCS_CMP complemented=True; count=2; cluster_center=False; seq_length=103; cluster=NC_010433_LCS; cluster_score=0.961538; cluster_weight=28;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgagagatttgaac
|
||||
>NC_024168_LCS_CMP complemented=True; count=1; cluster_center=False; cut=129161..129258; seq_length=98; cluster=NC_010433_LCS; cluster_score=0.826923; Strand=1; cluster_weight=28;
|
||||
--aggtcacggcaagacgagccg-------------------------------------
|
||||
----------tttt---ag---acaataggtgccaggtggaagcgcagtaatgtgtg-ca
|
||||
gccgaggcatcctaacagaccgagaggtttgaac
|
||||
>NC_023356_LCS_CMP complemented=True; count=1; cluster_center=False; cut=79931..80033; seq_length=103; cluster=NC_010433_LCS; cluster_score=0.961165; Strand=0; cluster_weight=28;
|
||||
taaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---atgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgatagatttgaac
|
||||
>NC_013707_LCS_CMP complemented=True; count=1; cluster_center=False; cut=132910..133011; seq_length=102; cluster=NC_010433_LCS; cluster_score=0.990291; Strand=1; cluster_weight=28;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaa-
|
||||
>NC_021372_LCS count=3; cluster_center=True; seq_length=104; cluster=NC_021372_LCS; cluster_score=1.0; Strand=0; cluster_weight=3;
|
||||
taaggtagcggcgagacgagccg-------------------------------------
|
||||
----------ttt----------aaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacgaac-gaacgatttgaac
|
||||
>NC_007578_LCS count=1; cluster_center=True; cut=129597..129859; seq_length=263; cluster=NC_007578_LCS; cluster_score=1.0; Strand=0; cluster_weight=1;
|
||||
gaaggtcacggcgagacgagccg-------------------------------------
|
||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaacc
|
||||
>NC_008454_LCS count=1; cluster_center=True; cut=197495..197626; seq_length=132; cluster=NC_008454_LCS; cluster_score=1.0; Strand=1; cluster_weight=1;
|
||||
gaaggtcacggcgagacgagccg------------------tttatcatattactcaatt
|
||||
gatcattacgtttatcatt---acgataggtgttaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccgttagacttgaac
|
||||
>NC_014569_LCS count=1; cluster_center=True; cut=102326..102478; seq_length=153; cluster=NC_014569_LCS; cluster_score=1.0; Strand=0; cluster_weight=1;
|
||||
gaaggtcacggcgagacgagccgtttgttttagagtgtcaaagtcttgagaattcaggcg
|
||||
cggcccgtcctttagagcaaaacaaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
||||
gctgaggcatcctaacagaccggtagacttgaac
|
||||
>NC_026448_LCS count=1; cluster_center=True; cut=12936..13042; seq_length=107; cluster=NC_026448_LCS; cluster_score=1.0; Strand=0; cluster_weight=1;
|
||||
taaggtcgcggcgagatgatccg-------------------------------------
|
||||
----------ttgatagtgactatgataggtactaagtgtaaatgcagcgatgtatgtta
|
||||
gcttaggtatcctaaaagaccgatttatttgaac
|
||||
>RRNA4.5S_NC_010548_83 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.902913; cluster_center=False;
|
||||
TAAGGTCATGGCGAGACGAGCCG--TTTATTAG--ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGCATGCAGCCGAGGCATCCTAAGAGACCGGAAGATTTGAAC
|
||||
>RRNA4.5S_NC_022136_103 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.932039; cluster_center=False;
|
||||
CAAGGTCACGGCGAGACGAGCCG--TTTCTCATC-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGGAAGATTTGAAC
|
||||
>RRNA4.5S_NC_012052_62 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.913462; cluster_center=False;
|
||||
TAAGGTCACGGCAAGACGAGCCG--TTTGTTATT-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_020259_65 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.903846; cluster_center=False;
|
||||
TAAGGTCACGGCAAGATGAGCCG--TTTATCATA-ACAATAGGTGCCAAGTGGAAGTGCA
|
||||
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_015402_60 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.903846; cluster_center=False;
|
||||
TAAGGTCACGGCAAGACGAGCCG--TTTATTATA-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||
GTAATGTATGTAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_008829_37 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.913462; cluster_center=False;
|
||||
TAAGGTCACGGCAAGACGAGCCG--TTTATCACT-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGGTTTGAAC
|
||||
>RRNA4.5S_NC_014675_56 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.903846; cluster_center=False;
|
||||
TAAGGTCACGGCAAGACGAGCCG--TTTATCGTC-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||
GTAATGCATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_024158_52 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.913462; cluster_center=False;
|
||||
TAAGGTCACGGCAAGACGAGCCG--TTTATCATC-ACGATAGGTGCCAGGTGGAAGTGCA
|
||||
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_020146_59 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.913462; cluster_center=False;
|
||||
TAAGGTCACGGCAAGACGAGCCG--TTTATGATT-ACGATAGGTGCCAGGTGGAAGTGCA
|
||||
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_014699_53 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.923077; cluster_center=False;
|
||||
TAAGGTCACGGCAAGACGAGCCG--TTTATCATT-ACGATAGGTGCCAGGTGGAAGTGCA
|
||||
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_017006_34 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.913462; cluster_center=False;
|
||||
TAAGGTCACGGCAAGACGAGCCG--TTTATCACC-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_005087_28 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.923077; cluster_center=False;
|
||||
TAAGGTCACGGCAAGACGAGCCG--TTTATCATC-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_019628_58 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.903846; cluster_center=False;
|
||||
TAAGGTCACGGCAAGACGAGCCG--TTTATGATC-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||
GTAATGTATGTAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_024291_57 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.913462; cluster_center=False;
|
||||
TAAGGTCACGGCAAGACGAGCCG--TTTATGATC-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_014063_104 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||
CAAGGTCACGGCGAGACGAGCCG--TTTTTCATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTAATGTATGCAGCTGAGTCATCCTAACAGACCGATAGACTTGAAC
|
||||
>RRNA4.5S_NC_014057_126 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTTTCATTAACGATAGGTGTCAAGTGGAAGTACA
|
||||
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGATAGACTTGAAC
|
||||
>RRNA4.5S_NC_024035_9 count=6; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACTAGCCG--TTTTTCATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGATAGACTTGAAC
|
||||
>RRNA4.5S_NC_025745_29 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||
-AAGGTCACGGCGAGACTAGCCG---TTTTCATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGATAGACTTGAAC
|
||||
>RRNA4.5S_NC_026847_97 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.932039; cluster_center=False;
|
||||
-AAGGTCACGGCGAGACGAGCCG--TTTATCATT-CCAATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGCAAGACTTGA--
|
||||
>RRNA4.5S_NC_025907_119 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951456; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-CCAATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCACAAGACTTGAAC
|
||||
>RRNA4.5S_NC_026301_71 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.914286; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCG--TTTATCATC-ACGATAGGTGTCAAGTGGAGATGCA
|
||||
GTAATGTATGCAGCTGAGGCATCCTAAAAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_010654_72 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.923810; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCG--TTTATCATC-ACGATAGGTGTCAAGTGGAGATGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAAAAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_010359_92 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.923077; cluster_center=False;
|
||||
-AAGGTCACGGCGAGACGAGCCG--TTTATCATC-ACGATAGGTGCCAGGTGGAAGTGCA
|
||||
GTGATGTATGTAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_010360_11 count=5; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.970874; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ATGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGACATCCTAACAGACCGCTAGACTTGAAC
|
||||
>RRNA4.5S_NC_024038_124 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTCTAATTAACGATAGGTGTCAGGTGGAAGTGCA
|
||||
GTAATGTACGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_008336_120 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.961165; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATTATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GCGATGTATGCAGCTGAGGCATCCTAACAGACCGACAGACTTGAAC
|
||||
>RRNA4.5S_NC_022457_121 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.970874; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATTATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGCCAGACTTGAAC
|
||||
>RRNA4.5S_NC_025642_108 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.970874; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCA--TTTATCATT-ACGATAGGTGTCAAGTGTAAGTGCA
|
||||
GTGATGTATGCAGCTGAGACATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_021111_115 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980583; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGTAAGTGCA
|
||||
GTGATGTATGCAGCTGAGACATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_002202_112 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.970874; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCCACAGACTTGAAC
|
||||
>RRNA4.5S_NC_015983_30 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980583; cluster_center=False;
|
||||
GAAGGTCACGGCGAGATGAGCCG--TTTATCATC-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_009259_14 count=4; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTCTAATTAATGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGTTAGACTTGAAC
|
||||
>RRNA4.5S_NC_025909_123 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.971154; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTCTAATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_021646_7 count=10; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.961538; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTCTAATTAATGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_023259_122 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATTATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_026202_109 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATAATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_026681_38 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.971154; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTCTCATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCGGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_026676_17 count=4; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980769; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTCTCATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_001568_41 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_022391_4 count=39; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCTG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_021423_39 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGCAGACTTGAAC
|
||||
>RRNA4.5S_NC_009963_42 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAATAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_009266_111 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGCATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_025554_114 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGTA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_026677_8 count=6; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990385; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_025652_20 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980952; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCGTTTTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_000932_1 count=162; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=1.000000; cluster_center=True;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_018565_33 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAA-
|
||||
>RRNA4.5S_NC_023833_36 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951456; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACT-----
|
||||
>RRNA4.5S_NC_003119_31 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.971154; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTTTCATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_002694_127 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980769; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTTTCATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_021425_22 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGTTAGACTTGAAC
|
||||
>RRNA4.5S_NC_008796_27 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980583; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCAATAGACTTGAAC
|
||||
>RRNA4.5S_NC_023359_116 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980583; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGTAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGATAGACTTGAAC
|
||||
>RRNA4.5S_NC_010776_117 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980583; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAGGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGATAGACTTGAAC
|
||||
>RRNA4.5S_NC_023357_6 count=17; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGATAGACTTGAAC
|
||||
>RRNA4.5S_NC_014582_94 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.970874; cluster_center=False;
|
||||
-AAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACAATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCAGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_024732_26 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980583; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACAATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGATAGACTTGAAC
|
||||
>RRNA4.5S_NC_024635_118 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980583; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ATAATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_009765_35 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACAATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||
>RRNA4.5S_NC_026450_32 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.941748; cluster_center=False;
|
||||
-AAGGTCACGGCGAGACGAGCCG--TTTTTCATT-CCGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAAAGATTTGAAC
|
||||
>RRNA4.5S_NC_025305_69 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.922330; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCG--TT----ATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAAAGATTTGAAC
|
||||
>RRNA4.5S_NC_025659_66 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCA--TTTCTCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_014056_76 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCG--TTTCTCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_020372_93 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.961165; cluster_center=False;
|
||||
-AAGGTCACGGCGAGACGAGCCG--TTTATCATC-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGATAGATTTGAAC
|
||||
>RRNA4.5S_NC_024542_12 count=5; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCG--TTTATCATC-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_011954_70 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.932692; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCG--TTTATCATC-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGCATGCAGCTGAGACATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_009618_10 count=5; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCG--TTTATCATC-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGCATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_020365_82 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||
TAAGGTCACGTCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GCGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_024421_95 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||
-AAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GCGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_010109_54 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||
TAAGGTCACGGCAAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGACATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_015891_19 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||
TAAGGTCACGGCAAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_026299_24 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_026773_68 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCG--CTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_026775_67 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCG--CTTATCATT-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_026785_79 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||
TAAGGTCACGGCTAGACGAGCCG--TTTATCATT-ACAATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_026778_73 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACAATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_025306_25 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTACA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_021936_74 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATTCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_025664_3 count=72; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.961538; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_018114_96 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.952381; cluster_center=False;
|
||||
-AAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_016471_91 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||
-AAGGTCACGGCGAGACGAGCCG--TTTATAATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCAAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_026776_75 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ATGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAATAGACCGAGAGATTTGAAC
|
||||
>RRNA4.5S_NC_001631_23 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||
TAAGGTCACGGCGAGACGAGCCG--TTTATAATT-ATGATAGGTGTCAAGTGGAAGTGCA
|
||||
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||
|
||||
380
data/rrna/5S.goodali.fst
Normal file
380
data/rrna/5S.goodali.fst
Normal file
@ -0,0 +1,380 @@
|
||||
>RRNA5S_NC_014573_209 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.909836; cluster_center=False;
|
||||
AGTTCTGGTGTCCTATGCCTAGAGGAAACACACCAATCCATACCGAATTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGTAGACCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_013086_133 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.909091; cluster_center=False;
|
||||
TATTCTGGTGTCTTAGTCGTAGAGGAACCACACCAATCCATCCCGAACTCGGTGGTGAAA
|
||||
CTCTACTGCGGTGACGATACTGCAGGGGAAGCCCCG-CGG-GAAAATAGCTCGGCGCCAG
|
||||
GGT
|
||||
>RRNA5S_NC_014348_67 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.902439; cluster_center=False;
|
||||
TATTCTGGTGTCCCAGGCGTAGAGGAACCACACCGATCCATCTCGAACTTGGTGGTGAAA
|
||||
CTCTACCGCGGTAACAATACTGCAGGGGGGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_020146_24 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.917355; cluster_center=False;
|
||||
TATTCTGGTGTCTTAGGCGTAGGGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||
CTCTACTGCGGTGACAATACTATAGGGGAAGCCCTG-TGG-GAAGATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_004543_174 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.900826; cluster_center=False;
|
||||
--TTCTGGTGTCTTAGGCGTAGAGGAACCACACCAATCCATTCCGAACTTGGTGGTGAAA
|
||||
CTTTACTGCGGTGACAATACTGTAGGGGAAGCCCTG-TGG-AAAGATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_014675_134 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.925620; cluster_center=False;
|
||||
TATTCTGGTGTCTTGGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||
CTCTACCGCGGTGACAATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGGCGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_001319_172 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.909091; cluster_center=False;
|
||||
--TTCTGGTGTCTTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||
CTCTATTGCGGTGACAATACTTTAGGGGAAGCCCTA-TGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_026212_18 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.950413; cluster_center=False;
|
||||
TATTCTGGTGTCTTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||
CTCTACTGCGGTGACAATACTGTAGGGGAAGCCCTA-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_025668_171 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.933884; cluster_center=False;
|
||||
--TTCTGGTGTCTTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||
CTCTACTGCGGTGACAATACTGTAGGGGAAGCCCTA-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_012052_173 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.925620; cluster_center=False;
|
||||
--TTCTGGTGTCTTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||
CTTTACTGCGGTGACAATACTGTAGGGGAAGCCCTA-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_017006_131 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.918033; cluster_center=False;
|
||||
TATTCTGGTGTCTCAGGCGTGGGGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-GAAAATAACTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_008829_38 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.917355; cluster_center=False;
|
||||
--TTCTGGTGTCTTAGGCGTGGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||
CTCTACTGCGGTGACAATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_003386_48 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.934426; cluster_center=False;
|
||||
ATTTCTGGTGTCCTAGGCGTGGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||
CTCTACTGCGGTGACAATACTGTAGGGGAAGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_006861_45 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.918033; cluster_center=False;
|
||||
-ATTCTGGTGTCTCAGGCGTGGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCCACTGCGGTGACAATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGATGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_020147_170 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.902439; cluster_center=False;
|
||||
--TTCTGGTGTCTCAGGCGTGGGGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||
CCCTACTGCGGTGACGATACTGTAGGGGGAGCCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_026296_10 count=6; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.909836; cluster_center=False;
|
||||
AATTCTGGTGTCTCAGGCGTAGGGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTTTACTGCGGTGACGATACTGCAGGGGAAGCCCTG-TGG-AAAAATAGCTCGATGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_024024_14 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.909836; cluster_center=False;
|
||||
AATTCTGGTGTCTGAGGCGTAGGGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTTTACTGCGGTGACGATACTGCAGGGGAAGCCCTG-TGG-AAAAATAGCTCGATGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_024945_203 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.942623; cluster_center=False;
|
||||
AATTCTGGTGTCTCAGGCGTAGGGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_020321_204 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.934426; cluster_center=False;
|
||||
AATTCTGGTGTCTCAGGCGTAGGGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_009765_95 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.950413; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAAAGGACCCACACCAATCCATCTCGAACTTGGTAGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGAGAGGTCCTG-CGG-AAAAATAGCTCTACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_009949_96 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.958678; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAAAGGACCCACACCAATCCATCTCGAACTTGGTAGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCTACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_014589_39 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.910569; cluster_center=False;
|
||||
-ATTCTGGTGTCCCAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTA-TGG-GAAAATAGCTCGGTGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_011156_202 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.918033; cluster_center=False;
|
||||
AATTCTGGTGTCCCAGGCATAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGGAGCCCTG-CGG-GAAAATAGCTCGGTGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_011158_11 count=5; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.925620; cluster_center=False;
|
||||
AATTCTGGTGTCCCAGGCATAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGGTGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_016064_74 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.933884; cluster_center=False;
|
||||
GATTCTGGTGTCCAAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGGTGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_016058_201 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.933884; cluster_center=False;
|
||||
AATTCTGGTGTCCAAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGGTGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_021456_33 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.925620; cluster_center=False;
|
||||
AATTCTGGTGTCCCAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTATAGGGGAAGCCCTG-CGG-GAAAATAGCTCGGTGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_011153_22 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.933884; cluster_center=False;
|
||||
AATTCTGGTGTCCCAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGGTGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_011930_30 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.933884; cluster_center=False;
|
||||
GATTCTGGTGTCCCAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGGTGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_014575_40 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.933884; cluster_center=False;
|
||||
-ATTCTGGTGTCCCAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGGTGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_026778_120 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.934426; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTGAAA
|
||||
CTCTACTGTGGTGACAATACTGTAGGGGGGGCCTTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_014582_126 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.950413; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAAGGACACCAACCCATCCCGAATTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGGCGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_022927_119 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.950413; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTGAAA
|
||||
CTCTACTGCGATGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_023119_32 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.950413; cluster_center=False;
|
||||
GATTCTGGTGTCCCAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTAGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_001568_127 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTATAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
TTATACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_026040_89 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.950413; cluster_center=False;
|
||||
TATCCTGGTGCCCTAGGCGTGGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGCAGGGGAAGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_016471_115 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.950413; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGTGGTGACAATACTGTAGGGGGGGCCCCG-CGG-AAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_005086_94 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
TATTCTGGTGCCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTGGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_009600_93 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
TATTCTGGTGCCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGGGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_021936_125 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.966942; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAAGCACACCAATCCATCCCGAATTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_025906_128 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.958678; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTGGAGGAAGCACACCAATCCATACCGAATTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_015083_130 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.958678; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGTCGTAGAGGAAGCACACCAATCCATACCGAATTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_024635_16 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.966942; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAAGCACACCAATCCATACCGAATTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_002762_2 count=89; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.966942; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-CAAAATAGCTCGATGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_025237_124 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.966942; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-TAAAATAGCTCGATGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_025305_122 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTA-CGG-AAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_018112_6 count=20; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACAACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGAGAGGTCCTG-CGG-CAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_024827_19 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||
TATTCTGGTGTCCCAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_009266_31 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACAACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTTTACTGCGGTGACGATACTGTAGGGGAAGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_026779_34 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.966942; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTTTACTGCGGTGACGATACTGTAGGGGGGGTTCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_009618_35 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTGGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_016708_116 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.966942; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTATTGCGGTGACGATACTGTAGGAGAGGTCCTG-CGG-CAAAATAGCTCGGCGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_014056_114 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGGGGTCCTG-CGG-AAAAATAGCTAGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_026772_5 count=22; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGGGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_018114_42 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.959016; cluster_center=False;
|
||||
-ATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGGGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_026775_102 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.966942; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGGGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_026773_113 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGGGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_024736_20 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGCGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_025642_103 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGCGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_026299_21 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_026076_99 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_009269_9 count=17; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACAACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_009273_98 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.916031; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACAACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_026446_41 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975410; cluster_center=False;
|
||||
-ATTCTGGTGTCCTAGGCGTAGAGGAACAACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTGCCGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_024064_7 count=17; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGAAGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_024732_23 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_009601_29 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTGGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_021449_104 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTAACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_026785_105 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGCAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_018552_110 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTA-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_024813_117 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTATTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_024421_44 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
-ATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_026786_4 count=26; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
AAT
|
||||
>RRNA5S_NC_009808_151 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||
TCTTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_026703_168 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
--TTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_009599_43 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983607; cluster_center=False;
|
||||
-ATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGGAAAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_002693_111 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GA-
|
||||
>RRNA5S_NC_004993_1 count=177; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=1.000000; cluster_center=True;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_023260_112 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_015621_36 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.925620; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGA------
|
||||
---
|
||||
>RRNA5S_NC_008407_100 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCA-CCCGAATTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_023357_12 count=5; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-GAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_008454_121 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_016728_15 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-GAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_023115_123 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_011163_108 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGGCGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_024038_109 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-GAAAATAGCTCGGCGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_020372_92 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
TATTCTGGTGCCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_026565_27 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_024166_107 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGAGAGGTCCTG-CGG-AAAAATAGCTCGGCGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_022451_106 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGAGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_024542_17 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
TATTCTGGTGCCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGGCGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_026676_101 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTAGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGGCGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_024035_118 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTTTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGGCGCCAG
|
||||
GAT
|
||||
>RRNA5S_NC_021649_3 count=29; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGGCGCCAG
|
||||
GAT
|
||||
18
data/rrna/README
Normal file
18
data/rrna/README
Normal file
@ -0,0 +1,18 @@
|
||||
Commands used to build the plast_RRNA.hmm
|
||||
|
||||
hmmbuild --dna -n RRNA_23S --wpb plast_RRNA_23S.hmm 23S.goodali.fst
|
||||
hmmbuild --dna -n RRNA_16S --wpb plast_RRNA_16S.hmm 16S.goodali.fst
|
||||
hmmbuild --dna -n RRNA_5S --wpb plast_RRNA_5S.hmm 5S.goodali.fst
|
||||
hmmbuild --dna -n RRNA_4.5S --wpb plast_RRNA_4.5S.hmm 4.5S.goodali.fst
|
||||
|
||||
revcomp 23S.goodali.fst > 23S.goodali.rc.fst
|
||||
revcomp 16S.goodali.fst > 16S.goodali.rc.fst
|
||||
revcomp 5S.goodali.fst > 5S.goodali.rc.fst
|
||||
revcomp 4.5S.goodali.fst > 4.5S.goodali.rc.fst
|
||||
|
||||
hmmbuild --dna -n RRNA_23S_RC --wpb plast_RRNA_23S_RC.hmm 23S.goodali.rc.fst
|
||||
hmmbuild --dna -n RRNA_16S_RC --wpb plast_RRNA_16S_RC.hmm 16S.goodali.rc.fst
|
||||
hmmbuild --dna -n RRNA_5S_RC --wpb plast_RRNA_5S_RC.hmm 5S.goodali.rc.fst
|
||||
hmmbuild --dna -n RRNA_4.5S_RC --wpb plast_RRNA_4.5S_RC.hmm 4.5S.goodali.rc.fst
|
||||
|
||||
cat plast_RRNA_*.hmm > plast_RRNA.hmm
|
||||
BIN
data/rrna/RRNA_16S/.DS_Store
vendored
Normal file
BIN
data/rrna/RRNA_16S/.DS_Store
vendored
Normal file
Binary file not shown.
@ -0,0 +1,3 @@
|
||||
>RRNA16S_NC_001865_139 count=1; cluster_weight=1; cluster=RRNA16S_NC_001865_139; cluster_score=1.000000; cluster_center=True;
|
||||
TCACTACCTTGTATTCTTGCTTGCATGGAACCACCTTATCCATCTCGAACTAAGAAGTGA
|
||||
AACGTGTAAGGGGCGACAATACTTGAGGGGAGGCCCTCTGGAAAGATAGCCTAATGCA
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_001865_139.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_001865_139.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_001865_139 count=1; cluster_weight=1; cluster=RRNA16S_NC_001865_139; cluster_score=1.000000; cluster_center=True;
|
||||
tcactaccttgtattcttgcttgcatggaaccaccttatccatctcgaactaagaagtgaaacgtgtaaggggcgacaatacttgaggggaggccctctggaaagatagcctaatgca
|
||||
@ -0,0 +1,3 @@
|
||||
>RRNA16S_NC_002186_383 count=1; cluster_weight=1; cluster=RRNA16S_NC_002186_383; cluster_score=1.000000; cluster_center=True;
|
||||
ATCCTGGCATCGAGCTATTTTTCCATAGAGCTACCTCTAAAGTATTTTTGCCGCTGCAAT
|
||||
GTTTCACAACCAAGTTCGGGATGGATTGGTGTGGTTCCACTGCGCTAAAGACACCAGGAT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_002186_383.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_002186_383.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_002186_383 count=1; cluster_weight=1; cluster=RRNA16S_NC_002186_383; cluster_score=1.000000; cluster_center=True;
|
||||
atcctggcatcgagctatttttccatagagctacctctaaagtatttttgccgctgcaatgtttcacaaccaagttcgggatggattggtgtggttccactgcgctaaagacaccaggat
|
||||
@ -0,0 +1,4 @@
|
||||
>RRNA16S_NC_004115_102 count=1; cluster_weight=1; cluster=RRNA16S_NC_004115_102; cluster_score=1.000000; cluster_center=True;
|
||||
GATTCTGGCATCGAGCTATCTTTCCACAGAGCTGCCCCTGAAGTATTGTCACCGCAGTAG
|
||||
AGTTTCACCACCAAGTTCGGGATGGATTGGTGTGGGGCCTCTACGCCTAAGACACCAGAA
|
||||
TA
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_004115_102.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_004115_102.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_004115_102 count=1; cluster_weight=1; cluster=RRNA16S_NC_004115_102; cluster_score=1.000000; cluster_center=True;
|
||||
gattctggcatcgagctatctttccacagagctgcccctgaagtattgtcaccgcagtagagtttcaccaccaagttcgggatggattggtgtggggcctctacgcctaagacaccagaata
|
||||
@ -0,0 +1,4 @@
|
||||
>RRNA16S_NC_004677_107 count=1; cluster_weight=1; cluster=RRNA16S_NC_004677_107; cluster_score=1.000000; cluster_center=True;
|
||||
GCTTTTCTCGCATTTATGCCCTTCCTCGTTCATGGTTTGAAATTCTGGTGTCCCAGGCAT
|
||||
AGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATAC
|
||||
TGTAGGGGGAGCCCTGCGGGAAAATAGCTCGGTGCCAGGAT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_004677_107.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_004677_107.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_004677_107 count=1; cluster_weight=1; cluster=RRNA16S_NC_004677_107; cluster_score=1.000000; cluster_center=True;
|
||||
gcttttctcgcatttatgcccttcctcgttcatggtttgaaattctggtgtcccaggcatagaggaaccacaccaacccatcccgaacttggtggttaaactctactgcggtgacgatactgtagggggagccctgcgggaaaatagctcggtgccaggat
|
||||
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_008097_328.align.fasta
Normal file
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_008097_328.align.fasta
Normal file
@ -0,0 +1,26 @@
|
||||
>RRNA16S_NC_008097_328 count=1; cluster_weight=1; cluster=RRNA16S_NC_008097_328; cluster_score=1.000000; cluster_center=True;
|
||||
TGAGCTAATAGCCCATCATTTTGGAAGATTAGGCCCCTTACCTTATTTATTCGTTCTGAA
|
||||
TTATGATTTTGAGAATTGATTCTTAATTCTGAATTTCAGTAGGATATAAGGGCCTAAATC
|
||||
AGTTCTGTATGATCTAGAAAAAACTGCAAATTTGTAGCAGTAACTCATTCTCCCTTAAAA
|
||||
GGAGGTGATCCAGCCGCACCTTCCAGTACGGCTACCTTGTTACGACTTCACTCCAGTCAC
|
||||
TAGCCCTGCCTTCGGCATCCCCCTCCTTAAATAATTTAAGGTTAGGGTAACGACTTCGGG
|
||||
CATGGTCAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGGATTCACCG
|
||||
CCGTATGGCTGACCGGCGATTACTAGCGATTCCGCCTTGATGCAGGCGAGTTGCAGCCTG
|
||||
CAATCCGAACTGAGACCGGGTTTTTGAGGTTAGCTCGCCTTCGCAGGGTTGCAACTCTTT
|
||||
GTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGATGTAAGGGGCATGCTGACTTGACGTC
|
||||
ATCCTCACCTTCCTCCGGATTATCACCGGCAGTCTCTCTAGAGTTCCATAATGGCAACTA
|
||||
GAAACGAGGGTTGCGCTCGTTGCGGGACTTAACCCAACATCTCACGACACGAGCTGACGA
|
||||
CAGCCATGCACCACCTGTATCCGTGTTCCCGAAGGCACTCCCTCTTTTCAGAGGGACTCA
|
||||
CAGTATGTCAAACCCTGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCAC
|
||||
CGCTTGTGCGGGCCCCCGTCAATTCCTTTGAGTTTCACTCTTGCGAGCGTACTCCCCAGG
|
||||
CGGGACACTTAACGCGTTAGCTCCAGCACTGAACGGATCAAATCGTCCAGCACTTAGTGT
|
||||
CCATCGTTTACAGCTAGGACTACTGGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGT
|
||||
CTCTCAGTGTCAGTATCGGCCCAGCAGAGTGCTTTCGCCTTGGGCGTTCTTTCCGATATC
|
||||
TACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCTCTACCGGACTCCAGCTTAGTAG
|
||||
TTTCTGCTGCCTGTCTAGGGTTAAGCCCTAGTTTTTAACAGCAGACTGAAAAAGCCACCT
|
||||
ACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTACCGCGGCT
|
||||
GCTGGCACAGAGTTAGCCGATGCTTATTCTTCAGATACCGTCATGATTTCGTCTCTGAAA
|
||||
AAAGGAGTTTACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTC
|
||||
GCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTC
|
||||
CCAGTGTGGCTGATCATCCTCTCAGATCAGCTACTGATCGTTGCCTTGGTAAGCGATTAC
|
||||
CTCACCAACTAGCTAATCAGACGCAAGTCTCTCCTAGGGCGGATTCCTCCTTTTACTCCT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008097_328.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008097_328.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_008097_328 count=1; cluster_weight=1; cluster=RRNA16S_NC_008097_328; cluster_score=1.000000; cluster_center=True;
|
||||
tgagctaatagcccatcattttggaagattaggccccttaccttatttattcgttctgaattatgattttgagaattgattcttaattctgaatttcagtaggatataagggcctaaatcagttctgtatgatctagaaaaaactgcaaatttgtagcagtaactcattctcccttaaaaggaggtgatccagccgcaccttccagtacggctaccttgttacgacttcactccagtcactagccctgccttcggcatccccctccttaaataatttaaggttagggtaacgacttcgggcatggtcagctcccatagtgtgacgggcggtgtgtacaaggcccgggaacggattcaccgccgtatggctgaccggcgattactagcgattccgccttgatgcaggcgagttgcagcctgcaatccgaactgagaccgggtttttgaggttagctcgccttcgcagggttgcaactctttgtcccggccattgtagcacgtgtgtcgcccaggatgtaaggggcatgctgacttgacgtcatcctcaccttcctccggattatcaccggcagtctctctagagttccataatggcaactagaaacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacgagctgacgacagccatgcaccacctgtatccgtgttcccgaaggcactccctcttttcagagggactcacagtatgtcaaaccctggtaaggttcttcgcgttgcatcgaattaaaccacatgctccaccgcttgtgcgggcccccgtcaattcctttgagtttcactcttgcgagcgtactccccaggcgggacacttaacgcgttagctccagcactgaacggatcaaatcgtccagcacttagtgtccatcgtttacagctaggactactggggtatctaatcccattcgctcccctagctttcgtctctcagtgtcagtatcggcccagcagagtgctttcgccttgggcgttctttccgatatctacgcatttcaccgctccaccggaaattccctctgcctctaccggactccagcttagtagtttctgctgcctgtctagggttaagccctagtttttaacagcagactgaaaaagccacctacagacgctttacgcccaatcattccggataacgcttgcatcctctgtcttaccgcggctgctggcacagagttagccgatgcttattcttcagataccgtcatgatttcgtctctgaaaaaaggagtttacgacccgtaggccttctacctccacgcggcattgctccgtcaggctttcgcccattgcggaaaattccccactgctgcctcccgtaggagtctgggccgtgtctcagtcccagtgtggctgatcatcctctcagatcagctactgatcgttgccttggtaagcgattacctcaccaactagctaatcagacgcaagtctctcctagggcggattcctccttttactcct
|
||||
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_008099_358.align.fasta
Normal file
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_008099_358.align.fasta
Normal file
@ -0,0 +1,27 @@
|
||||
>RRNA16S_NC_008099_358 count=1; cluster_weight=1; cluster=RRNA16S_NC_008099_358; cluster_score=1.000000; cluster_center=True;
|
||||
AAAGGAGGTATTCCAATCCACACCTTCCAGTACGGATACCTTGTTACGACTTCACCATAG
|
||||
TTACTAGTTACACCGTAGGCGCTTTCTTCCAAAAGGTTAGATCCACGACTTCGGGCGGAA
|
||||
CCAACTTCCATGGTGTGACGGGCGGTGTGTACAAGGCTCGGGAACGTATTCACCGCTGTA
|
||||
TTGCTGACCAGCGATTACTAGCAATTCCGGCTTCATACAGGCGAGTTGCAGCCTGCAATC
|
||||
CGAACTAAGACTGGGTTTTTGAGGTTGGCTTCTTCTCGCGAAGTTGCATCCCATTGTCCC
|
||||
AGCCATTGTAGCACGTGTGTAGCCCAAGATGTAAGGGGCATGCTGATTTGACGTCATCCT
|
||||
CACCGTCCTCCGGCTTATCACCGGCAGTCTCGCTAGTTTCCCAAATGGCAACTAGTCGAT
|
||||
AAGGGTTGCGCTCGTTGCAGGACTTAACCTAACACCTCACGGCACGAGCTGACGACAACC
|
||||
ATGCACCACCTGTGTTCACGTTGCTTAATGCCGGACTCAGTCCAGCAGCAAAAGAGTCAC
|
||||
TTTCGCGACTCGGCGTGACATGTCAAACCTTGGTAAGGTTCTTCGCGTATCATCGAATTA
|
||||
AACCACATGCTCCACTGCTTGTGCGAGCCCCCGTCAATTCCTTTGAGTTTCACCCTTGCG
|
||||
AGCATACTCCCCAGGCGGGATACTTAACGCGTTAGCTACAATACTGAATGTTTTGAATCA
|
||||
CCCAATACTTAGTATCCATCGTTTACAGCTAGAACTACTATGGTATCTAATCATATTCGC
|
||||
TACTCTAGCTTTCGTCTCTCAGCGTCAGTTTCGGCCCAGTAGAGTGCTTTCGCCGTTGGT
|
||||
GTTCCTCCCAATCTCTACACATTTCACCGTTACACTGGGAATTCCCTCTACCTCTACCGT
|
||||
ACTCAAGTTTTCTAGTTTCCGCTGCCGACCCAGGGTTAAGCCCTAGTCTTTGACACCAGA
|
||||
CTTGAAAAACCGCCTACAGACTCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCCC
|
||||
CGTATTACCGCGACTGCTGGCACGGAGTTAGTCGATGCTTATTCCTCAAATAATGTCAGT
|
||||
ATTCATCCTTGAGAAAAGAAGTTTACAACCCACGGGCCGTCATCCTTCACGCGGTATTGC
|
||||
TCCGTCAGGCTTTCACCCATTGCGGAAAATTCCTCACTGCTGCCTCCCGTAGGAGTCTGG
|
||||
GCCGTGTCTCAGTCCCAGTGTGGCTGATCGTCCTCTCAGACCAGCTACTGATCGTCGCCT
|
||||
TGGTAAGCCATTACCTCACCAACTAGCTAATCAGCCGCAAGCCCGTCTTTAGGCCCCTGA
|
||||
AAGGGTTTCACTCCTCAGCATATGGAGTATTAGCAACCGTTTCCAGTTGTTATCCTCCTC
|
||||
CTAAAGGTAGGTTCTTACGTGTTACTCACCCGTCCGGCGCTGGCTAGACTGTACAAGTAC
|
||||
AGTTTCGCTCGCTTGCCTTGCATGTGTTAAGCATACCGCCAGCGTTCATCCTGAGCCAGG
|
||||
ATCAAACTCTCCATGATAT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008099_358.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008099_358.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_008099_358 count=1; cluster_weight=1; cluster=RRNA16S_NC_008099_358; cluster_score=1.000000; cluster_center=True;
|
||||
aaaggaggtattccaatccacaccttccagtacggataccttgttacgacttcaccatagttactagttacaccgtaggcgctttcttccaaaaggttagatccacgacttcgggcggaaccaacttccatggtgtgacgggcggtgtgtacaaggctcgggaacgtattcaccgctgtattgctgaccagcgattactagcaattccggcttcatacaggcgagttgcagcctgcaatccgaactaagactgggtttttgaggttggcttcttctcgcgaagttgcatcccattgtcccagccattgtagcacgtgtgtagcccaagatgtaaggggcatgctgatttgacgtcatcctcaccgtcctccggcttatcaccggcagtctcgctagtttcccaaatggcaactagtcgataagggttgcgctcgttgcaggacttaacctaacacctcacggcacgagctgacgacaaccatgcaccacctgtgttcacgttgcttaatgccggactcagtccagcagcaaaagagtcactttcgcgactcggcgtgacatgtcaaaccttggtaaggttcttcgcgtatcatcgaattaaaccacatgctccactgcttgtgcgagcccccgtcaattcctttgagtttcacccttgcgagcatactccccaggcgggatacttaacgcgttagctacaatactgaatgttttgaatcacccaatacttagtatccatcgtttacagctagaactactatggtatctaatcatattcgctactctagctttcgtctctcagcgtcagtttcggcccagtagagtgctttcgccgttggtgttcctcccaatctctacacatttcaccgttacactgggaattccctctacctctaccgtactcaagttttctagtttccgctgccgacccagggttaagccctagtctttgacaccagacttgaaaaaccgcctacagactctttacgcccaatcattccggataacgcttgcatcccccgtattaccgcgactgctggcacggagttagtcgatgcttattcctcaaataatgtcagtattcatccttgagaaaagaagtttacaacccacgggccgtcatccttcacgcggtattgctccgtcaggctttcacccattgcggaaaattcctcactgctgcctcccgtaggagtctgggccgtgtctcagtcccagtgtggctgatcgtcctctcagaccagctactgatcgtcgccttggtaagccattacctcaccaactagctaatcagccgcaagcccgtctttaggcccctgaaagggtttcactcctcagcatatggagtattagcaaccgtttccagttgttatcctcctcctaaaggtaggttcttacgtgttactcacccgtccggcgctggctagactgtacaagtacagtttcgctcgcttgccttgcatgtgttaagcataccgccagcgttcatcctgagccaggatcaaactctccatgatat
|
||||
@ -0,0 +1,3 @@
|
||||
>RRNA16S_NC_008100_368 count=1; cluster_weight=1; cluster=RRNA16S_NC_008100_368; cluster_score=1.000000; cluster_center=True;
|
||||
AATAAAATTAGTGTCTTAATAATATAGAAAGACCTTAAATCCATACCGAACTAAGAAGTG
|
||||
ATACTATATTAAAACAAAAATACTAAGTGGGCAGCTGCTTGGAAAGATAGTTAGATGCT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008100_368.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008100_368.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_008100_368 count=1; cluster_weight=1; cluster=RRNA16S_NC_008100_368; cluster_score=1.000000; cluster_center=True;
|
||||
aataaaattagtgtcttaataatatagaaagaccttaaatccataccgaactaagaagtgatactatattaaaacaaaaatactaagtgggcagctgcttggaaagatagttagatgct
|
||||
@ -0,0 +1,3 @@
|
||||
>RRNA16S_NC_008101_97 count=1; cluster_weight=1; cluster=RRNA16S_NC_008101_97; cluster_score=1.000000; cluster_center=True;
|
||||
GATATGTTAAAACAAGAAGTTATTAAATATTTTGAAACAATGGATTTATTTAATCCAATT
|
||||
TATATGATGGCTTTTTCTGGAGCTCGAGGAAATATGTCCCAAGTACGTCAATTAGTTGG
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008101_97.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008101_97.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_008101_97 count=1; cluster_weight=1; cluster=RRNA16S_NC_008101_97; cluster_score=1.000000; cluster_center=True;
|
||||
gatatgttaaaacaagaagttattaaatattttgaaacaatggatttatttaatccaatttatatgatggctttttctggagctcgaggaaatatgtcccaagtacgtcaattagttgg
|
||||
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_008114_120.align.fasta
Normal file
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_008114_120.align.fasta
Normal file
@ -0,0 +1,27 @@
|
||||
>RRNA16S_NC_008114_120 count=1; cluster_weight=1; cluster=RRNA16S_NC_008114_120; cluster_score=1.000000; cluster_center=True;
|
||||
GTTTGTCTAGCCATATCCGACATTATTATACCTAAAAAAAAACGTAAATCAAAGTTTTTT
|
||||
AATAGAAAAACGTTTTATAGAAGCCAAAAAATTCCATTTTTTCCTTAATAATTTTGATTT
|
||||
CGTTTTTGAACTTCTTATAATTTTTTATTTTGTAAAGTTTCCGCTAAAAATTTCTTTTTA
|
||||
AAATTCATAAAAACTTAGCTATAAGTTTCACAGATATTTTTTTTCTTAGTTTAAAATCCA
|
||||
TTAAAAAATTACGATATAATCTAAAATTGACAACTTCAACGCGCTGCTTTTACCGTGTCT
|
||||
TCCCTTTTGAGCAGCTTTGAAGTTTTGCTCCTTGCTTCGCTACTACTCAAAGGGGAATTC
|
||||
TTTTGGAACAAATAAAGCCGAATACAGCAAGGGATAGCAAAAAAAACTGCGGTTTTGAAT
|
||||
TGAATAAAGAAGGAATTAACTTTCGGTATTCAAATCTTTTGTTATAGCTTTTTCTAAATT
|
||||
TAATTTTTTTGACGCTCTACTTGCTATAAAATAGGCTTGGATTGCTTGTTTTAAGGCTTT
|
||||
TTTTTTCCAAACTGTTTTTCTTAAATTTGTTTTTGATTTAGATGTTCGTTTTTTTGGAAC
|
||||
TGCCATTTTCTTTCTCCTTTGTTAAGAACACTTTTTAGACTTATTTTTCATCTTTTTCAT
|
||||
TTTAAAATGAAAGTCGGGCATTCTTTGTGATAGTATTTATATAATAAAAAGAGTGGTTCA
|
||||
ACAATAAAAATGAACCAACTTTTTTATATGAAAAACAATGTTTTCAAATTTGATGGTAAA
|
||||
ATTTTTTTTTAAACTTTTAGATTTTATATCATTAAAAAGGGGAACAAACACTACTTTAAA
|
||||
TGGTTTCCTCTTTTCTTCAATCATTGTGTTTTGCTTCAAAGCCGGGGGAAAAATTTAGGT
|
||||
TTCGATTTTGAAGTACCTTTCAAAAAACGGAGTTAATTTTATTTTTTTTATGAAAAAATC
|
||||
TTATTTTTAAAAACTTTTTTCATAATTTTTTTTATGAAAAAAGTTTCCGTAAGATTTAAA
|
||||
AGTTGTTTTTTTTTATTTCTTCGAATATTATAAATAAATAAAAAAAAATTAGCAAATACT
|
||||
TTTAATCGTTATTAGTTTCTTTTATTTTTTGTTTTGTAAAATCGGTAGTTGTAAAAATTA
|
||||
CAGGCTTTTTTTTAGATTAGGAGTAATATTTTTTTAAAACGAATTAGTAAAAAAAAAAAA
|
||||
CAATACTTTATAATAGGAAAAAACTGTTGCGAACAGGGGGAATCGAACCCCCGACTTCGC
|
||||
CTTGGCAAGGCGACATTTTACCCCTAAACTATGTTCGCTTTTATGGACTTTACTTATTTT
|
||||
AATGAAAGCATAAAACTCTGTCAACTGGAAGTTAATGCACGATTCTTTAAATTAATTTTA
|
||||
GAACGAATTAAACTCTTTTAACATATTATCATATTATTTCGCTCTCTTTTTTTGAAACGA
|
||||
TTCTAGTTTTTAATTTTTTAGTTTCTTATTTTAAAGAAACAAATTTTCTTTTTGACGGAA
|
||||
TAATTTTAAAT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008114_120.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008114_120.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_008114_120 count=1; cluster_weight=1; cluster=RRNA16S_NC_008114_120; cluster_score=1.000000; cluster_center=True;
|
||||
gtttgtctagccatatccgacattattatacctaaaaaaaaacgtaaatcaaagttttttaatagaaaaacgttttatagaagccaaaaaattccattttttccttaataattttgatttcgtttttgaacttcttataattttttattttgtaaagtttccgctaaaaatttctttttaaaattcataaaaacttagctataagtttcacagatattttttttcttagtttaaaatccattaaaaaattacgatataatctaaaattgacaacttcaacgcgctgcttttaccgtgtcttcccttttgagcagctttgaagttttgctccttgcttcgctactactcaaaggggaattcttttggaacaaataaagccgaatacagcaagggatagcaaaaaaaactgcggttttgaattgaataaagaaggaattaactttcggtattcaaatcttttgttatagctttttctaaatttaatttttttgacgctctacttgctataaaataggcttggattgcttgttttaaggctttttttttccaaactgtttttcttaaatttgtttttgatttagatgttcgtttttttggaactgccattttctttctcctttgttaagaacactttttagacttatttttcatctttttcattttaaaatgaaagtcgggcattctttgtgatagtatttatataataaaaagagtggttcaacaataaaaatgaaccaacttttttatatgaaaaacaatgttttcaaatttgatggtaaaatttttttttaaacttttagattttatatcattaaaaaggggaacaaacactactttaaatggtttcctcttttcttcaatcattgtgttttgcttcaaagccgggggaaaaatttaggtttcgattttgaagtacctttcaaaaaacggagttaattttattttttttatgaaaaaatcttatttttaaaaacttttttcataattttttttatgaaaaaagtttccgtaagatttaaaagttgtttttttttatttcttcgaatattataaataaataaaaaaaaattagcaaatacttttaatcgttattagtttcttttattttttgttttgtaaaatcggtagttgtaaaaattacaggcttttttttagattaggagtaatatttttttaaaacgaattagtaaaaaaaaaaaacaatactttataataggaaaaaactgttgcgaacagggggaatcgaacccccgacttcgccttggcaaggcgacattttacccctaaactatgttcgcttttatggactttacttattttaatgaaagcataaaactctgtcaactggaagttaatgcacgattctttaaattaattttagaacgaattaaactcttttaacatattatcatattatttcgctctctttttttgaaacgattctagtttttaattttttagtttcttattttaaagaaacaaattttctttttgacggaataattttaaat
|
||||
52
data/rrna/RRNA_16S/00001_RRNA16S_NC_008116_114.align.fasta
Normal file
52
data/rrna/RRNA_16S/00001_RRNA16S_NC_008116_114.align.fasta
Normal file
@ -0,0 +1,52 @@
|
||||
>RRNA16S_NC_008116_114 count=1; cluster_weight=1; cluster=RRNA16S_NC_008116_114; cluster_score=1.000000; cluster_center=True;
|
||||
GTTCAAATAATTAAGGGCTTATGGTGGATACCTAGGCACCCAGAGACGAAGAAGGGCGTA
|
||||
GCAAGCGACGAAATGCTTCGGGAAGCTGAGAACAAGCATTGATCCGGAGATGCCCGAATA
|
||||
GGGGAACCTATTTGACTGCCTGCTGAATTGATAGGGAGGCAAGAGACAACCTGGCGAACT
|
||||
GAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCTGAGTAGTGGCGAGC
|
||||
GAAATGGGAACAGCCTAAACCGGCTTCCGTTTTGGGAGTCGGGGTTGTGGGAGAGCGACA
|
||||
GTTGTTAAGAGTTACTAGACGAAGCAGCTGAGTCCTGCACCTGAGATGGTGAGAGTCCAG
|
||||
TAGTTGAAAGTATCTCTAACAAACGCTAATTCCCGAGTAGCATGGGGCACGTGAAATCCC
|
||||
GTGTGAATCAGCGAGGACCACCTCGTAAGGCTAAATACTCCTGGGTGACCGATAGTGAAG
|
||||
TAGTACCGTGAGGGAAAGGTGAAAAGAACCCCCATCGGGGAGTGAAATAGAACATGAAAC
|
||||
CGTAAGCCTCCAAGCAGTGGGAGGAGAATGGAATCTCTGACCGCGTGCCTGTTGAAGAAT
|
||||
GAGCCGGCGACTTATAGGCAGTGGCCTGGTTAAGGCGTGAAGCCGGAGCCGTAGCGAAAG
|
||||
CGAGTCTTTCTAGGGCGAATGTCACTGCTTATGGACCCGAACCCGGGTGATCTAACCATG
|
||||
GCCAGGGTGAAGCTTGGGTGAAGCCAAGTGGAGGTCCGAACCGACTGATGTTGAAAAATC
|
||||
AGCGGATGAGCTGTGGTTAGGGGTGAAATGCCACTCGAACTCGGAGCTAGCTGGTTCTCC
|
||||
CCGAAATGCGTTGAGGCGCAGCGGTTGACTGGACTGCCTAGGGGTAAAGCACTGTTTCGG
|
||||
TGCGGGCTGCGAAAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGGCACGACATCGG
|
||||
TCAGCCAGTAAGACGGTGGGGGATAAGCTTCATCGTCAAGAGGGAAACAGCCCAGACCAC
|
||||
CAGCTAAGGCCCCTAAATGACCGCTCAGTGGCAAAGGAGGTGAGAGTGCAAAGACAGCCA
|
||||
GGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCG
|
||||
CTCTTGCGCCGAAGATGAACGGGACTAAGCGGTCTGCCGAAGCTGTGGGATGTCCATTAG
|
||||
GGCATCGGTAGGGGAGCGTTCCGCAAACGGGAGAAGCATCAGTGTAAACAGGTGTGGACG
|
||||
AAGCGGAAGTGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCG
|
||||
AAAACCCAAGGGTTCCTCCGCAAGGCTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCA
|
||||
TGCCGAACGGCGCAGTCGATGGACAACAGGTCAAGATTCCTGTACTACCCCTTGTCGGCA
|
||||
ATAAGAGGGACGGAGGAGGCTAAGCTAGCCGAATAATGGTCATCGGTTCAAGGGCCTGAA
|
||||
AACCTGAGTACTAGGCACCTACGGGGCCGAAGTAGCTGATGCCACGCTCCCAAGAAAAGC
|
||||
TCTTACGCCAATACTGACACGAAGTGTGTCTGAAAAAGCAAAGATTTGATTTCCTTTAAA
|
||||
AGAAAAAAATCGTTGTTTTTTCAACAAAACAAAAATAAGACAAGTGCCCGAAAGGGTCCC
|
||||
ATATATATGGGAGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTTGAGAATACCTA
|
||||
GGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAGATGGCCCCGTAACTTCGGGAGAA
|
||||
GGGGTGCCCCTCTGGGGCCGCAGTGACCAGGCCCAGGCGACTGTTTACCAAAAACACAGG
|
||||
TCTCCGCAAAGTCGCAAGACGACGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTA
|
||||
AGGAAGTCGGTGACTCGATACGAGGAAGCTGGCGACCGAAGCCCCGGTGAACGGCGGCCG
|
||||
TAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAA
|
||||
AGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGGCTCGGTGAAATAGACTTGTCTGTGA
|
||||
AGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTTACTGTTCCCTGGGA
|
||||
TGGGGTTTGGGCCCTTCTTGCGCAGTCTAGGTGGGAGGCGAAGACGGCGTCCTTCCGGGG
|
||||
ACGCTCGAGCCGAAGATGAGAGACCACCCTAGAAGGGCTAGGATTCTAACCTTATGCCTA
|
||||
GAAGAAGGCTAGGGGACAGTCCCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAG
|
||||
GGTAACGGAGGCGTGCAAAGGTTTCCTCAGGCTGGACGGAAATCAGCCTTCGAGTGCAAA
|
||||
GGCAGAAGGGAGCTTGACTGCAAGACCTACCCGTCGAGCAGGGACGAAAGTCGGCCTTAG
|
||||
TGATCCGACGGTTCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGAT
|
||||
AACAGGCTGATCTTCCCCAAGAGTTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGG
|
||||
CTCTTCGCCACCTGGCGCGGTAGTACGTGCCAAGGGTTGGGCTGTTCGCCCATTAAAGCG
|
||||
GTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTTGGTCCATATCCGGTGCAGGCGTT
|
||||
AGAGCATTGAGAGGATCTCTCCCTAGTACGAGAGGACCGGGAGGGACGCACCGCTGGTGT
|
||||
GCCAGTTATCGTGCCAACGGTAAACGCTGGGTAGCCAAGTGCGGAGCGGATAACTGCTGA
|
||||
AAGCATCTAAGTAGGAAGCCCACCTCAAGATGAGTGCTCTCCCCACGTACATACCCTATT
|
||||
ATGGGAGTACGGAACGGGAAATCAATCCCGTCAAATGAGGTCACGGCAAGACCAGCCGTT
|
||||
TGTTACAATAGGTGCCAGGTAGAAGTCCCGTAAGGGATGTAGCTGAGGCATCCTAACAGA
|
||||
CCGAGAGATTTGAAC
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008116_114.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008116_114.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_008116_114 count=1; cluster_weight=1; cluster=RRNA16S_NC_008116_114; cluster_score=1.000000; cluster_center=True;
|
||||
gttcaaataattaagggcttatggtggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcgggaagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccggcttccgttttgggagtcggggttgtgggagagcgacagttgttaagagttactagacgaagcagctgagtcctgcacctgagatggtgagagtccagtagttgaaagtatctctaacaaacgctaattcccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtaagcctccaagcagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaaggcgtgaagccggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggcacgacatcggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccattagggcatcggtaggggagcgttccgcaaacgggagaagcatcagtgtaaacaggtgtggacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacggcgcagtcgatggacaacaggtcaagattcctgtactaccccttgtcggcaataagagggacggaggaggctaagctagccgaataatggtcatcggttcaagggcctgaaaacctgagtactaggcacctacggggccgaagtagctgatgccacgctcccaagaaaagctcttacgccaatactgacacgaagtgtgtctgaaaaagcaaagatttgatttcctttaaaagaaaaaaatcgttgttttttcaacaaaacaaaaataagacaagtgcccgaaagggtcccatatatatgggaggtacctgtacccgaaaccgacacaggtgggtaggttgagaatacctaggggcgcgagacaactctctctaaggaactcggcaagatggccccgtaacttcgggagaaggggtgcccctctggggccgcagtgaccaggcccaggcgactgtttaccaaaaacacaggtctccgcaaagtcgcaagacgacgtatgggggctgacgcctgcccagtgccggaaggttaaggaagtcggtgactcgatacgaggaagctggcgaccgaagccccggtgaacggcggccgtaactataacggtcctaaggtagcgaaattccttgtcgggtaagttccgacccgcacgaaaggcgtaacgatctgggcactgtctcggagagaggctcggtgaaatagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccctgggatggggtttgggcccttcttgcgcagtctaggtgggaggcgaagacggcgtccttccggggacgctcgagccgaagatgagagaccaccctagaagggctaggattctaaccttatgcctagaagaaggctaggggacagtcccaggtagacagtttctatggggcgtaggcctcccaaagggtaacggaggcgtgcaaaggtttcctcaggctggacggaaatcagccttcgagtgcaaaggcagaagggagcttgactgcaagacctacccgtcgagcagggacgaaagtcggccttagtgatccgacggttccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctcttcgccacctggcgcggtagtacgtgccaagggttgggctgttcgcccattaaagcggtacgtgagctgggttcagaacgtcgtgagacagtttggtccatatccggtgcaggcgttagagcattgagaggatctctccctagtacgagaggaccgggagggacgcaccgctggtgtgccagttatcgtgccaacggtaaacgctgggtagccaagtgcggagcggataactgctgaaagcatctaagtaggaagcccacctcaagatgagtgctctccccacgtacataccctattatgggagtacggaacgggaaatcaatcccgtcaaatgaggtcacggcaagaccagccgtttgttacaataggtgccaggtagaagtcccgtaagggatgtagctgaggcatcctaacagaccgagagatttgaac
|
||||
@ -0,0 +1,4 @@
|
||||
>RRNA16S_NC_008117_369 count=1; cluster_weight=1; cluster=RRNA16S_NC_008117_369; cluster_score=1.000000; cluster_center=True;
|
||||
AATGCTGGTACCTTAAGCGCAGAGGCAACACGCTAACCCATCCCGAACTTGGCGGTGAAA
|
||||
CTCTGCTGCAGTGACAATACTGCAGGAGAAGTCCTGTGGGAAGATAGCTCGGCGCCAGCT
|
||||
TA
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008117_369.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008117_369.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_008117_369 count=1; cluster_weight=1; cluster=RRNA16S_NC_008117_369; cluster_score=1.000000; cluster_center=True;
|
||||
aatgctggtaccttaagcgcagaggcaacacgctaacccatcccgaacttggcggtgaaactctgctgcagtgacaatactgcaggagaagtcctgtgggaagatagctcggcgccagctta
|
||||
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_008155_67.align.fasta
Normal file
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_008155_67.align.fasta
Normal file
@ -0,0 +1,26 @@
|
||||
>RRNA16S_NC_008155_67 count=1; cluster_weight=1; cluster=RRNA16S_NC_008155_67; cluster_score=1.000000; cluster_center=True;
|
||||
CGCCCCTGATAATTGCGTCGTTGTGCCTGGGCTGTGAGGGCTCTCAGCCACATGGATAGT
|
||||
TCAATGTGCTCATCAGCGCCTGACCCGAAGATGTGGATCATCCAAGGCACATTAGCATGG
|
||||
CGTACTCCTCCTGTTTGAATCGGAGTTTGAAACCAAACAAACTTCTCCTCAGGAGGATAG
|
||||
ATGGGGCGATTCAGGTGAGATCCCATGTAGATCTAACTTTCTATTCACTCGTGGGATCCG
|
||||
GGCGGTCCGGGGGGGGCACTACGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCA
|
||||
GTGTATGGAGAGCTATCTCTCGAGCACAGGTTGAGGTTCGTCCTCAATGGGAAAATGGAG
|
||||
CACCTAACAACGCATCTTCACAGACCAAGAACTACGAGATCACCCTTTCATTCTGGGGTG
|
||||
ACGGAGGGATCGTACCATTCGAGCCTTTTTTTCATGCTTTTCCCGGCGGTCTGGAGAAAG
|
||||
CAGCAATCAATAGGACTTCCCTAATCCTCCCTTCCTGAAAGGAAGAACGTGAAATTCTTT
|
||||
TTCCTTTCCGCAGGGACCAGGAGGTTGGATCTAGCCATAAGAGGAATGCTTGGTATAAAT
|
||||
AAGCCACTTCTTGGTCTTCGACTCCCTAAGTCACTACGAGCGCCCTCGATCAGTGCAATG
|
||||
GGATGTGGCTATTTATCTATCTCTTGACTCGAAATGGGAGCAGAGCAGGTTTGAAAAAGG
|
||||
ATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTCTCTTAACGCCTTCCTTTTTCTGCCCA
|
||||
TCGGAGTTATTTCCCAAGGACTTGCCATGGTAAGGGGGAGAAGGGGAAGAAGCACACTTG
|
||||
AAGAGCGCAGTACAACGGAGAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAA
|
||||
AAGGAGTCTATTGATTCTCTCCCAATTGGTTGGATCGTAGGGGCGATGATTTACTTCACG
|
||||
GGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTGCGCCAGGGAAAAGAATAGAAGA
|
||||
AGCATCTGACTCTTTCATGCATACTCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAG
|
||||
AGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGCTGTCTAATTGTCCAGGCG
|
||||
GTAATGGTAGTATCTTGTACCTGAACCGGTGGCTCACTTTTTCTAAGTAATGGGGAAGAG
|
||||
GACTGAAACATGCCACTGAAAGACTCTACTGAGACAAAAAGATGGGCTGTCAAAAAGGTA
|
||||
GAGGAGGTAGGATGGGCAGTTGGTCAGATCTAGTATGGATCGTACATGGACGATAGTTGG
|
||||
AGTCGGCGGCTCTCCTAGGCTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGG
|
||||
CCCTTGCGAATAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGTGGCAAAA
|
||||
GGAAGGAAAATCCATGGACCGACCCCATTATCTCCACCCCGTAGGAACTAC
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008155_67.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008155_67.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_008155_67 count=1; cluster_weight=1; cluster=RRNA16S_NC_008155_67; cluster_score=1.000000; cluster_center=True;
|
||||
cgcccctgataattgcgtcgttgtgcctgggctgtgagggctctcagccacatggatagttcaatgtgctcatcagcgcctgacccgaagatgtggatcatccaaggcacattagcatggcgtactcctcctgtttgaatcggagtttgaaaccaaacaaacttctcctcaggaggatagatggggcgattcaggtgagatcccatgtagatctaactttctattcactcgtgggatccgggcggtccggggggggcactacggctcctctcttctcgagaatccatacatcccttatcagtgtatggagagctatctctcgagcacaggttgaggttcgtcctcaatgggaaaatggagcacctaacaacgcatcttcacagaccaagaactacgagatcaccctttcattctggggtgacggagggatcgtaccattcgagcctttttttcatgcttttcccggcggtctggagaaagcagcaatcaataggacttccctaatcctcccttcctgaaaggaagaacgtgaaattctttttcctttccgcagggaccaggaggttggatctagccataagaggaatgcttggtataaataagccacttcttggtcttcgactccctaagtcactacgagcgccctcgatcagtgcaatgggatgtggctatttatctatctcttgactcgaaatgggagcagagcaggtttgaaaaaggatcttagagtgtctagggttgggccaggagggtctcttaacgccttcctttttctgcccatcggagttatttcccaaggacttgccatggtaagggggagaaggggaagaagcacacttgaagagcgcagtacaacggagagttgtatgctgcgttcgggaaggatgaatcgctcccgaaaaggagtctattgattctctcccaattggttggatcgtaggggcgatgatttacttcacgggcgaggtctctggttcaagtccaggatggcccagctgcgccagggaaaagaatagaagaagcatctgactctttcatgcatactccacttggctcggggggatatagctcagttggtagagctccgctcttgcaattgggtcgttgcgattacgggttggctgtctaattgtccaggcggtaatggtagtatcttgtacctgaaccggtggctcactttttctaagtaatggggaagaggactgaaacatgccactgaaagactctactgagacaaaaagatgggctgtcaaaaaggtagaggaggtaggatgggcagttggtcagatctagtatggatcgtacatggacgatagttggagtcggcggctctcctaggcttccctcatctgggatccctggggaagaggatcaagttggcccttgcgaatagcttgatgcactatctcccttcaaccctttgagcgaaatgtggcaaaaggaaggaaaatccatggaccgaccccattatctccaccccgtaggaactac
|
||||
3692
data/rrna/RRNA_16S/00001_RRNA16S_NC_008372_414.align.fasta
Normal file
3692
data/rrna/RRNA_16S/00001_RRNA16S_NC_008372_414.align.fasta
Normal file
File diff suppressed because it is too large
Load Diff
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008372_414.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008372_414.fasta
Normal file
File diff suppressed because one or more lines are too long
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_008454_329 count=1; cluster_weight=1; cluster=RRNA16S_NC_008454_329; cluster_score=1.000000; cluster_center=True;
|
||||
TGGAAACTACCAAGCTGGAGTACGGTAGGGGGAAAG
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008454_329.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008454_329.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_008454_329 count=1; cluster_weight=1; cluster=RRNA16S_NC_008454_329; cluster_score=1.000000; cluster_center=True;
|
||||
tggaaactaccaagctggagtacggtagggggaaag
|
||||
@ -0,0 +1,4 @@
|
||||
>RRNA16S_NC_008822_98 count=1; cluster_weight=1; cluster=RRNA16S_NC_008822_98; cluster_score=1.000000; cluster_center=True;
|
||||
GATCCTGGCATCGAGCTATTTTCCCGTAGAGTGGCCTCTAGAGTATCTTCACCGCTACAC
|
||||
TGTTTCACTACCAAGTTCGGGATGGATTGGTGTGGTTCCACTGCGCCTAAGACACCAGGA
|
||||
TA
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008822_98.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008822_98.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_008822_98 count=1; cluster_weight=1; cluster=RRNA16S_NC_008822_98; cluster_score=1.000000; cluster_center=True;
|
||||
gatcctggcatcgagctattttcccgtagagtggcctctagagtatcttcaccgctacactgtttcactaccaagttcgggatggattggtgtggttccactgcgcctaagacaccaggata
|
||||
@ -0,0 +1,4 @@
|
||||
>RRNA16S_NC_009681_350 count=1; cluster_weight=1; cluster=RRNA16S_NC_009681_350; cluster_score=1.000000; cluster_center=True;
|
||||
TTTTCTGGTGTGTTTACTGAAATAGAAACACCTCATACCATCCCGACCTGATCGGTGAAA
|
||||
CATTTCAGCGGCTATGATACTGCAAGCGGGGGCTTGTGGGAAAGCAGCCGCATGCCAGAA
|
||||
T
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_009681_350.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_009681_350.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_009681_350 count=1; cluster_weight=1; cluster=RRNA16S_NC_009681_350; cluster_score=1.000000; cluster_center=True;
|
||||
ttttctggtgtgtttactgaaatagaaacacctcataccatcccgacctgatcggtgaaacatttcagcggctatgatactgcaagcgggggcttgtgggaaagcagccgcatgccagaat
|
||||
2722
data/rrna/RRNA_16S/00001_RRNA16S_NC_011031_365.align.fasta
Normal file
2722
data/rrna/RRNA_16S/00001_RRNA16S_NC_011031_365.align.fasta
Normal file
File diff suppressed because it is too large
Load Diff
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_011031_365.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_011031_365.fasta
Normal file
File diff suppressed because one or more lines are too long
51
data/rrna/RRNA_16S/00001_RRNA16S_NC_012097_111.align.fasta
Normal file
51
data/rrna/RRNA_16S/00001_RRNA16S_NC_012097_111.align.fasta
Normal file
@ -0,0 +1,51 @@
|
||||
>RRNA16S_NC_012097_111 count=1; cluster_weight=1; cluster=RRNA16S_NC_012097_111; cluster_score=1.000000; cluster_center=True;
|
||||
GGTCAAATGATTAAGGGCATACGGCGGATACCTAGGCACCTAGAGACGATGAAAGGCGCA
|
||||
GTACCCGGCGATACGCCTTGGGGAGCCGGACACAGGCCATGATCCAAGGATTCCTGAATG
|
||||
GGACAACCCAAGTACTTCTCATTGAATTCATAGATGAGAAAGAGATAACCTAGTGAATTG
|
||||
AAACATCTTAGTAGCTAGAGGAAAAGAGAGCAAACGCGATTTCCTGAGTAGCGGCGAGCG
|
||||
AAACGGAACGAGCCTAAACCAAAACTATGTTTTGGGGTTGTGGGACAGAAACTAATATTA
|
||||
TAGTTTGACTTTGTTAGATGAAGCGATTGAATGTCGCGCCATAGATGGTGAAAGCCCAGT
|
||||
AATCAAAAACAAAACTCTATAACTTCTGATCCCGAGTAGCATGGGGCACGTGAAATCCCG
|
||||
TGTGAATCCGCGAGGACCACCTCGTAAGGCTAAATACTCCTAGGTGACCGATAGCGAATA
|
||||
GTACCGCGAGGGAACGGTGAAAGAGTACCCTAATCAGGGAGTGAAATAGAACATGAAACC
|
||||
GTATGCTTACAAGCAGTAGGAGGCATCATTTAAAATGCTAACTGCGTTCCTGTTGAAGAA
|
||||
TGAGCCGGCGACTTATGGTCAGTGGCAAGGTTAAAACGAATAGTTGGAGCCAAAGCGAAA
|
||||
GCGAGTCTGAAAGGGCGTCTGTCATTGGCTATAGACCCGAACCCGGGTGATCTAACCGCG
|
||||
GTCAGGATGAAACTTGGGTAAGACTAAGTGGAGGTCCGAACCGACCGATGTTGAAAAATC
|
||||
GGCGGATGAACTGTGGTTAGGGGTGAAATGCCAATCGAACTCGGAGCTAGCTGGTTCTCC
|
||||
CCGAAATGCGTTGAGGCGCAGCGGTTGATGATTAGGCTGTCTAGGGGTAGAGCACTGTCT
|
||||
CGGTGCGGGCTGCGAGAGCGGTACCAAATCGTAGCAAACTCCGAATACTAGAACAGAGCC
|
||||
ATCAGCCAGTGAGACTGTGGGGGATAAGCTCCATTGTCGAGAGGGAAACAGCCCAGACCA
|
||||
TCGGCTAAGGCCCCTAAATGATTACTAAGTGATAAAGGAGGTGAGAGTGCCCAGACAACC
|
||||
AGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACTGGTCAAGC
|
||||
GCTCTTGCGCCGAAAATGAACGGGACTAAGTAATCTGCCGAAGCTGTGGGATAACAATTT
|
||||
GTTATCGGTAGGGGAGCGTTCCGAAAAGGGCGAAGTTTAGGCGTGAGCCTTGATGGACTT
|
||||
TTCGGAAGTGAGAATGTCGGCTTGAGTAACGAAAACAGGGGTGATGAATCCCCTGCCCCG
|
||||
AAAGCCCAAGGGTTCCTCCACTAGGCTCGTCCAGGGAGGGTCAGTCAGGACCTAAGACGA
|
||||
GGCCAAACGGCGCAGTCGATGGAAAACAGGCGAACATTCCTGTACTACGTTCCATAATCT
|
||||
GAAACAATTTTTGTTGAAGCACGTACCGGAGGACGGAGAGGGTTATGTTAAACGGTGGGC
|
||||
ACGTTCTCTAACTCGCAGTGATTACAGAGAGGAAAAGAAAACTCTTTGAGCGAAGAGATT
|
||||
AGGGCTTTACTTTTTACTTGTTATTTCAAAATAACATTGTGCCACCAATGATAAAAAGTA
|
||||
AAGATTAACAGATACCGAGATCCCGAGAAAAGTCCGTACTATGTGAAATGAAGAACGTAC
|
||||
CTGTACCCCAAACCGACACAGGTGGGCAAGTAGAGAATACTAAGGGGCGCGAGATAACTC
|
||||
TCTCTAAGGAACTCGGCAAAATGGCCCCGTAACTTCGGGAGAAGGGGTGCCGGATTATAT
|
||||
CCGGCCGCAGCGACCAGGCCCAAGCGACTGTTTACCAAAAACACAGGTCTCCGCTAAATC
|
||||
GAAAGATGACGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAAGGAAGCTGGTTA
|
||||
GGATTACCGAAGCTAGCGACTGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCT
|
||||
AAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAAAGGCGTAACGATTTGG
|
||||
GCACTGTCTCGGAGAGAGGCTCGGTGAAATAGAATTGTCTGTGAAGATGCGGACTACCTG
|
||||
CACTTGGACAGAAAGACCCTATGAAGCTTTACTGTAGCTTGAGATTGGGCTCGGGCTTTT
|
||||
CTTGCGCAGCTTAGGTGGGAGGCTTAGATCCTATTCTTTTGGGAATAGAGGAGCCGTCAG
|
||||
TGAGATACCACTCTAGGAAGGCTAGAGTCCTAAGGGTGCTCCCTTTGCGGGACACCTAAC
|
||||
AGTCTCAGGTAGGCAGTTTGACTGGGGCGGTCGCCTCCTAAAAGGTAACGGAGGCGTGCA
|
||||
AAGGTTCCCTCAGGCTGGACGGAAATCAGTCGTAGAGTATAAAGGCAGAAGGGAGCTTGA
|
||||
CTGCGAGACTGACACGTCAAGCAGGGGCGAAAGCCGGCCTTAGTGATCCGACGGTTCCGT
|
||||
GTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTGATCTCCCC
|
||||
CAAGAGTTCACATCGACGGGGAGGTTTGGCACCTCGATGTCGGCTCATCGCAGCCTGGGG
|
||||
CGGTAGTGCGTCCCAAGGGTTGGGCTGTTCGCCCATGAAAGCGGTACGTGAGCTGGGTTC
|
||||
AGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCGCTAGAGCATTGAGAGGATC
|
||||
CCCCCCTAGTACGAGAGGACCGGGGGGTATGCACCGCTGGTGTACCAGTTCTTTCCCTAC
|
||||
GATCTGTAGGTAAGGATACGCTGGGTAGCTATGTGTGGAGTGGATAACTGCTGAAGGCAT
|
||||
CTAAGTAGGAAGCCCACCTCAAGATGAGTGCTCTTTGAGGCCACGGCAAGACTAGCCGGT
|
||||
AATAAGGATTTTCAGTTATGAAATCTTTCCAGGCTCTAAGTGGAAGCTTTGTAAAAAGTG
|
||||
CAGCTGAGGAGTTCTGATAGGCCAAAAGTTTGACCAT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_012097_111.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_012097_111.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_012097_111 count=1; cluster_weight=1; cluster=RRNA16S_NC_012097_111; cluster_score=1.000000; cluster_center=True;
|
||||
ggtcaaatgattaagggcatacggcggatacctaggcacctagagacgatgaaaggcgcagtacccggcgatacgccttggggagccggacacaggccatgatccaaggattcctgaatgggacaacccaagtacttctcattgaattcatagatgagaaagagataacctagtgaattgaaacatcttagtagctagaggaaaagagagcaaacgcgatttcctgagtagcggcgagcgaaacggaacgagcctaaaccaaaactatgttttggggttgtgggacagaaactaatattatagtttgactttgttagatgaagcgattgaatgtcgcgccatagatggtgaaagcccagtaatcaaaaacaaaactctataacttctgatcccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggctaaatactcctaggtgaccgatagcgaatagtaccgcgagggaacggtgaaagagtaccctaatcagggagtgaaatagaacatgaaaccgtatgcttacaagcagtaggaggcatcatttaaaatgctaactgcgttcctgttgaagaatgagccggcgacttatggtcagtggcaaggttaaaacgaatagttggagccaaagcgaaagcgagtctgaaagggcgtctgtcattggctatagacccgaacccgggtgatctaaccgcggtcaggatgaaacttgggtaagactaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgaactgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgattaggctgtctaggggtagagcactgtctcggtgcgggctgcgagagcggtaccaaatcgtagcaaactccgaatactagaacagagccatcagccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcggctaaggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgttatcggtaggggagcgttccgaaaagggcgaagtttaggcgtgagccttgatggacttttcggaagtgagaatgtcggcttgagtaacgaaaacaggggtgatgaatcccctgccccgaaagcccaagggttcctccactaggctcgtccagggagggtcagtcaggacctaagacgaggccaaacggcgcagtcgatggaaaacaggcgaacattcctgtactacgttccataatctgaaacaatttttgttgaagcacgtaccggaggacggagagggttatgttaaacggtgggcacgttctctaactcgcagtgattacagagaggaaaagaaaactctttgagcgaagagattagggctttactttttacttgttatttcaaaataacattgtgccaccaatgataaaaagtaaagattaacagataccgagatcccgagaaaagtccgtactatgtgaaatgaagaacgtacctgtaccccaaaccgacacaggtgggcaagtagagaatactaaggggcgcgagataactctctctaaggaactcggcaaaatggccccgtaacttcgggagaaggggtgccggattatatccggccgcagcgaccaggcccaagcgactgtttaccaaaaacacaggtctccgctaaatcgaaagatgacgtatgggggctgacgcctgcccagtgccggaaggttaaggaagctggttaggattaccgaagctagcgactgaagccccggtgaacggcggccgtaactataacggtcctaaggtagcgaaattccttgtcgggtaagttccgacccgcacgaaaggcgtaacgatttgggcactgtctcggagagaggctcggtgaaatagaattgtctgtgaagatgcggactacctgcacttggacagaaagaccctatgaagctttactgtagcttgagattgggctcgggcttttcttgcgcagcttaggtgggaggcttagatcctattcttttgggaatagaggagccgtcagtgagataccactctaggaaggctagagtcctaagggtgctccctttgcgggacacctaacagtctcaggtaggcagtttgactggggcggtcgcctcctaaaaggtaacggaggcgtgcaaaggttccctcaggctggacggaaatcagtcgtagagtataaaggcagaagggagcttgactgcgagactgacacgtcaagcaggggcgaaagccggccttagtgatccgacggttccgtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcacctcgatgtcggctcatcgcagcctggggcggtagtgcgtcccaagggttgggctgttcgcccatgaaagcggtacgtgagctgggttcagaacgtcgtgagacagttcggtccatatccggtgtgggcgctagagcattgagaggatccccccctagtacgagaggaccggggggtatgcaccgctggtgtaccagttctttccctacgatctgtaggtaaggatacgctgggtagctatgtgtggagtggataactgctgaaggcatctaagtaggaagcccacctcaagatgagtgctctttgaggccacggcaagactagccggtaataaggattttcagttatgaaatctttccaggctctaagtggaagctttgtaaaaagtgcagctgaggagttctgataggccaaaagtttgaccat
|
||||
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_012099_94.align.fasta
Normal file
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_012099_94.align.fasta
Normal file
@ -0,0 +1,26 @@
|
||||
>RRNA16S_NC_012099_94 count=1; cluster_weight=1; cluster=RRNA16S_NC_012099_94; cluster_score=1.000000; cluster_center=True;
|
||||
GAGGGGATGTTCGCTATATTACAAACCCTACTTTAAGTCCTTTTGTAATCTTTGGTTACA
|
||||
TCCTAAAATCTCCATTTGGTGGAGACGGTTGGATTCCTAGTGTTGATAACATGGAAGATG
|
||||
TTATTGGTGGACATATTTGGATTGGTAGTATTGAAATTTTTGGTGGTATTTGGCACATTC
|
||||
TAACAAAGCCTTTTGCTTGGGCAAGACGTGCTTTTGTATGGTCAGGTGAAGCTTATCTTT
|
||||
CATACAGTCTTGCAGCTGTTTCTTTAATGGCTTTAATTGCTGTACCTATGGTTTGGTTCA
|
||||
ATAATACTGTTTACCCTAGTGAATTCTTTGGTCCTACAGGTCCTGAAGCATCACAGTCAC
|
||||
AAGCTTTTACATTCCTTGTTCGTGACCAACGACTAGGTGCAAATGTTGCATCAGCTCAAG
|
||||
GTCCTACAGGTTTAGGTAAATACCTAATGCGTTCTCCTACAGGAGAAATTATTTTTGGTG
|
||||
GTGAAACAATGCGTTTTTGGGATTTTAGAGGTCCTTGGCTAGAGCCACTTCGTGGTCCTA
|
||||
ATGGTCTTGATCTTAATAAGCTTAAAAATGATATTCAACCTTGGCAAGAACGTCGTTCTG
|
||||
CTGAGTACATGACTCATGCACCTCTAGGTTCACTGAACTCGGTAGGTGGAGTTGCTACAG
|
||||
AAATTAACGCAGTTAACTATGTAAACCCACGTAGTTGGTTAGCAACGTCTCATTTTGTTC
|
||||
TAGGTTTCTTCTTTTTTATTGGCCACTTATGGCATGCAGGTCGTGCACGTGCTGCTGCTG
|
||||
CTGGTTTTGAAAAAGGTATTGATCGTGATAATGAAGCGGTTCTTTCTATGCGTCCACTTG
|
||||
ACTAATAGTTTGGCTAACATTCAGATTATTTAAAAATATTAGTTTTACAAAACTTTCTCT
|
||||
TCTTTTTTAGAAATAAAAGAAGAGAAAGTTTTTATTACATTTTAATTGAATTTACTTGAA
|
||||
AACGTGCTCTTGCGCGTTTAAAAGCAATATTAGCTTCAATTTTTTCTTTTCGACCATTAG
|
||||
CTTTTTCAAGAATTTCTTTCGCAGATTGATATTCAATTTCTGCTTCTTCTGGATTAATAC
|
||||
TTGAACCTAAAACAGCCTCATTAACAAGAATAGTGACTTTGTTATCTTTTACAAGAGCAA
|
||||
AACCACCCATAAGTGCCATCGAAATCCATTCTGTTCCAGTTCGAACAAGCATTACACCAA
|
||||
CATCTAGTCCTGTAATAAGTGGAGTGTGATTTTTTAATACACCCATTTGCCCAGTATTCG
|
||||
TTGGTAAAATAAGCTCTGTAGCTTCTTCGTTCCAAAAAATACGATCCGGGGCCATAATAC
|
||||
AAACTTGTAAACTCATCTTTTTTACTCCTTTTTCTTTACTTCAACTATTTATGATGCTAA
|
||||
AGAAGCACCTTTTTCGATAGCCTCATCTAGATTACCTACTAAATAGAAAGATTGCTCAGG
|
||||
AAGAGCATCTAACTGACCTGTAAGAATCATTTGGAAACCTTGAATGCTTTCTGCTAGAC
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_012099_94.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_012099_94.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_012099_94 count=1; cluster_weight=1; cluster=RRNA16S_NC_012099_94; cluster_score=1.000000; cluster_center=True;
|
||||
gaggggatgttcgctatattacaaaccctactttaagtccttttgtaatctttggttacatcctaaaatctccatttggtggagacggttggattcctagtgttgataacatggaagatgttattggtggacatatttggattggtagtattgaaatttttggtggtatttggcacattctaacaaagccttttgcttgggcaagacgtgcttttgtatggtcaggtgaagcttatctttcatacagtcttgcagctgtttctttaatggctttaattgctgtacctatggtttggttcaataatactgtttaccctagtgaattctttggtcctacaggtcctgaagcatcacagtcacaagcttttacattccttgttcgtgaccaacgactaggtgcaaatgttgcatcagctcaaggtcctacaggtttaggtaaatacctaatgcgttctcctacaggagaaattatttttggtggtgaaacaatgcgtttttgggattttagaggtccttggctagagccacttcgtggtcctaatggtcttgatcttaataagcttaaaaatgatattcaaccttggcaagaacgtcgttctgctgagtacatgactcatgcacctctaggttcactgaactcggtaggtggagttgctacagaaattaacgcagttaactatgtaaacccacgtagttggttagcaacgtctcattttgttctaggtttcttcttttttattggccacttatggcatgcaggtcgtgcacgtgctgctgctgctggttttgaaaaaggtattgatcgtgataatgaagcggttctttctatgcgtccacttgactaatagtttggctaacattcagattatttaaaaatattagttttacaaaactttctcttcttttttagaaataaaagaagagaaagtttttattacattttaattgaatttacttgaaaacgtgctcttgcgcgtttaaaagcaatattagcttcaattttttcttttcgaccattagctttttcaagaatttctttcgcagattgatattcaatttctgcttcttctggattaatacttgaacctaaaacagcctcattaacaagaatagtgactttgttatcttttacaagagcaaaaccacccataagtgccatcgaaatccattctgttccagttcgaacaagcattacaccaacatctagtcctgtaataagtggagtgtgattttttaatacacccatttgcccagtattcgttggtaaaataagctctgtagcttcttcgttccaaaaaatacgatccggggccataatacaaacttgtaaactcatcttttttactcctttttctttacttcaactatttatgatgctaaagaagcacctttttcgatagcctcatctagattacctactaaatagaaagattgctcaggaagagcatctaactgacctgtaagaatcatttggaaaccttgaatgctttctgctagac
|
||||
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_012101_388.align.fasta
Normal file
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_012101_388.align.fasta
Normal file
@ -0,0 +1,27 @@
|
||||
>RRNA16S_NC_012101_388 count=1; cluster_weight=1; cluster=RRNA16S_NC_012101_388; cluster_score=1.000000; cluster_center=True;
|
||||
ATCGATTAATTCAACTTGCTTTACCACGTATTCGAGATTTTCAAGGTTTAAGCCAACAAA
|
||||
GTTTTGATGGTCATGGAAACTATACCTTAGGTTTAAAAGAACAATTAATGTTCCCAGAAA
|
||||
TTGATTACGACAAAATCGAAAAATCTCGAGGGATGGATATTTCAATCGTTACTTCAGCCA
|
||||
AAAATGATCAAGATGCTTTTTTGCTCTTAAAAGCATTAGGAATGCCATTTAAAGCTGCTT
|
||||
AAAATTAACTTCTTTTATTTCTTTAAAATTAAAATTTCTTTTACTGTAATTACAAGTTGA
|
||||
AATATTAAATTTGTTCTTTTGCCGTTTTCGGAGGAAAGAAGTTCTCCCTTTTGCAACTCA
|
||||
TCGGCTTGAATGTTTTTGTAAAGAGAATAGAAATGAAGTTTACTTTGTTGCTCTTTCTAA
|
||||
GCAAACTGTATACCCTTCTCTCTGGAGGACCAAAGGGCCAAAGGCCTCCCCCTTCGGGGG
|
||||
AGGAACGGAGTTCTTCCCACGCGATCCTCCCCCCATTTGCGGGGAGGCCTTCGGCCCTCA
|
||||
AGGGGAAACCCAGCTCGTCCCCCTTCCACTTTGACCTGGTGTGCTTCAGCGCTTTGACCT
|
||||
GGTGTGCTTCAGAGCTTTGACCTTTCAGGCCATAAATAAAAGCTCACCCCTTTGAGACCT
|
||||
TTGGTCCTACGGTCCTTTCAAGTAATAAATAAAGCTCAAGCACACCAGGTCAAAGCGCGC
|
||||
AAATGAACAAGGTCCTCAAAAGTAAAAACTATCCAGAGGAAACAAGTTTATAAAAACTTA
|
||||
AAGAAAAAAACGAAGCACAGGGGGGAAATTAAAACGAAAGCTCCAACGATCAAATAATCT
|
||||
AAAAAACAAAAAATATAAAACTGATATTACTTTAAAAATCTAGAAATAAATATATTACTG
|
||||
GTTAACAATTCATATGGTGAATTACGCTGTAAGCGATATGCTTACTCGAATCCGAAACGG
|
||||
AATTCGAGTTAAAAAAACAAAAGTTTCTGTTATTTCAACAAATTTAACAAGAAGTATTGC
|
||||
TGAAATTTTAAAACGTGAAGGTTTTATTGAAAATTTCGCTACAACTCAAATGACAAAACC
|
||||
TTCCGTTGGAAATTTAGCAACTACCGGAAATAAAAACTCTACTTTAGATATTTATCTAAA
|
||||
ATGGTCTCAAAAAGACGGCTTAGGAAAAGCACAAAAAAATGTCTTAACAAACCTAAAGTG
|
||||
TATTAGTCGTCCAGGTGTTCGCATTTATGCAAATGCCAATAATATTCCCCAAGTTCTTGG
|
||||
TGGATTAGGCATCACAATTCTATCTACTTCAAAAGGCATCTTAACTGATTATGAAGCAAG
|
||||
AAATCAAAAAGTTGGTGGAGAAGTTCTATGTATGCTTTGGTAAAACCTATTTAACTAGCC
|
||||
AATTGCTGAACAACCTTACACTCAAGGGGTTTGAGCGGTTTGACCTGGTGTGCTTAAGCG
|
||||
CTTGGACCTGGTGTGATTGAGCGGACCTTTTAGGTCATATATTAAGCTCAATCACACCAG
|
||||
AGCTGGGGGGCCCCTTCAGGCCTTCGGCCCTCAAAGGGGTGAGCGCTTT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_012101_388.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_012101_388.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_012101_388 count=1; cluster_weight=1; cluster=RRNA16S_NC_012101_388; cluster_score=1.000000; cluster_center=True;
|
||||
atcgattaattcaacttgctttaccacgtattcgagattttcaaggtttaagccaacaaagttttgatggtcatggaaactataccttaggtttaaaagaacaattaatgttcccagaaattgattacgacaaaatcgaaaaatctcgagggatggatatttcaatcgttacttcagccaaaaatgatcaagatgcttttttgctcttaaaagcattaggaatgccatttaaagctgcttaaaattaacttcttttatttctttaaaattaaaatttcttttactgtaattacaagttgaaatattaaatttgttcttttgccgttttcggaggaaagaagttctcccttttgcaactcatcggcttgaatgtttttgtaaagagaatagaaatgaagtttactttgttgctctttctaagcaaactgtatacccttctctctggaggaccaaagggccaaaggcctcccccttcgggggaggaacggagttcttcccacgcgatcctccccccatttgcggggaggccttcggccctcaaggggaaacccagctcgtcccccttccactttgacctggtgtgcttcagcgctttgacctggtgtgcttcagagctttgacctttcaggccataaataaaagctcacccctttgagacctttggtcctacggtcctttcaagtaataaataaagctcaagcacaccaggtcaaagcgcgcaaatgaacaaggtcctcaaaagtaaaaactatccagaggaaacaagtttataaaaacttaaagaaaaaaacgaagcacaggggggaaattaaaacgaaagctccaacgatcaaataatctaaaaaacaaaaaatataaaactgatattactttaaaaatctagaaataaatatattactggttaacaattcatatggtgaattacgctgtaagcgatatgcttactcgaatccgaaacggaattcgagttaaaaaaacaaaagtttctgttatttcaacaaatttaacaagaagtattgctgaaattttaaaacgtgaaggttttattgaaaatttcgctacaactcaaatgacaaaaccttccgttggaaatttagcaactaccggaaataaaaactctactttagatatttatctaaaatggtctcaaaaagacggcttaggaaaagcacaaaaaaatgtcttaacaaacctaaagtgtattagtcgtccaggtgttcgcatttatgcaaatgccaataatattccccaagttcttggtggattaggcatcacaattctatctacttcaaaaggcatcttaactgattatgaagcaagaaatcaaaaagttggtggagaagttctatgtatgctttggtaaaacctatttaactagccaattgctgaacaaccttacactcaaggggtttgagcggtttgacctggtgtgcttaagcgcttggacctggtgtgattgagcggaccttttaggtcatatattaagctcaatcacaccagagctggggggccccttcaggccttcggccctcaaaggggtgagcgcttt
|
||||
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_012575_355.align.fasta
Normal file
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_012575_355.align.fasta
Normal file
@ -0,0 +1,26 @@
|
||||
>RRNA16S_NC_012575_355 count=1; cluster_weight=1; cluster=RRNA16S_NC_012575_355; cluster_score=1.000000; cluster_center=True;
|
||||
AAACACATCAAGGAGAGTTTGATCCTGGCTCAGAAGGAACGCTGGCAGCGTGCATAACAC
|
||||
ATGCAAGTCGAACGATGAAACATTCTTCGGAATGTGGAAGAGTGGCGAACGGGTGAGGAA
|
||||
CACGTAAGAATCTGCCCCTCGGTCGGGGACAACTCTTGGAAACGAGAGCTAATACCCGAT
|
||||
ACGCTGTGGAGTGAAAGAATTTCGCCGAGGGATGATCTTGCGTCTGATTAGCTAGTTGGT
|
||||
GTGGTAATGGCATACCAAGGCGACGATCAGTAGCTGGTCTGAGAGGATGAACAGCCACAT
|
||||
TGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATG
|
||||
GACGAAAGTCTGACGGAGCGACGCTGCGTGAAGGATGACGGCCTGCGGGTTGTAAACTTC
|
||||
TTTTCTCGAAGAAGAAGCTCTGACGGTATTCGAGGAATAAGCATCGGCTAACTCCGTGCC
|
||||
AGCAGCCGCGGTAATACGGAGGATGCAAGTGTTATTCGGAATGATTGGGCGTAAAGCGTC
|
||||
TGTAGGCTGTATAGAAAGTCTTTTGTTAAATGCCTCGGCTCAACCGAGATCCAGCAAAGG
|
||||
AAACTTCTATACTTGAGGGAAGTAGAGGTACAGGGAATTCCCGGTGGAGCGGTGAAATGC
|
||||
GTAGATATCGGGAGGAACACCAATATGGCGAAGGCACTGTACTGGGCTTTACCTGACGCT
|
||||
CAGAGACGAAAGCTAAAGGAGTGATTAGGATTAGATACCCTAGTAATTTTAGCCGTAAAC
|
||||
GATGGAAACTCACTGCCGAGCGAAATACAACGAGCGGTGGTCAAGCTAACGCGTGAAGTT
|
||||
TCCCGCCTGGGGATTACGCTTGCAAAAGTGAAACTCAAAGGAATTGACGGGGACCCGCAC
|
||||
AAGCGGTGGAGTATGTGGTTTAATTCGATGCAACACGAAGAACCTTACCAGGGTTTGAAA
|
||||
TCATTTCAAAACTCCTTGAAAGAGGAGCCTCCTTCGGGATGAAATGACAGGTGGTGCATG
|
||||
GCTGTCGTCAGCTCGTGTTGTGAAATGTCGAGTTAAGTCTCGTAACGAGCGCAACCCATG
|
||||
TCTCTTGTTGCTCACTGAGTGCTTAAGAGAGACTGCCGACCAACATCGGAGGAAGGTGTG
|
||||
GATGATGTCAAGTCAGCATGCCCCTTACATCCTGGGCTACACACGTACTACAATGGTAGG
|
||||
GACAATGAGCTGCGATCCTGCGAAGGCTAGCCAATCTCAAAAACCCTATCTCAGTTCGGA
|
||||
TTGTACTCTGCAACTCGAGTACATGAAGGTGGAATCGCTAGTAATCGCTGGTCAGCTATA
|
||||
CAGCGGTGAATACGTTCCCGGGTCTTGTACACACTGCCCGTCACACCATGGAAGCCGACT
|
||||
CTTCCCTAAGTCGTTACTCGAACCCATTGGGACGAGGATGCCGAAGGCAGGGTTGGTGAC
|
||||
TGGGGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGTGGCTGGAATACCTCCTTTT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_012575_355.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_012575_355.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_012575_355 count=1; cluster_weight=1; cluster=RRNA16S_NC_012575_355; cluster_score=1.000000; cluster_center=True;
|
||||
aaacacatcaaggagagtttgatcctggctcagaaggaacgctggcagcgtgcataacacatgcaagtcgaacgatgaaacattcttcggaatgtggaagagtggcgaacgggtgaggaacacgtaagaatctgcccctcggtcggggacaactcttggaaacgagagctaatacccgatacgctgtggagtgaaagaatttcgccgagggatgatcttgcgtctgattagctagttggtgtggtaatggcataccaaggcgacgatcagtagctggtctgagaggatgaacagccacattggaactgagacacggtccaaactcctacgggaggcagcagtggggaattttccgcaatggacgaaagtctgacggagcgacgctgcgtgaaggatgacggcctgcgggttgtaaacttcttttctcgaagaagaagctctgacggtattcgaggaataagcatcggctaactccgtgccagcagccgcggtaatacggaggatgcaagtgttattcggaatgattgggcgtaaagcgtctgtaggctgtatagaaagtcttttgttaaatgcctcggctcaaccgagatccagcaaaggaaacttctatacttgagggaagtagaggtacagggaattcccggtggagcggtgaaatgcgtagatatcgggaggaacaccaatatggcgaaggcactgtactgggctttacctgacgctcagagacgaaagctaaaggagtgattaggattagataccctagtaattttagccgtaaacgatggaaactcactgccgagcgaaatacaacgagcggtggtcaagctaacgcgtgaagtttcccgcctggggattacgcttgcaaaagtgaaactcaaaggaattgacggggacccgcacaagcggtggagtatgtggtttaattcgatgcaacacgaagaaccttaccagggtttgaaatcatttcaaaactccttgaaagaggagcctccttcgggatgaaatgacaggtggtgcatggctgtcgtcagctcgtgttgtgaaatgtcgagttaagtctcgtaacgagcgcaacccatgtctcttgttgctcactgagtgcttaagagagactgccgaccaacatcggaggaaggtgtggatgatgtcaagtcagcatgccccttacatcctgggctacacacgtactacaatggtagggacaatgagctgcgatcctgcgaaggctagccaatctcaaaaaccctatctcagttcggattgtactctgcaactcgagtacatgaaggtggaatcgctagtaatcgctggtcagctatacagcggtgaatacgttcccgggtcttgtacacactgcccgtcacaccatggaagccgactcttccctaagtcgttactcgaacccattgggacgaggatgccgaaggcagggttggtgactggggtgaagtcgtaacaaggtagccgtactggaaggtgtggctggaatacctcctttt
|
||||
@ -0,0 +1,4 @@
|
||||
>RRNA16S_NC_014346_349 count=1; cluster_weight=1; cluster=RRNA16S_NC_014346_349; cluster_score=1.000000; cluster_center=True;
|
||||
TTTTCTAGTGCTCGACGTCCTGTTGGACCCACACCAATCCATCCCGAACTTGGTAGTGAA
|
||||
ATAATAGGAGGAAAAAGTAGCCCTGCAAGGGGTGCCTTGCGGAACTCTTTTTCTAGTGCT
|
||||
AGGAT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_014346_349.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_014346_349.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_014346_349 count=1; cluster_weight=1; cluster=RRNA16S_NC_014346_349; cluster_score=1.000000; cluster_center=True;
|
||||
ttttctagtgctcgacgtcctgttggacccacaccaatccatcccgaacttggtagtgaaataataggaggaaaaagtagccctgcaaggggtgccttgcggaactctttttctagtgctaggat
|
||||
@ -0,0 +1,5 @@
|
||||
>RRNA16S_NC_014573_300 count=1; cluster_weight=1; cluster=RRNA16S_NC_014573_300; cluster_score=1.000000; cluster_center=True;
|
||||
TCTCATGGAGAGTTTGATCCTGGCTCAGGATGAACACTGGCCGTATGCTTAACACATGCA
|
||||
AGTCAAACGGGGAGGGTGGTGTTTCCAGTGGCGAACGGGTGAGTAACGCGTAAGAACCTG
|
||||
CCGGGAACAACAGCTAGAAACGGCTGCTAATACCCTGTAGGCTGAGGAGCAAGAGTAAGC
|
||||
ATCC
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_014573_300.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_014573_300.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_014573_300 count=1; cluster_weight=1; cluster=RRNA16S_NC_014573_300; cluster_score=1.000000; cluster_center=True;
|
||||
tctcatggagagtttgatcctggctcaggatgaacactggccgtatgcttaacacatgcaagtcaaacggggagggtggtgtttccagtggcgaacgggtgagtaacgcgtaagaacctgccgggaacaacagctagaaacggctgctaataccctgtaggctgaggagcaagagtaagcatcc
|
||||
@ -0,0 +1,4 @@
|
||||
>RRNA16S_NC_015359_405 count=1; cluster_weight=1; cluster=RRNA16S_NC_015359_405; cluster_score=1.000000; cluster_center=True;
|
||||
ATTTATGTCGTTACCTTGTATTCTTGCTTGCATGGAACCACCTTATCCATCCCGAACTAA
|
||||
GAAGTGAAACGTGTAAGGGGCGACAATACTTGAGGGGAGGCCCTCTGGAAAGATAGTCTA
|
||||
ATGCAAGGTACTTTCAAAAATATACGATCC
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_015359_405.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_015359_405.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_015359_405 count=1; cluster_weight=1; cluster=RRNA16S_NC_015359_405; cluster_score=1.000000; cluster_center=True;
|
||||
atttatgtcgttaccttgtattcttgcttgcatggaaccaccttatccatcccgaactaagaagtgaaacgtgtaaggggcgacaatacttgaggggaggccctctggaaagatagtctaatgcaaggtactttcaaaaatatacgatcc
|
||||
@ -0,0 +1,4 @@
|
||||
>RRNA16S_NC_015645_335 count=1; cluster_weight=1; cluster=RRNA16S_NC_015645_335; cluster_score=1.000000; cluster_center=True;
|
||||
TTCTCGGTGCCCACGTTCAATAGGACCCACGTCAATCCATCCCGAACTTGATAGTGAAAC
|
||||
TGTTGAAGAGATTGTAAAGCTGCAAGGGGGGCTTTGTGGATTTACAATCTTGGTGCCGGG
|
||||
AA
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_015645_335.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_015645_335.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_015645_335 count=1; cluster_weight=1; cluster=RRNA16S_NC_015645_335; cluster_score=1.000000; cluster_center=True;
|
||||
ttctcggtgcccacgttcaataggacccacgtcaatccatcccgaacttgatagtgaaactgttgaagagattgtaaagctgcaaggggggctttgtggatttacaatcttggtgccgggaa
|
||||
61
data/rrna/RRNA_16S/00001_RRNA16S_NC_016732_352.align.fasta
Normal file
61
data/rrna/RRNA_16S/00001_RRNA16S_NC_016732_352.align.fasta
Normal file
@ -0,0 +1,61 @@
|
||||
>RRNA16S_NC_016732_352 count=1; cluster_weight=1; cluster=RRNA16S_NC_016732_352; cluster_score=1.000000; cluster_center=True;
|
||||
AAAAAATATCAATGGAGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGTATGCTTAAC
|
||||
ACATGCAAGTCGTACGGGAAAGATTTCTATTTTTCCTAGTGGCGGACGGGTGCGTAACAC
|
||||
GTAAGAACCTACCTTTTGGAGGGGGATAACATCGGGAAACTGATGCTAATACCCCGTAAT
|
||||
AGCTGAGGAGTGAAAGCGGTTTTCCGCGCCAAGAGAGGGGCTTGCGGCTGATTAGCTAGT
|
||||
TGGTGGGGGTAAAGGCCTCCCAAGGCCACGATCAGTAGCTGGTTTGAGAGGACGATCAGC
|
||||
CACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGAGGAATTTTCCA
|
||||
CAATGGGCGAAAGCCTGATGGAGCAATACCGCGTGGGGGATGAAGGTTCGTGGATTAGTT
|
||||
TATGGTCCACTTGTAAGTAAGGTTAGTTGTTAATTAACATATGACAATTTATCGAAGAAA
|
||||
ATTCTATTACGAGGCGCCCGCAGACATCGTCGAGGACGACGAGTCTAGGTCGCCTCGTAG
|
||||
AGCTCGCCTCGCAGAGGCGACCTACAGAATTTTCTTCGAGAACGACCCCGCCCAAAGATT
|
||||
TTCAATATCCTAAAGGATATTGCCCGTGAGGGCAACTTCGATATTTGTTTTTTGTTAAGA
|
||||
TTCATTAATCTTACTTACAATAATAAATTCGGTGAATACAGGGACGCTAAGGTATACAAT
|
||||
AAATTAGTATACTATGCAAATCTGTAGCGAAGTGCGGGGAAATCTCAAGAAAAAAAAAAA
|
||||
ATTGTACCCGTAAACGCCTAAAGACTAGTTAGTGAGGATGAGAAACCAATAATCTAACCA
|
||||
CGAGCGCCGAACAACCTAATTTTTATTAGGTTGATGATATAGTCTAATCTTAAAGGAAAC
|
||||
TTTAAGAAGTATTGTATAAATAACAATACGTTAATAATATGCGTAAACCCCTTTTCTCAG
|
||||
AGAAGAAGTTCTGACGGTATCTGAGGAATAAGCTCCGGCTAAGAGATTGGCCTCCTGTTT
|
||||
TGTGAAAAACAGGGAAAATTTTCGGCTCATAACGATGAATCCTTAATTTAAAAATAATGG
|
||||
ATAAGGTGATATCGTGGGAAGTCTAAGAAACGTAAAATGAATTACGTAAGACCCCGTAAC
|
||||
GACTGAGGAAAAGCATAAGCTGAGTACGAGATAAGATGATAGTTTTATCCTGGATAGTTT
|
||||
TATCCTGTTGGAATAAAACTGAAGTCTTATAAAACGCCGACTACTTTAAAAAAGAAAATA
|
||||
AAAAGTAGAATGTATAGTCTATGCCGAAGTTAGAAACTTCGGGCTACATGAACTCTGTGC
|
||||
CAGCAGCCGCGGTTTGGCTAAAATTGCCGCAATGTATCTTAAGATACATTAAGAATTCTG
|
||||
CTTATATTGAAGGAGCCTACACAAAAAGTAGGTAATTTCAAGGGAAGCTTCTCTTTAATT
|
||||
TAAAGAGATAGCCCCTTAACGACTGACCCGAAAGGGGAGACTGATTATTGTTTATCATAA
|
||||
TATTTTAAACAAAATCGGTAATACGCAGAACCTTAGCACAATAAAAGAAACCTAGTTATG
|
||||
TGTAAACTAGAAAAACAGGAGAATAATAATAATTATGAAGATGCGATGAAAGTTGTTCGA
|
||||
GAACTTTACAAATAGTTACACATGGTTAACAACCTAAGGGTTCTGCTAAGGATAAGATAT
|
||||
AGTCTGATCCCTATTGTAAAATAGGGTGTAATCGAATACAGGGGGAGCAAGCGTTATCCG
|
||||
GAATGATTGGGCGTAAAGCGTCTGTAGGTGGTTCTTTAAGTCTACTGTCAAATACGTTGG
|
||||
CTCAACCAACGGCAGGCAGTGGAGTACTAAAGAACTAGAGTGCGGTAGAGGTAGAGGGAA
|
||||
TCCCTAGCGTAACAGTGAAATGTGTAGATTTTAGGGAGAACACCAGCGGCGAAGGCGCTC
|
||||
TACTGGGCCGATACTGACACTGAGAGACGAAAGCTAGAGGAGCGAATAGGATTAGATAAA
|
||||
TCTGGGGCGCTCTAAAATATACCCCAAAGTGTCCTCATTTCACTGAAAGGTGAGATGTGA
|
||||
ACCTAGCTATATCGGGGAAGGTCATGCTTAAAACATGAATAATCCCGAGGGAAGTATGTA
|
||||
TTTATAAGGTATACCTTTTTAAAACATACCCCTTAGAGACTAAACACTCTGGAATTATAA
|
||||
AACTTTTAGGTGGAGTTTTATACAACTTTTGTACCAAAAGGTTCCAGAGTTGTTGCAACG
|
||||
CTGGGCTTCCGAAATAAAAGAGGCGGACAAAACAACTTTATTGCCCTCATGGGCAACAAA
|
||||
GTTGCCCGTCCCCTAAGGGCTAGGACCTTGTCCGTCGCGTGAGGGGAACAATTTTGTTGT
|
||||
TTTGTCCTGAGGAAAAAACCTTTGGTTTTTTCCGACTTGTTCAACCAGAATTTCGCGCAT
|
||||
ACGTGGAAGACTTTTATGAACGAGTTATAAACGGAAGATGATATAGTCCACTGGTGGGTT
|
||||
CACCTAATAAATGGCCCGCCTTTGACCCTAGTAGTTCTAGCTGTAAACGATGGAAACTAA
|
||||
GAGGGGGTAACCCCCTTCTGTAGCTAACGCGTTAAGTTTCCCGCCTGGGGAGTATGCTCG
|
||||
CAAGAGTGAAACTCAAAGGAATTGACGGGAGACCACACAATAGGTAAACCGATAATCTGC
|
||||
CTAGTGGCTTTGTGAAAAGCTATAGTCTTTTAAACACTAAAAGTCTTCTCGTCAAAAAAG
|
||||
AAATAGTGGCATAACAATAAACTTTATTGTTATGTAAGGCAAAAAACTGGCTCAAAACGA
|
||||
CGAAAATCGAGAATTCTCGGCAACATCGTGGATTTTAAAATATACACCGGACCAGGGCCC
|
||||
CTTGGTTTTTTCCGACTCGTATAGTTATATTAGTTTGGTGTATAATATTTTAAAGTCTGT
|
||||
AACGACTCATTCGTATCTTAGTTGAGATAGTTTACTTTTTTAAAAAAAGTAAATAAGAAT
|
||||
GGACTATACAAACGTATAGTAATACGGCCAGCTCTTTTAAGGAACTCCTTTTTTTATTTT
|
||||
TATTTTTATTTTTATTTTTATTTTTATTTTTATTTCAAAACTTATTGAGTTCCTCAAGGT
|
||||
TAACAACCTTTAATAAAAGATGAATGCATAGTCTAAATTCCATTGAAAAATGGATAGTCA
|
||||
TAAATCTCTTTTGGGATTATGCGGTTTAATTTGATGCAACGCAAAGAACCTTACCAGGGT
|
||||
TTGACATGTCTAGAATTTTTCAGAAATGAAAAAGTGCTTCCTTTTTATGAAAGGAAGAAC
|
||||
TAGAACACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCGTTGACGTGTATGGTTAAGTCC
|
||||
TGCAACGAGCGCAACCCTCGTCTTTAGTTACTTTCCAAGTTCTCTAAAGAGACTGCGCGC
|
||||
GCAAGCGCTGAGGAAGGTGAGGATGACGTCAAGTCAGCATGCCCCTTACACCCTGGGCGA
|
||||
CACGCGTAATACAATGGTTGGGACAATCAGAAGCTACCCCGCAAGGGCACGCCAATCTGT
|
||||
TAAACTCAACCCTAGTTCGGATTGTAGGCTGCAACTCGCCTACATGAAGCCGGAATCTAT
|
||||
AGTAATCGCCAGTCAGCTATATGGCGGTGAATACGTTCCTGGTCTCTGT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_016732_352.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_016732_352.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_016732_352 count=1; cluster_weight=1; cluster=RRNA16S_NC_016732_352; cluster_score=1.000000; cluster_center=True;
|
||||
aaaaaatatcaatggagagtttgatcctggctcaggatgaacgctggcggtatgcttaacacatgcaagtcgtacgggaaagatttctatttttcctagtggcggacgggtgcgtaacacgtaagaacctaccttttggagggggataacatcgggaaactgatgctaataccccgtaatagctgaggagtgaaagcggttttccgcgccaagagaggggcttgcggctgattagctagttggtgggggtaaaggcctcccaaggccacgatcagtagctggtttgagaggacgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtgaggaattttccacaatgggcgaaagcctgatggagcaataccgcgtgggggatgaaggttcgtggattagtttatggtccacttgtaagtaaggttagttgttaattaacatatgacaatttatcgaagaaaattctattacgaggcgcccgcagacatcgtcgaggacgacgagtctaggtcgcctcgtagagctcgcctcgcagaggcgacctacagaattttcttcgagaacgaccccgcccaaagattttcaatatcctaaaggatattgcccgtgagggcaacttcgatatttgttttttgttaagattcattaatcttacttacaataataaattcggtgaatacagggacgctaaggtatacaataaattagtatactatgcaaatctgtagcgaagtgcggggaaatctcaagaaaaaaaaaaaattgtacccgtaaacgcctaaagactagttagtgaggatgagaaaccaataatctaaccacgagcgccgaacaacctaatttttattaggttgatgatatagtctaatcttaaaggaaactttaagaagtattgtataaataacaatacgttaataatatgcgtaaaccccttttctcagagaagaagttctgacggtatctgaggaataagctccggctaagagattggcctcctgttttgtgaaaaacagggaaaattttcggctcataacgatgaatccttaatttaaaaataatggataaggtgatatcgtgggaagtctaagaaacgtaaaatgaattacgtaagaccccgtaacgactgaggaaaagcataagctgagtacgagataagatgatagttttatcctggatagttttatcctgttggaataaaactgaagtcttataaaacgccgactactttaaaaaagaaaataaaaagtagaatgtatagtctatgccgaagttagaaacttcgggctacatgaactctgtgccagcagccgcggtttggctaaaattgccgcaatgtatcttaagatacattaagaattctgcttatattgaaggagcctacacaaaaagtaggtaatttcaagggaagcttctctttaatttaaagagatagccccttaacgactgacccgaaaggggagactgattattgtttatcataatattttaaacaaaatcggtaatacgcagaaccttagcacaataaaagaaacctagttatgtgtaaactagaaaaacaggagaataataataattatgaagatgcgatgaaagttgttcgagaactttacaaatagttacacatggttaacaacctaagggttctgctaaggataagatatagtctgatccctattgtaaaatagggtgtaatcgaatacagggggagcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggttctttaagtctactgtcaaatacgttggctcaaccaacggcaggcagtggagtactaaagaactagagtgcggtagaggtagagggaatccctagcgtaacagtgaaatgtgtagattttagggagaacaccagcggcgaaggcgctctactgggccgatactgacactgagagacgaaagctagaggagcgaataggattagataaatctggggcgctctaaaatataccccaaagtgtcctcatttcactgaaaggtgagatgtgaacctagctatatcggggaaggtcatgcttaaaacatgaataatcccgagggaagtatgtatttataaggtatacctttttaaaacataccccttagagactaaacactctggaattataaaacttttaggtggagttttatacaacttttgtaccaaaaggttccagagttgttgcaacgctgggcttccgaaataaaagaggcggacaaaacaactttattgccctcatgggcaacaaagttgcccgtcccctaagggctaggaccttgtccgtcgcgtgaggggaacaattttgttgttttgtcctgaggaaaaaacctttggttttttccgacttgttcaaccagaatttcgcgcatacgtggaagacttttatgaacgagttataaacggaagatgatatagtccactggtgggttcacctaataaatggcccgcctttgaccctagtagttctagctgtaaacgatggaaactaagagggggtaacccccttctgtagctaacgcgttaagtttcccgcctggggagtatgctcgcaagagtgaaactcaaaggaattgacgggagaccacacaataggtaaaccgataatctgcctagtggctttgtgaaaagctatagtcttttaaacactaaaagtcttctcgtcaaaaaagaaatagtggcataacaataaactttattgttatgtaaggcaaaaaactggctcaaaacgacgaaaatcgagaattctcggcaacatcgtggattttaaaatatacaccggaccagggccccttggttttttccgactcgtatagttatattagtttggtgtataatattttaaagtctgtaacgactcattcgtatcttagttgagatagtttacttttttaaaaaaagtaaataagaatggactatacaaacgtatagtaatacggccagctcttttaaggaactcctttttttatttttatttttatttttatttttatttttatttttatttcaaaacttattgagttcctcaaggttaacaacctttaataaaagatgaatgcatagtctaaattccattgaaaaatggatagtcataaatctcttttgggattatgcggtttaatttgatgcaacgcaaagaaccttaccagggtttgacatgtctagaatttttcagaaatgaaaaagtgcttcctttttatgaaaggaagaactagaacacaggtggtgcatggctgtcgtcagctcgtgcgttgacgtgtatggttaagtcctgcaacgagcgcaaccctcgtctttagttactttccaagttctctaaagagactgcgcgcgcaagcgctgaggaaggtgaggatgacgtcaagtcagcatgccccttacaccctgggcgacacgcgtaatacaatggttgggacaatcagaagctaccccgcaagggcacgccaatctgttaaactcaaccctagttcggattgtaggctgcaactcgcctacatgaagccggaatctatagtaatcgccagtcagctatatggcggtgaatacgttcctggtctctgt
|
||||
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_016733_406.align.fasta
Normal file
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_016733_406.align.fasta
Normal file
@ -0,0 +1,26 @@
|
||||
>RRNA16S_NC_016733_406 count=1; cluster_weight=1; cluster=RRNA16S_NC_016733_406; cluster_score=1.000000; cluster_center=True;
|
||||
ATTTTTGGAGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGTATGCCTAACACATGCA
|
||||
AGTCGAACTAGCTCTAGCGCAAGTTAGAGTGGGTGGCGGACGGGTGAGGAACACGTAAGA
|
||||
ACCTACCCTTTGGAGGAGGATAACTGTTGGAAACGGCAGCTAATACTCCATATGCTGAGG
|
||||
AGTAAAAGGTCGAAAGGCCGCCAAGGGATGGGCTTGCGTCTGATTAGCTAGTTGGTGAGG
|
||||
TAAATGCTTACCAAGGCGACGATCAGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGG
|
||||
ACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGAGGAATTTTCCGCAATGGGCG
|
||||
AAAGCCTGACGGAGCAATACCGCGTGAAGGATGAAGGCCTGTGGGTTGTAAACTTCTTTT
|
||||
CTCAGAGACGAATAAATGACGGTATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCA
|
||||
GCCGCGGTAAGACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTA
|
||||
GGTGGCTTTCCAAGTCTTTTGTCAAATCCCAGAGCTTAACTTTGGATCGGCACGAGAAAC
|
||||
TCGAGAGCTTGAGTATGGTAGGGGCAGAGGGAATTCCCGGTGTAGCGGTGAAATGCGTAG
|
||||
AGATCGGGAAGAACACCGATGGCGAAAGCACTCTGCTGGGCCATTACTGACACTGAGAGA
|
||||
CGAAAGCTAAGGGAGCGAATAGGATTAGATACCCTAGTAGTCTTAGCCGTAAACGATGGA
|
||||
AACTAAGTGCTTGGGCCGCGAGTAATCGCTGCTTGAGTCCTGTAGCTAACGCGTTAAGTT
|
||||
TCCCGCCTGGGAAGTATGCTCGCAAGAGTGAAACTCAAAGGAATTGACGGGGGCCCGCAC
|
||||
AAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGGGCTTGACA
|
||||
TGCCACTCTTTCGGGAGGTCATGGTGAAAGCCAGTTTAGGACACAGGTGGTGCATGGCTG
|
||||
TCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCTC
|
||||
TTGTTGCAACTTTGTTGTTATCGAGAGAGACTGCCGGTGATAAGTCGGAGGAAGGTGGGG
|
||||
ATGACGTCAAGTCAGCATGCCCCTTACGCCCTGGGCAACACACGTGCTACAATGGCCAGG
|
||||
ACAAAGAGATGCAACCTCGCAAGAGCAAGCCAACCTCAAAAACCTGGTCTCAGTTCGGAT
|
||||
TAGTCTCTGCAACCCGAGACTATGAAGCCGGAATCGCTAGTAATCGCTGGTCAGCTATAC
|
||||
AGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGGGAGCTGGCTA
|
||||
TGCCCAAAGTCGTTACCCCAACCGTTTGGAGGGGGATGCCTAAGGCAGAGCTAGTGACTG
|
||||
GGGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCACCTCCTTT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_016733_406.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_016733_406.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_016733_406 count=1; cluster_weight=1; cluster=RRNA16S_NC_016733_406; cluster_score=1.000000; cluster_center=True;
|
||||
atttttggagagtttgatcctggctcaggatgaacgctggcggtatgcctaacacatgcaagtcgaactagctctagcgcaagttagagtgggtggcggacgggtgaggaacacgtaagaacctaccctttggaggaggataactgttggaaacggcagctaatactccatatgctgaggagtaaaaggtcgaaaggccgccaagggatgggcttgcgtctgattagctagttggtgaggtaaatgcttaccaaggcgacgatcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaataccgcgtgaaggatgaaggcctgtgggttgtaaacttcttttctcagagacgaataaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggctttccaagtcttttgtcaaatcccagagcttaactttggatcggcacgagaaactcgagagcttgagtatggtaggggcagagggaattcccggtgtagcggtgaaatgcgtagagatcgggaagaacaccgatggcgaaagcactctgctgggccattactgacactgagagacgaaagctaagggagcgaataggattagataccctagtagtcttagccgtaaacgatggaaactaagtgcttgggccgcgagtaatcgctgcttgagtcctgtagctaacgcgttaagtttcccgcctgggaagtatgctcgcaagagtgaaactcaaaggaattgacgggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagggcttgacatgccactctttcgggaggtcatggtgaaagccagtttaggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaacccttgtctcttgttgcaactttgttgttatcgagagagactgccggtgataagtcggaggaaggtggggatgacgtcaagtcagcatgccccttacgccctgggcaacacacgtgctacaatggccaggacaaagagatgcaacctcgcaagagcaagccaacctcaaaaacctggtctcagttcggattagtctctgcaacccgagactatgaagccggaatcgctagtaatcgctggtcagctatacagcggtgaatacgttcccgggccttgtacacaccgcccgtcacaccacgggagctggctatgcccaaagtcgttaccccaaccgtttggagggggatgcctaaggcagagctagtgactggggtgaagtcgtaacaaggtagccgtactggaaggtgcggctggatcacctccttt
|
||||
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_020361_348.align.fasta
Normal file
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_020361_348.align.fasta
Normal file
@ -0,0 +1,26 @@
|
||||
>RRNA16S_NC_020361_348 count=1; cluster_weight=1; cluster=RRNA16S_NC_020361_348; cluster_score=1.000000; cluster_center=True;
|
||||
TTTTCCTTGAGTAAACCAGGAATTTATACGCCCGGAATGAGTCCTAATTCCTCGAGTACA
|
||||
AATGTGTAAGAGAAATAGTGTACTGACTAGGTCAATTTATTCCATGAGTCAGGAGAGCGA
|
||||
TCGGGCTGCCAAGATAAAAGAATTTCATCTTTCATTATGACGAATGAGATCTTTGGATAG
|
||||
AAGATCTCAGATTGAGATTTGCTATTCTGTCCCAACTAGATCGCACCATGTAACATTTTA
|
||||
CAATCCAAGAAGTTTTTCTAGGAACATAGGCGAGGTAATCCTGAAATGTTTGAATTCCAA
|
||||
AGAGACGCAAACAAGCATAGATCTTGGCAGCAATGCTTTTTATACCCACTCTTTTTTCAG
|
||||
CAAGATCTTTATGCAATTGCTCATGATCATCATTCAGATAGAGCAAATTGCTCTGAACCC
|
||||
TCGGAAATTCGGATTTCCAATGAGTTTAGTTTTCTAACTGTAAAACGTTCGATTAATCGC
|
||||
ATACGTAAATTAAAAGATTCAATTTTTTTATTTGGGAATTTCCATCCAAATCAATGGATG
|
||||
GATCACAATAGGAATTCTTATTCCTTCTTGATATTAGAAGGCTTTACTGTAGTCTTGGAA
|
||||
GTTTCATTCTCAATACGAGCCAAATATTCTAAATGTATGAATGGATGCAAAAGTTTCCGA
|
||||
TCCATCCATGGTCTATTCCCTCTTATAGAAGATAAATTTCCACATTCAAATTATATATCA
|
||||
GATATACGACTACCTTACGCTATTCATCCAGAAATTTTGGTTCGAATCTTTCGTCGCTGG
|
||||
ATCCGAGACGCTCCTTGTTTGCATCTATTGCGATGCATTCTATATGAATGTCGAAATAGT
|
||||
TTGAGTTCCGAGAATTCGCAAAAAGCAATTTTTGTTAGCCTGAAAGAGAATAAAAAATTC
|
||||
TATCTGTTCTTGTGGAATTCTTATGTTTGTGAATGTGAATCCATTCTAGTTCCCCTTATG
|
||||
AAGCGATTTTCTCATTCACAATTGTTGTCCTATGGATCTCTTCCCGAACGAACCCATTTT
|
||||
GATCGAAAAATCAAGCATATTCTCATATTTCGTTGTACAATTTCAACGAAAAGGATCTGG
|
||||
TTCTTAAAGGATCCTTTATTTCACTATGTGAGATATCGAGAAAGATCCCTCGTAGCGCTG
|
||||
AAGGGTAGCGCACTTCAAGAGAAAAAATGGAAATATCATCTTCTCCACTTTTGGCTACGT
|
||||
TATTCCCATCTTTGGCCCCAACCATATAGGGTATGGATTTTCGAATTACCCAGGAATTGT
|
||||
TTTTCTTTTCTCGGGTTCTCTCTGAGTATAAAAATGAAATATCTCGCGGTTAGAACAAAA
|
||||
ATGCTAGATAATTCATTCATTACTGACCTCATTACCAATGAAATTCATCCAATAGCTCCA
|
||||
ATTAGATCAATCATTTCTTTCTTGGCTAAAGAAAGGTTCTGTGACATCTTTGGTCGGCCA
|
||||
ATTAGTAAATTTGCCTGGGCCAGTCTGACAGATGACGATATCCTCGATCGAT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_020361_348.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_020361_348.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_020361_348 count=1; cluster_weight=1; cluster=RRNA16S_NC_020361_348; cluster_score=1.000000; cluster_center=True;
|
||||
ttttccttgagtaaaccaggaatttatacgcccggaatgagtcctaattcctcgagtacaaatgtgtaagagaaatagtgtactgactaggtcaatttattccatgagtcaggagagcgatcgggctgccaagataaaagaatttcatctttcattatgacgaatgagatctttggatagaagatctcagattgagatttgctattctgtcccaactagatcgcaccatgtaacattttacaatccaagaagtttttctaggaacataggcgaggtaatcctgaaatgtttgaattccaaagagacgcaaacaagcatagatcttggcagcaatgctttttatacccactcttttttcagcaagatctttatgcaattgctcatgatcatcattcagatagagcaaattgctctgaaccctcggaaattcggatttccaatgagtttagttttctaactgtaaaacgttcgattaatcgcatacgtaaattaaaagattcaatttttttatttgggaatttccatccaaatcaatggatggatcacaataggaattcttattccttcttgatattagaaggctttactgtagtcttggaagtttcattctcaatacgagccaaatattctaaatgtatgaatggatgcaaaagtttccgatccatccatggtctattccctcttatagaagataaatttccacattcaaattatatatcagatatacgactaccttacgctattcatccagaaattttggttcgaatctttcgtcgctggatccgagacgctccttgtttgcatctattgcgatgcattctatatgaatgtcgaaatagtttgagttccgagaattcgcaaaaagcaatttttgttagcctgaaagagaataaaaaattctatctgttcttgtggaattcttatgtttgtgaatgtgaatccattctagttccccttatgaagcgattttctcattcacaattgttgtcctatggatctcttcccgaacgaacccattttgatcgaaaaatcaagcatattctcatatttcgttgtacaatttcaacgaaaaggatctggttcttaaaggatcctttatttcactatgtgagatatcgagaaagatccctcgtagcgctgaagggtagcgcacttcaagagaaaaaatggaaatatcatcttctccacttttggctacgttattcccatctttggccccaaccatatagggtatggattttcgaattacccaggaattgtttttcttttctcgggttctctctgagtataaaaatgaaatatctcgcggttagaacaaaaatgctagataattcattcattactgacctcattaccaatgaaattcatccaatagctccaattagatcaatcatttctttcttggctaaagaaaggttctgtgacatctttggtcggccaattagtaaatttgcctgggccagtctgacagatgacgatatcctcgatcgat
|
||||
@ -0,0 +1,4 @@
|
||||
>RRNA16S_NC_021441_330 count=1; cluster_weight=1; cluster=RRNA16S_NC_021441_330; cluster_score=1.000000; cluster_center=True;
|
||||
TGTATATACATACATAGGATTACCTACCAATGGAAACTGCAACCTTAGTCGCTATCTCCA
|
||||
TATCTTGTTTACTTGTTAGCTTTACTGGTTATGCCCTATACACCGCCTTTGGGCAACCTT
|
||||
C
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_021441_330.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_021441_330.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_021441_330 count=1; cluster_weight=1; cluster=RRNA16S_NC_021441_330; cluster_score=1.000000; cluster_center=True;
|
||||
tgtatatacatacataggattacctaccaatggaaactgcaaccttagtcgctatctccatatcttgtttacttgttagctttactggttatgccctatacaccgcctttgggcaaccttc
|
||||
@ -0,0 +1,7 @@
|
||||
>RRNA16S_NC_023356_295 count=1; cluster_weight=1; cluster=RRNA16S_NC_023356_295; cluster_score=1.000000; cluster_center=True;
|
||||
TCTCATGGAGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCA
|
||||
AGTTGGACGGGAAGTGGTGTTTCCAGTGGCGGACGGGTGAGTAACGCGTAAGAACCTGCC
|
||||
CTTGGGAGGGGAACAACAACTGGAAACGGTTGCTAATACCCCGTAGGCTGAGGGGCAAAA
|
||||
GGAGGAATCCGCCCGAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTT
|
||||
ACCAAGGCGATGATCAGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGGACTGAGACA
|
||||
CGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAA
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_023356_295.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_023356_295.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_023356_295 count=1; cluster_weight=1; cluster=RRNA16S_NC_023356_295; cluster_score=1.000000; cluster_center=True;
|
||||
tctcatggagagttcgatcctggctcaggatgaacgctggcggcatgcttaacacatgcaagttggacgggaagtggtgtttccagtggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaactggaaacggttgctaataccccgtaggctgaggggcaaaaggaggaatccgcccgaggaggggctcgcgtctgattagctagttggtgaggcaatagcttaccaaggcgatgatcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtggggaattttccgcaa
|
||||
@ -0,0 +1,9 @@
|
||||
>RRNA16S_NC_023465_409 count=1; cluster_weight=1; cluster=RRNA16S_NC_023465_409; cluster_score=1.000000; cluster_center=True;
|
||||
CATGGAGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGTGAGT
|
||||
CGCACGGGAAGTGGTGTTTCTAGTGGCGGACGGGTGAGTAACGCGCAAGAACCTGCCCTT
|
||||
GGGAGGGGAACAAGGGCTGGAAACGGTTGCTAATACCCCCCCGCTGAGGAGCAAAAGGAG
|
||||
GAATCCGCCTGAGGAAGGGCTTGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCA
|
||||
AGGTTATGATCAGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGC
|
||||
CCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGGACGAAAGCCTGACG
|
||||
GAGCAATGCCGCGTGGAGGTAAAAGGCCCACGGGTCATGAACTTTTTTTACCAGAGAAGA
|
||||
AGCAA
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_023465_409.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_023465_409.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_023465_409 count=1; cluster_weight=1; cluster=RRNA16S_NC_023465_409; cluster_score=1.000000; cluster_center=True;
|
||||
catggagagttcgatcctggctcaggatgaacgctggcggcatgcttaacacatgtgagtcgcacgggaagtggtgtttctagtggcggacgggtgagtaacgcgcaagaacctgcccttgggaggggaacaagggctggaaacggttgctaatacccccccgctgaggagcaaaaggaggaatccgcctgaggaagggcttgcgtctgattagctagttggtgaggcaatagcttaccaaggttatgatcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtggggaattttccgcaatggggacgaaagcctgacggagcaatgccgcgtggaggtaaaaggcccacgggtcatgaactttttttaccagagaagaagcaa
|
||||
45
data/rrna/RRNA_16S/00001_RRNA16S_NC_023775_366.align.fasta
Normal file
45
data/rrna/RRNA_16S/00001_RRNA16S_NC_023775_366.align.fasta
Normal file
@ -0,0 +1,45 @@
|
||||
>RRNA16S_NC_023775_366 count=1; cluster_weight=1; cluster=RRNA16S_NC_023775_366; cluster_score=1.000000; cluster_center=True;
|
||||
AACAAGCATTGATCCGAAGATTCCCGAATAGGGCAACCTTTTATACTTTTTGCTGAATTC
|
||||
ATAAGCAAAAAAGAGACAACTCAGTGAACTGAAACATCTTATTAACTGAAGGAAAATAAA
|
||||
GCAAACGCGATTTCCCGAGTAGTGGCGAGCGAAAAGGAAACAGCCTAAACCAATTTTTAA
|
||||
AATTGGGGTTGTGGGATAACCAAAAAATATTTTTAAAAATATTTTTCAAGTAGTTATTTA
|
||||
ATTATAAATTAGACGAAGCAGCTGAATCCTGCACCATAGATGGTGAAAGTCCAGTCGTCA
|
||||
AAAATTCAAATTTAACTATGTGTTTTTCCCAAGTAGCACGGGACACGAGAAATCCCGTGT
|
||||
GAATCAGCGAGGACCACCTCGTAAGGCTAAATACTCCTAGATGACCGATAGTGAAATAGT
|
||||
ACCGTGAGGGAAAGGTGAAAAGAACCCCTGAAGGGGAGTGAAATAGAACATGAAATCCTA
|
||||
TGCTGACAAACAGTGGGAGGTTTTTTTTAAACTGACCGCGTGCCTGTTGAAGAATGAGCC
|
||||
GGCGACTTAGAAAAAGTGGCGTGGTTAAGGAAAAATTCCGAAGCCTTAGCGAAAGCGAGT
|
||||
CTGAATAGGGCGATCAAATATTTTAATATTTACAATTTAGTCATTTTTTCTAGACCCGAA
|
||||
CCCGGGTGATCTAACCATGACCAGGATGAAACTTGGGTGATACCAAGTGAAGGTCCGAAC
|
||||
CGACCGATGTTGAAAAATCGGCGGATGAGTTGTGGTTAGCGGTGAAATACCAGTCGAACC
|
||||
CGGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTACATCTAGTCTATCTA
|
||||
GGGGTAAAGCACTGTTTCGGTGCGGGCTGTGAAAACGGTACCAAATCGTGGCAAACTCTG
|
||||
AATACTAGAAATGACGGTGTAGTAGTGAGACTGTGGGGGATAAGCTCCATTGTCAAGAGG
|
||||
GAAACAGCCCAGACCACCAGCTAAGGCCCCAAAATGGTAATGTAGTGACAAAGGAGGTGA
|
||||
AAATGCAAACACAACCAGGAGGTTGGCTTAGAAGCAGCCATCCTTTAAAGAGTGCGTAAT
|
||||
AGCTCACTGGTACTAGCGTTTTTGCGCCGAAAATGTACGGGACTTAATTATCTGCCGAAG
|
||||
CTGTGGGATATATGAAAATAATGTATATATAAAAATACAATTTATATCGGTAGGGGAGCG
|
||||
TTCTGCTTTAGGGTGAAGTTTAAATGTAAGTTTAGATGGACCAAGCAGAAGTGAGAATGT
|
||||
CGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGATTCCTT
|
||||
CACTAGGTTCGTCCATGAAGGGTGAGTCAGGACCTAAGGCGAGGCCGAACGGCGTAGTCG
|
||||
ATGGCAAACAGGTTAATATTCCTGTACTGTTTTGTATTTGATACCAGGGGACAGAAGAGG
|
||||
TAACAATTAGCCGTTATTGGATTTCGGTGGAAACTTGCAAAGCTGGGAAAAGAAAAAAAA
|
||||
CTTCTTCCTTTTTAAAGCTAACGAGTGATACGTTTGTATTTTATTTATAAAATATGAATT
|
||||
AATTTCTTATCATATTCTCAAGAAAAGCCTGTATTATCTATAAATGCAAAACACCTGTAC
|
||||
CATAAACCGACACAGGTAGGTAGGTAGAGTATACCAAGGGGCGCGAGATAACTCTCTCTA
|
||||
AGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCAAGGGGTGATTTTTC
|
||||
ATCTTTTGGCCGCAGTGACCAGGCCCAGGCGACTGTTTATCAAAAACACAGGTCTCCGCA
|
||||
AAGTCGTAAGACAACATATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAAAGAAGTA
|
||||
GGTTATTCTTTTTTAAGAAAAAGCTTGCGACTGAAGCCCCGGTGAACGGCGGCCGTAACT
|
||||
ATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGATAAGTCCCGACCCGCACGAAAGGCG
|
||||
TAACGATCTGGGCGCTGTCTCGGAGAGAGACTCGGTGAAATAGACATGTCTGTGAAGATG
|
||||
CGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTGACTGTAGCCTGAAATTGAA
|
||||
TTTGGGTTTTTTTTGCGCAGACTAGGTGGGAGGCGTTGATAATTTTCTTTTGGGAAAATT
|
||||
GGAGCCAACAGTGAGAGACCACTCTGGAAAAGCTAGAATTCTAATGGCGTTCCTTGAAGC
|
||||
AGGACGCTTGACAGTTTCAGGTGGGCAGTTTGACTGGGGCGGTCATCTCTTAAAAGGTAA
|
||||
CAGAGATGTGCAAAGGTTCCTTCAGGCTGGACGGAAATCAGCCGTAGAGTATAAAGGCAG
|
||||
AAGGGAGCTTGACTGTAAGACCTACAAGTCAAACAGGGGCGAAAGCCGGCCTTAGTGATC
|
||||
CGACGGTACCGAGTGGAAGGGCCGTCGCTAAACGGATAAAAGTTACTCTAGGGATAACAG
|
||||
GCTGATCTTCCCCAAGAGTTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCAT
|
||||
CGCAACCTGGGGCGGTAGTACGTCCCAAGGGTTGGGCTGTTCGCCCATGAAAGCGGTACG
|
||||
TGAGCTGGGTTCAGAACGT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_023775_366.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_023775_366.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_023775_366 count=1; cluster_weight=1; cluster=RRNA16S_NC_023775_366; cluster_score=1.000000; cluster_center=True;
|
||||
aacaagcattgatccgaagattcccgaatagggcaaccttttatactttttgctgaattcataagcaaaaaagagacaactcagtgaactgaaacatcttattaactgaaggaaaataaagcaaacgcgatttcccgagtagtggcgagcgaaaaggaaacagcctaaaccaatttttaaaattggggttgtgggataaccaaaaaatatttttaaaaatatttttcaagtagttatttaattataaattagacgaagcagctgaatcctgcaccatagatggtgaaagtccagtcgtcaaaaattcaaatttaactatgtgtttttcccaagtagcacgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctagatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaacccctgaaggggagtgaaatagaacatgaaatcctatgctgacaaacagtgggaggttttttttaaactgaccgcgtgcctgttgaagaatgagccggcgacttagaaaaagtggcgtggttaaggaaaaattccgaagccttagcgaaagcgagtctgaatagggcgatcaaatattttaatatttacaatttagtcattttttctagacccgaacccgggtgatctaaccatgaccaggatgaaacttgggtgataccaagtgaaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctagtctatctaggggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaatcgtggcaaactctgaatactagaaatgacggtgtagtagtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagctaaggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaacacaaccaggaggttggcttagaagcagccatcctttaaagagtgcgtaatagctcactggtactagcgtttttgcgccgaaaatgtacgggacttaattatctgccgaagctgtgggatatatgaaaataatgtatatataaaaatacaatttatatcggtaggggagcgttctgctttagggtgaagtttaaatgtaagtttagatggaccaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcactaggttcgtccatgaagggtgagtcaggacctaaggcgaggccgaacggcgtagtcgatggcaaacaggttaatattcctgtactgttttgtatttgataccaggggacagaagaggtaacaattagccgttattggatttcggtggaaacttgcaaagctgggaaaagaaaaaaaacttcttcctttttaaagctaacgagtgatacgtttgtattttatttataaaatatgaattaatttcttatcatattctcaagaaaagcctgtattatctataaatgcaaaacacctgtaccataaaccgacacaggtaggtaggtagagtataccaaggggcgcgagataactctctctaaggaactcggcaaaatgaccccgtaacttcgggagaaggggtgccaaggggtgatttttcatcttttggccgcagtgaccaggcccaggcgactgtttatcaaaaacacaggtctccgcaaagtcgtaagacaacatatgggggctgacgcctgcccagtgccggaaggttaaagaagtaggttattcttttttaagaaaaagcttgcgactgaagccccggtgaacggcggccgtaactataacggtcctaaggtagcgaaattccttgtcggataagtcccgacccgcacgaaaggcgtaacgatctgggcgctgtctcggagagagactcggtgaaatagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttgactgtagcctgaaattgaatttgggttttttttgcgcagactaggtgggaggcgttgataattttcttttgggaaaattggagccaacagtgagagaccactctggaaaagctagaattctaatggcgttccttgaagcaggacgcttgacagtttcaggtgggcagtttgactggggcggtcatctcttaaaaggtaacagagatgtgcaaaggttccttcaggctggacggaaatcagccgtagagtataaaggcagaagggagcttgactgtaagacctacaagtcaaacaggggcgaaagccggccttagtgatccgacggtaccgagtggaagggccgtcgctaaacggataaaagttactctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctcatcgcaacctggggcggtagtacgtcccaagggttgggctgttcgcccatgaaagcggtacgtgagctgggttcagaacgt
|
||||
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_024167_326.align.fasta
Normal file
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_024167_326.align.fasta
Normal file
@ -0,0 +1,27 @@
|
||||
>RRNA16S_NC_024167_326 count=1; cluster_weight=1; cluster=RRNA16S_NC_024167_326; cluster_score=1.000000; cluster_center=True;
|
||||
TCTCTATGAGAGTTTGATCCTGGCTCAGGATGAACGCTAGCGGTTTGCCTAACACATGCA
|
||||
AGTTGCACGGCGCCATGCCTCTCGAGGGATGGCGGAGTGGCGGACGGGTGAGGAACGCGT
|
||||
AAGGACCTGCCCCTGGGAGGGGGATAACAGCTGGAAACGGCTGCTAATACCCCATATCCT
|
||||
GAGGAGGGAAAGGAGAGATCCGCCCAGGGAGGGGCTTGCGTCTGATTAGCTAGTTGGGGG
|
||||
GGTAATGGCCTCCCAAGGCAACGATCAGTTGCTGGTCTGAGAGGATGATCAGCCACACTG
|
||||
GGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGAGGAATCTTCCGCAATGGG
|
||||
CGAAAGCCTGACGGGGCAATGCCGCGTGGAGGATGAAGGCCCAATGGGTCGTAAACTTCT
|
||||
TTAGATCAGAGACGAAGAGATGACGGTACCTGAAGAACTAAGCATCGGCTAAACCCCGTG
|
||||
CCAGCAGCCGCGGTAAGACGGGGGATGCGAGCGTTATCCGGAATGATTGGGCGTAAAGGG
|
||||
TCCGCAGGTGGCCCGGTCAGTCCGCTGTCAAAACCTGGGGCTCAACCCTGGAGAGGCGGC
|
||||
GGAGACCACCGGGCTTGAGTCCGGTAGGGGCAGAGGGAATTCCCGGTGGAGCGGTGAAAT
|
||||
GCGTAGAGATCGGGAAGAACGCCAAGGGCGAAGGCACTCTGCTAGGCCTGATTTCGCGAC
|
||||
TGACACTCAGGGACGAGAGCCAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTGGC
|
||||
CGTAAACGATGGATACCAAGCCCTGCGCGTATCGACCCGGGCAGGGCTGTAGCTAACGCA
|
||||
TGAAGTATCCCGCCTGGGGAGTACGCTCGCAAGAGTGAAACTCAAAGGAATTGACGGGAG
|
||||
CCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGGG
|
||||
CTTGACATGCCGCGAACCCCCCTGAGAGGGGGGGGTGCCTTCGGGAGCGCGGACACAGGT
|
||||
GGTGCATGGCTGTCGTCAGCTCGTGTCGTAAGATGTTGGGTTCAGTCCCGCAACGAGCGC
|
||||
AACCCCCGTCTCTAGTTGCCCACAATTCGGCACCCTAGAGAGACCGCCGGTGTTAAGCCG
|
||||
GAGGAAGGTGGGGATGAGGTCAAGTCAACATGCCCCTTTTGCCCTGGGCGACACACGTGC
|
||||
TACAATGGCCGGGACAAAGAGATGCGACCCCGCAAGGGCCAGCCTGACCTCGTAAACCCG
|
||||
GCCTCAGTTCGGATTGTAGGCTGCAACCCGCCTACATGAAGGAGGAATCGCTAGTAATCA
|
||||
CCGGTCAGCCATACGGTGGTGAATCCGTTCCCGGGCTTTGCACACACCGCCCGTCACACT
|
||||
ATGGGAATCGGCCATGCCCCAAGTCGTTACCCCAACCCGTAGGGAGGGGGATGCCAAAGG
|
||||
CAGGGCTGGTGACTAAAGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGTGGCTGGA
|
||||
TCACCTCCTTC
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_024167_326.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_024167_326.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_024167_326 count=1; cluster_weight=1; cluster=RRNA16S_NC_024167_326; cluster_score=1.000000; cluster_center=True;
|
||||
tctctatgagagtttgatcctggctcaggatgaacgctagcggtttgcctaacacatgcaagttgcacggcgccatgcctctcgagggatggcggagtggcggacgggtgaggaacgcgtaaggacctgcccctgggagggggataacagctggaaacggctgctaataccccatatcctgaggagggaaaggagagatccgcccagggaggggcttgcgtctgattagctagttgggggggtaatggcctcccaaggcaacgatcagttgctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtgaggaatcttccgcaatgggcgaaagcctgacggggcaatgccgcgtggaggatgaaggcccaatgggtcgtaaacttctttagatcagagacgaagagatgacggtacctgaagaactaagcatcggctaaaccccgtgccagcagccgcggtaagacgggggatgcgagcgttatccggaatgattgggcgtaaagggtccgcaggtggcccggtcagtccgctgtcaaaacctggggctcaaccctggagaggcggcggagaccaccgggcttgagtccggtaggggcagagggaattcccggtggagcggtgaaatgcgtagagatcgggaagaacgccaagggcgaaggcactctgctaggcctgatttcgcgactgacactcagggacgagagccaggggagcgaatgggattagataccccagtagtcctggccgtaaacgatggataccaagccctgcgcgtatcgacccgggcagggctgtagctaacgcatgaagtatcccgcctggggagtacgctcgcaagagtgaaactcaaaggaattgacgggagcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagggcttgacatgccgcgaacccccctgagaggggggggtgccttcgggagcgcggacacaggtggtgcatggctgtcgtcagctcgtgtcgtaagatgttgggttcagtcccgcaacgagcgcaacccccgtctctagttgcccacaattcggcaccctagagagaccgccggtgttaagccggaggaaggtggggatgaggtcaagtcaacatgccccttttgccctgggcgacacacgtgctacaatggccgggacaaagagatgcgaccccgcaagggccagcctgacctcgtaaacccggcctcagttcggattgtaggctgcaacccgcctacatgaaggaggaatcgctagtaatcaccggtcagccatacggtggtgaatccgttcccgggctttgcacacaccgcccgtcacactatgggaatcggccatgccccaagtcgttaccccaacccgtagggagggggatgccaaaggcagggctggtgactaaagtgaagtcgtaacaaggtagccgtactggaaggtgtggctggatcacctccttc
|
||||
@ -0,0 +1,4 @@
|
||||
>RRNA16S_NC_024817_113 count=1; cluster_weight=1; cluster=RRNA16S_NC_024817_113; cluster_score=1.000000; cluster_center=True;
|
||||
GTAATCGTGCTTCAAGCGCAAAGGAACCACACTATTCCATCTCGAACTAGCCTGTGAAAC
|
||||
TTTGTAGCGAGGAACAAGGTATGGGGGACACCCCATGTAAACATTCCTTCAGTGCGATTT
|
||||
T
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_024817_113.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_024817_113.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_024817_113 count=1; cluster_weight=1; cluster=RRNA16S_NC_024817_113; cluster_score=1.000000; cluster_center=True;
|
||||
gtaatcgtgcttcaagcgcaaaggaaccacactattccatctcgaactagcctgtgaaactttgtagcgaggaacaaggtatgggggacaccccatgtaaacattccttcagtgcgatttt
|
||||
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_024829_376.align.fasta
Normal file
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_024829_376.align.fasta
Normal file
@ -0,0 +1,26 @@
|
||||
>RRNA16S_NC_024829_376 count=1; cluster_weight=1; cluster=RRNA16S_NC_024829_376; cluster_score=1.000000; cluster_center=True;
|
||||
AGGGTGCATAAGGATGTTATGCTCAGCTTGGAATACGATCATGAAGTTGAACGTTCCGGA
|
||||
GATACCTAGAGGCATACCATCAGAGAAAGAACCCTGACCGATTGGGTAGATCAAGAAAAC
|
||||
TGCGAATGCAGCTGCAACTGGTGCAGAGTAAGCAACAGCAATCCAAGGACGCATACCTAG
|
||||
ACGGAAAGATAGTTCCCACTCACGACCCATGTAAGCACAGATTCCGATTAGGAAGTGACA
|
||||
AAGGATTAGTAGGTAAGGCCCACCGTTGTAAAGCCACTCATCAAGGGAAGCAGCTTCCCA
|
||||
GATTGGGTAGAAGTGCATACCGATTGCGTTACTCATAGGAATAACAGCACCAGAAATAAT
|
||||
GTTGTTCCCGTAAAGAAGGGAACCAGAAACTGGCTCACGGATACCATCAATATCTACAGG
|
||||
AGGAGCTGCAACGAATGCAATGATGAATACGGAGATAGCAGTCAATAGGCAAGGAATCAT
|
||||
CAAAACACCAAACCAACCAATGTATAGGCGGTTCTCAGTACTAGTGATCCAATCACAGAA
|
||||
ACGACCCCATAAGCTGGAGCTTTCACGTCTTTCTAAAATAGCAGTCATGATTAATTAAGT
|
||||
TTTTACGAATGTAGAGATTTTCCCAAGCTTCCAAGAAAACTTGTTCTTTATAGTATACCA
|
||||
CATCTAGAGGCCAACAAAGAAAAAAGAAAAATAAATAACAAGAAAAAATAAATATTAAAA
|
||||
AATAAATTAATTTTGTGTGCTTTTTAGAATACCGCTGGTCGGACTCGAACCGACACGGGA
|
||||
AGCCCACTACATTTTGAGTGTAGCGTGTCTACCAATTCCACCACAGCGGCATATTAGTAG
|
||||
TATATCGGAAAGAATCCAGTCCTTCCAACTTTAATTTAAGTATGGATTGCCTGGTGATCC
|
||||
AGGCAATCCATACTTAAATTAAAGTTGGAGTTTGAGAAGTGCTTAAACGAGCTAACTCAA
|
||||
ATAAGGAATCACCAGCTATTCCTGCCAAGACAGTACTAATGACACAAACTAAAATACCAA
|
||||
CCTCAAGAGGTTGGAGGATCTGTTGGGCCCATCCTCGAGGTGGGTACTGAAGAACCGAAA
|
||||
GAGACATTTCTTCCGAAGACTTGACCAACATAATTTTAATAGCTAAAAAAACAATAAACT
|
||||
GTTTGGTTTATTAGTTGGTTATTTCAGAAGAAAAATCTTAAGTTACTTTGGCATGTACAC
|
||||
AATGAGAAACCAATTACCAGCTCCCTTTATATCTGGATAATTTACATAAATTAGGATTTT
|
||||
AGGTAAGCCATGCACAATAGTTGACTATATATTCCTTGACTCTTTATTCTATGTAACTTT
|
||||
ATGATTTAACACACTAATGATTTACTTAAAACAAAATACCAATCACTGTTGTACACTTTC
|
||||
CAAACTAATTGAGGGTTGTAATTCGGAAAAGAGTCCAATAGATACAACTAGACAGCCTTT
|
||||
TGAATGTAAACCCTCTTTTTAAGAGAATTACAAT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_024829_376.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_024829_376.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_024829_376 count=1; cluster_weight=1; cluster=RRNA16S_NC_024829_376; cluster_score=1.000000; cluster_center=True;
|
||||
agggtgcataaggatgttatgctcagcttggaatacgatcatgaagttgaacgttccggagatacctagaggcataccatcagagaaagaaccctgaccgattgggtagatcaagaaaactgcgaatgcagctgcaactggtgcagagtaagcaacagcaatccaaggacgcatacctagacggaaagatagttcccactcacgacccatgtaagcacagattccgattaggaagtgacaaaggattagtaggtaaggcccaccgttgtaaagccactcatcaagggaagcagcttcccagattgggtagaagtgcataccgattgcgttactcataggaataacagcaccagaaataatgttgttcccgtaaagaagggaaccagaaactggctcacggataccatcaatatctacaggaggagctgcaacgaatgcaatgatgaatacggagatagcagtcaataggcaaggaatcatcaaaacaccaaaccaaccaatgtataggcggttctcagtactagtgatccaatcacagaaacgaccccataagctggagctttcacgtctttctaaaatagcagtcatgattaattaagtttttacgaatgtagagattttcccaagcttccaagaaaacttgttctttatagtataccacatctagaggccaacaaagaaaaaagaaaaataaataacaagaaaaaataaatattaaaaaataaattaattttgtgtgctttttagaataccgctggtcggactcgaaccgacacgggaagcccactacattttgagtgtagcgtgtctaccaattccaccacagcggcatattagtagtatatcggaaagaatccagtccttccaactttaatttaagtatggattgcctggtgatccaggcaatccatacttaaattaaagttggagtttgagaagtgcttaaacgagctaactcaaataaggaatcaccagctattcctgccaagacagtactaatgacacaaactaaaataccaacctcaagaggttggaggatctgttgggcccatcctcgaggtgggtactgaagaaccgaaagagacatttcttccgaagacttgaccaacataattttaatagctaaaaaaacaataaactgtttggtttattagttggttatttcagaagaaaaatcttaagttactttggcatgtacacaatgagaaaccaattaccagctccctttatatctggataatttacataaattaggattttaggtaagccatgcacaatagttgactatatattccttgactctttattctatgtaactttatgatttaacacactaatgatttacttaaaacaaaataccaatcactgttgtacactttccaaactaattgagggttgtaattcggaaaagagtccaatagatacaactagacagccttttgaatgtaaaccctctttttaagagaattacaat
|
||||
@ -0,0 +1,4 @@
|
||||
>RRNA16S_NC_025524_356 count=1; cluster_weight=1; cluster=RRNA16S_NC_025524_356; cluster_score=1.000000; cluster_center=True;
|
||||
AAAGCTGGTGGCCTAGCCAGGTTGGTCCCATGGCAATCCATCCCGAACTTGCACATGAAA
|
||||
CGGCCTGGGAGTGACAATACTTGTACCGAAGGGTACTGGAAAGATAACTTGTTGCCAGCA
|
||||
TT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025524_356.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025524_356.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_025524_356 count=1; cluster_weight=1; cluster=RRNA16S_NC_025524_356; cluster_score=1.000000; cluster_center=True;
|
||||
aaagctggtggcctagccaggttggtcccatggcaatccatcccgaacttgcacatgaaacggcctgggagtgacaatacttgtaccgaagggtactggaaagataacttgttgccagcatt
|
||||
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_025525_126.align.fasta
Normal file
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_025525_126.align.fasta
Normal file
@ -0,0 +1,27 @@
|
||||
>RRNA16S_NC_025525_126 count=1; cluster_weight=1; cluster=RRNA16S_NC_025525_126; cluster_score=1.000000; cluster_center=True;
|
||||
TATCATGGAGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCA
|
||||
AGTCGAACGGAATTAAGTTTTACATTTTGAATCCTCAAAATGCGAGCTTAATTTAGTGGC
|
||||
GGACGGGTGAGTAACGCGTAAGAACCTACCTTTAGGAGGGGGACAACAGCTGGAAACGGC
|
||||
TGCTAATACCCCATATGCTGAGGAGTGAAATGGTGTAACAACCGCCTAAAGATGGGCTTG
|
||||
CGTCTGATTAGCTTGTTGGTAAGGTAAAGGCTTACCAAGGCAACGATCAGTAGCTGGTCT
|
||||
GAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCA
|
||||
GTGAGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGATGAAG
|
||||
GCCCGTGGGTCGTAAACTCCTTTTCTCAGAGAAGAATTTCTGACGGTATCTGAGGAATAA
|
||||
GCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGGA
|
||||
ATGATTGGGCGTAAAGCGTTTGTAGGTGGTTTATTAAGTCTTCTGTCAAAGCTCAGGGCT
|
||||
TAACCCTGTTTAGGCAGTAGAAACTAATAGGCTAGAGTACGGTAGGGGCAGAGGGAATTC
|
||||
CCGGTGTAGCGGTGAAATGCGCAGATATCGGGAAGAACACCGATGGCGAAAGCACTCTGC
|
||||
TGGGCCGAAACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCA
|
||||
GTAGTCCTAGCCGTAAACGATGGATACTTAATGGTGGAAGGCGATATTCCCCTCGGGGAG
|
||||
TATTAAATTTCACCATTGTAGCTAACGCGATAAGTATCCCGCCTGGGGAGTATGCTCGCA
|
||||
AGAGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAAT
|
||||
TCGATGCAACGCGAAGAACCTTACCAGGGCTTGACATGCCGTTAGTTCTCTTGAAAAAGA
|
||||
GAAGTTCGCCCGTAAAAAGGCCGACGGACACAGGTGGTGCATGGCTGTCGTCAGCTCGTG
|
||||
TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTGTTAGTTGTTTTTTA
|
||||
TATCAAACTACCAAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCA
|
||||
TCATGCCCCTTATGCCCTGGGCTACACACGTGCTACAATGGCCGGGACAAAGAGATGCGA
|
||||
CCCTGCGAAGGTAAGCCAACCTCAAAAACCCGGTCTCAGTTCGGATTGCAGGCTGCAACT
|
||||
CGCCTGCATGAAGGCGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGAATACGT
|
||||
TCCCGGGCCTTGTACACACCGCCCGTCACACCATGGAAGCTGGCTATGCCCAAAGTCGTT
|
||||
GCCCCAACTTTTTTAGAGGGGGATGCCTAAGGCAGAGCTAGTGACTGGGGTGAAGTCGTA
|
||||
ACAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCACCTCCTTT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025525_126.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025525_126.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_025525_126 count=1; cluster_weight=1; cluster=RRNA16S_NC_025525_126; cluster_score=1.000000; cluster_center=True;
|
||||
tatcatggagagtttgatcctggctcaggatgaacgctggcggcatgcttaacacatgcaagtcgaacggaattaagttttacattttgaatcctcaaaatgcgagcttaatttagtggcggacgggtgagtaacgcgtaagaacctacctttaggagggggacaacagctggaaacggctgctaataccccatatgctgaggagtgaaatggtgtaacaaccgcctaaagatgggcttgcgtctgattagcttgttggtaaggtaaaggcttaccaaggcaacgatcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaatgccgcgtggaggatgaaggcccgtgggtcgtaaactccttttctcagagaagaatttctgacggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtttgtaggtggtttattaagtcttctgtcaaagctcagggcttaaccctgtttaggcagtagaaactaataggctagagtacggtaggggcagagggaattcccggtgtagcggtgaaatgcgcagatatcgggaagaacaccgatggcgaaagcactctgctgggccgaaactgacactgagagacgaaagctaggggagcgaatgggattagataccccagtagtcctagccgtaaacgatggatacttaatggtggaaggcgatattcccctcggggagtattaaatttcaccattgtagctaacgcgataagtatcccgcctggggagtatgctcgcaagagtgaaactcaaaggaattgacgggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagggcttgacatgccgttagttctcttgaaaaagagaagttcgcccgtaaaaaggccgacggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaacccttgttgttagttgttttttatatcaaactaccaagactgccggtgataagccggaggaaggtgaggatgacgtcaagtcatcatgccccttatgccctgggctacacacgtgctacaatggccgggacaaagagatgcgaccctgcgaaggtaagccaacctcaaaaacccggtctcagttcggattgcaggctgcaactcgcctgcatgaaggcggaatcgctagtaatcgccggtcagccatacggcggtgaatacgttcccgggccttgtacacaccgcccgtcacaccatggaagctggctatgcccaaagtcgttgccccaacttttttagagggggatgcctaaggcagagctagtgactggggtgaagtcgtaacaaggtagccgtactggaaggtgcggctggatcacctccttt
|
||||
60
data/rrna/RRNA_16S/00001_RRNA16S_NC_025526_91.align.fasta
Normal file
60
data/rrna/RRNA_16S/00001_RRNA16S_NC_025526_91.align.fasta
Normal file
@ -0,0 +1,60 @@
|
||||
>RRNA16S_NC_025526_91 count=1; cluster_weight=1; cluster=RRNA16S_NC_025526_91; cluster_score=1.000000; cluster_center=True;
|
||||
CTGTTTATCATCGATGTATATTGAACTCTATACATACTCACATAAGCGTTCATTAAGAAA
|
||||
TGAATCACTTTTGCAGATCTTTTACAGGTTTCCTTCGGCACCACCTTCGGTGGAAGCCTT
|
||||
CCACCGTCGCCTCTTCACCTTCGGTGATCGCCAGAGGCGAAGGCGTCGCCGTCCACCAGA
|
||||
GGTGGTGGGGAACACCAGAGGTGGTTGGTGGTGCGATAACCTTTGGTTACCACCAAAGGT
|
||||
GGACACCTTCAGTGGTAGCGAGGCGAAGATTAAAGGTGGTGAGAATAGAGAAAAAAGGCA
|
||||
CGAAGTGCTGACCCTCCACCAAAGGTGGTGGGGAAGGAATTCTTGACACGTCGTAAATAC
|
||||
CTTTACCAACAAGTTTTTGTTTCTGACGTGGCTCAACATTATTGACTAAGAAAAACTTAG
|
||||
TATAAGCTTGACAAATGAAGAAATAATTATTAGACTAAGGAAATAATTGTAAGCACTTTG
|
||||
CATAATTTTGCGCTATTTTTTACACTATTGGGTTATACAATGGTGTGTTAATACTATAGT
|
||||
ATATAATGTACATGGTGGATGCTTACTTCGGTTTGTACGAATTTTCCAGATCAGGTAGTG
|
||||
TTAAAAAATTTAACTGATTTGCTATTATCTCTATTCCTTCCTTCCCGATCACCGACGATT
|
||||
AGTACCAAAGGTGATCGCCTCCGGCGAACACCTATGGTGGTGAGCAAGAAAGCCAAAGGC
|
||||
TATTAGCTCAGTTGGTTAGAGCGCGCCCCTGATAAGGGCGAGGTCGCTAGTTCAAATCTA
|
||||
GTATAGCCTACCCAAGAAGCAAAGCTTCTAGAGCAAAGCTTCTAGAGCAAAGCCGTCGGA
|
||||
ATGGAGTATACCCGAAAGGTACCCGGACATTGGTTCGGTAAGTAAAGTTTTCAAGCTGTG
|
||||
CTTGATGGCTATGAATCGGTGTATGATGTTGAGGTTTGTCATAAGCAAAGCAAGAAGCCG
|
||||
AGGCTTGAGACTTAGCGTCGCTACCCCCGAAGGTGTCCACCTTTGGTGGTGCTTTCGCCA
|
||||
GAGGGAAACACGAAAATTGTTAAGGAAAATAAAATCTGGGGACTTAGCTCAGTTGGTAGA
|
||||
GCGCTGTCCTTGCACGGCAGATGTCAGCGGTTCGAACCCGCTAGTCTCCACCATTGACAC
|
||||
AGTGACACTGTGTTGGCACAAAACTTGACTTTTGGTGATGTTTTGTGTACTCTTTTTGTG
|
||||
TTATGTATTCACAGCATTGACTTTGTCAATGACATAGGATTTGAAAAATATGAGACGTTA
|
||||
GTTTTAAGAGACTCTCGTTGAAAGATTTTGAAAATCTTCGATGTAAGTCGAAGGATACAT
|
||||
ACAATACATAGCGTACAAGGTCAAATAAAAATAGGTTTACGGCGGATACCTAGGCATCCA
|
||||
GAGACGAAGAAGGGCGTGGCAACCGACGAGACACTTCGAGGAGCTGGAAACAAGCTATGA
|
||||
GTCGAAGATTCCCTAATAGGGCAACCTCAAGAACTTCTTATTGAATTCATAGATAAGAAA
|
||||
GAGACAACCCGGTGAATTGAAACATCTCAGTAGCCGGAGGAGAAGAAAGCAACAGCGATT
|
||||
CCCTTAGTAGCGGCGAGCGAAGCGGGAACAGCCTAAACCCATTGAACGTCATGTTTCGTG
|
||||
GGGGTCGTGGGAGGATATATGCATAGAATTTGGGTAGACGAAGCAGCTGATACCTGCACC
|
||||
ATAGACGGTGATAGTCCGGTAGTTAAAACCTAAATAAAAGCAGAAATGAATTCAATTAAG
|
||||
AATTGGTGATCAATATATTTAATCCCAAGTAGCATGGGGCACGTGAAATCCCGTGTGAAT
|
||||
CAGCGAGGACCACCTCGTAAGGCTAAATACTCCTGGGTGACCGATAGCGAAATAGTACCG
|
||||
TGAGGGAAAGGTGAAAGAGAACCCCTGAAGGGGAGTGAAATAGTATATGAAACCGTAATC
|
||||
TGACAAGCAGTGGGAGGGTGAAGAGCCTGACCGCGTGCCTGTGGAAGAATGAACCGGCGA
|
||||
CTTATAGGGAGTGGCTTGGTTAAGGACATTTATCCGAAGCCAAAGCGAAAGCAAGTTTTC
|
||||
ATAGAGCGTTTTTGTCACTTCTTATGGACCCGAACCCGGGTGATCTAACCATGACCAGGA
|
||||
TGAAACTTGGGTAACACCAAGTGAAGGTCCGAACTCATCGATGTTGAAAAATCGTGGGAT
|
||||
GAGTTGTGGTTAGGGGTGAAATGCCAATCGAACTCGGAGCTAGCTGGTTCTCCCCGAAAT
|
||||
GTGTTGAGGCGCAGCGGTTGACGAAATAAAAGGGCTACTCGGGGGTAAAGCACTGTTTCG
|
||||
GTGCGGGCTGCGAAAGCGGTACCAAATCGTGGCAAACTAAGAATACCGGGTATTGCTTCC
|
||||
CGTCAACCAGTGAGACAGTGGGGGATAAGCTCCATTGTCAAGAGGGAAACAGCCCAGATC
|
||||
ACCAGCTAAGGCCCCAAAATGACAGCTAAGTGGTAAAGGAGGTGAGAGTGCATAAACAAC
|
||||
CAGGAGGTTTGCTTAGAAGCAGCCATCCTTTAAAGAGTGCGTAATAGCTCACTGGTGGAG
|
||||
CGCTCTTGCGCCGAAAATTTATGGGACTAAGCTGTCTGCCGAAGCTGTGGGATGTTGAAA
|
||||
AGCATGTTGCAAAATCTAAGACTTCCACCAAAGGTGGTGCGATCACCAAAGGTGTTCGCC
|
||||
ACCGGCGAGTCGAAAGCACAGAGTGCTGACCCTCCACCAAAGGTGGTGTGGAAGGATTTG
|
||||
AAAAATCTGAGACGGCAGTCGAAGGATTGTAAAAACAGTGTTTGTATCAGCATCGGTAGG
|
||||
GGAGCGTTCCGCTCTAGGTTGAAGCATCTGTGTAAATCGGTGTGGACGAAGCGGAAGTGA
|
||||
GAATGTCGGTTTGAGTAACGAAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGG
|
||||
TTCCTTCACTAGGTTCGTCCATGGAGGGTGAGTCAGGTCCTAAGGCTAGGCCGAGAGGCG
|
||||
TCGTCGATGGGAAGCAGGTTAATATTCCTGTACTACTTATGGTGTGTACCGAGGGACGGA
|
||||
GTAGGCATCTATACACCAGAGTTGGATCTGGTGAGAGGCGTTCAAGGTGATGAGAGATAG
|
||||
AATAAAAACTATTCTTGAGCTGAGTCGCGTTATGGCTTTACTCTTGACTGCCATCTTTTT
|
||||
GGTGGTCGGATGAGGTTTATATGTCATGTCAAACTTCCAAGAAAAGCTCGAACTACTAAT
|
||||
CAACCATAAAGTATCTGTACCCGAAACCGACACAGGTAGGTAGGTAGAGTATACCAAGGG
|
||||
GCGCGAGATAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGG
|
||||
GTGCCACTTTTTAAAAGAAAGTGGTCGCAGTGAGCAGGCCCAGGCGACTGTTTACCAAAA
|
||||
ACACAGGTCTCCGCTAAGTCGTAAGACAATGTATGGGGGCTGACGCCTGCCCGGTGCTGG
|
||||
AAGGTAAAGGAAGTTGGTTATTCTTCGGGAGAAGCTGACGACCGAAGCCCCAGTGAACGG
|
||||
CGGCCGTAACTATA
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025526_91.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025526_91.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_025526_91 count=1; cluster_weight=1; cluster=RRNA16S_NC_025526_91; cluster_score=1.000000; cluster_center=True;
|
||||
ctgtttatcatcgatgtatattgaactctatacatactcacataagcgttcattaagaaatgaatcacttttgcagatcttttacaggtttccttcggcaccaccttcggtggaagccttccaccgtcgcctcttcaccttcggtgatcgccagaggcgaaggcgtcgccgtccaccagaggtggtggggaacaccagaggtggttggtggtgcgataacctttggttaccaccaaaggtggacaccttcagtggtagcgaggcgaagattaaaggtggtgagaatagagaaaaaaggcacgaagtgctgaccctccaccaaaggtggtggggaaggaattcttgacacgtcgtaaatacctttaccaacaagtttttgtttctgacgtggctcaacattattgactaagaaaaacttagtataagcttgacaaatgaagaaataattattagactaaggaaataattgtaagcactttgcataattttgcgctattttttacactattgggttatacaatggtgtgttaatactatagtatataatgtacatggtggatgcttacttcggtttgtacgaattttccagatcaggtagtgttaaaaaatttaactgatttgctattatctctattccttccttcccgatcaccgacgattagtaccaaaggtgatcgcctccggcgaacacctatggtggtgagcaagaaagccaaaggctattagctcagttggttagagcgcgcccctgataagggcgaggtcgctagttcaaatctagtatagcctacccaagaagcaaagcttctagagcaaagcttctagagcaaagccgtcggaatggagtatacccgaaaggtacccggacattggttcggtaagtaaagttttcaagctgtgcttgatggctatgaatcggtgtatgatgttgaggtttgtcataagcaaagcaagaagccgaggcttgagacttagcgtcgctacccccgaaggtgtccacctttggtggtgctttcgccagagggaaacacgaaaattgttaaggaaaataaaatctggggacttagctcagttggtagagcgctgtccttgcacggcagatgtcagcggttcgaacccgctagtctccaccattgacacagtgacactgtgttggcacaaaacttgacttttggtgatgttttgtgtactctttttgtgttatgtattcacagcattgactttgtcaatgacataggatttgaaaaatatgagacgttagttttaagagactctcgttgaaagattttgaaaatcttcgatgtaagtcgaaggatacatacaatacatagcgtacaaggtcaaataaaaataggtttacggcggatacctaggcatccagagacgaagaagggcgtggcaaccgacgagacacttcgaggagctggaaacaagctatgagtcgaagattccctaatagggcaacctcaagaacttcttattgaattcatagataagaaagagacaacccggtgaattgaaacatctcagtagccggaggagaagaaagcaacagcgattcccttagtagcggcgagcgaagcgggaacagcctaaacccattgaacgtcatgtttcgtgggggtcgtgggaggatatatgcatagaatttgggtagacgaagcagctgatacctgcaccatagacggtgatagtccggtagttaaaacctaaataaaagcagaaatgaattcaattaagaattggtgatcaatatatttaatcccaagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaagagaacccctgaaggggagtgaaatagtatatgaaaccgtaatctgacaagcagtgggagggtgaagagcctgaccgcgtgcctgtggaagaatgaaccggcgacttatagggagtggcttggttaaggacatttatccgaagccaaagcgaaagcaagttttcatagagcgtttttgtcacttcttatggacccgaacccgggtgatctaaccatgaccaggatgaaacttgggtaacaccaagtgaaggtccgaactcatcgatgttgaaaaatcgtgggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggttgacgaaataaaagggctactcgggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaataccgggtattgcttcccgtcaaccagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagctaaggccccaaaatgacagctaagtggtaaaggaggtgagagtgcataaacaaccaggaggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgctcttgcgccgaaaatttatgggactaagctgtctgccgaagctgtgggatgttgaaaagcatgttgcaaaatctaagacttccaccaaaggtggtgcgatcaccaaaggtgttcgccaccggcgagtcgaaagcacagagtgctgaccctccaccaaaggtggtgtggaaggatttgaaaaatctgagacggcagtcgaaggattgtaaaaacagtgtttgtatcagcatcggtaggggagcgttccgctctaggttgaagcatctgtgtaaatcggtgtggacgaagcggaagtgagaatgtcggtttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttccttcactaggttcgtccatggagggtgagtcaggtcctaaggctaggccgagaggcgtcgtcgatgggaagcaggttaatattcctgtactacttatggtgtgtaccgagggacggagtaggcatctatacaccagagttggatctggtgagaggcgttcaaggtgatgagagatagaataaaaactattcttgagctgagtcgcgttatggctttactcttgactgccatctttttggtggtcggatgaggtttatatgtcatgtcaaacttccaagaaaagctcgaactactaatcaaccataaagtatctgtacccgaaaccgacacaggtaggtaggtagagtataccaaggggcgcgagataactctctctaaggaactcggcaaaatagccccgtaacttcgggagaaggggtgccactttttaaaagaaagtggtcgcagtgagcaggcccaggcgactgtttaccaaaaacacaggtctccgctaagtcgtaagacaatgtatgggggctgacgcctgcccggtgctggaaggtaaaggaagttggttattcttcgggagaagctgacgaccgaagccccagtgaacggcggccgtaactata
|
||||
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_025527_342.align.fasta
Normal file
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_025527_342.align.fasta
Normal file
@ -0,0 +1,27 @@
|
||||
>RRNA16S_NC_025527_342 count=1; cluster_weight=1; cluster=RRNA16S_NC_025527_342; cluster_score=1.000000; cluster_center=True;
|
||||
TTTCATGGAGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGTATGCTTAACACATGCA
|
||||
AGTCGAACGAAAAACAATTTTAGTTATAAATTTATTTATAACTAAAGTTTTTAGTGGCGG
|
||||
ACGGGTGAGTAACACGTAAGAATCTACCTTTAGGAGGGGGACAAAATTTGAATAAATTTA
|
||||
AAAGGTTTATTCGCTGGAAACAGTATGAATACCCCATATGCTGAGGAGTGAAATAATATT
|
||||
TTTGCCTAGAGATGAGCTTGCGTCTGATTAGCTTGTTGGTGGGGTAATGGCCTACCAAGG
|
||||
CCATGATCAGTAGTTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA
|
||||
GACTCCTGCGGGAGGCAGCAGTGAGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCA
|
||||
ATACCGCGTGGAGGATTGACAGCTTATGGGCCGTAAACTCCTTTTCTCAGAAAAGAAAAA
|
||||
ATTGACGGTATCTGAGGAATAAGCATCGGCTAATTCTGTGCCAGCAGCCGCGGTAAGACA
|
||||
GGAGATGCAAGTGTTATCCGGAATGATTGGGCGTAAAGGGTCTGTAGGTGGTTTGAAAAG
|
||||
TCTGTTGTTAAATACTAGGGCTTAACCCTGGTCAGGCAATAGAAACTATTAGACTAGAGT
|
||||
ACGGTAGAGGCAGAGGGAATTTTCGGTGGAGTGGTGAAATGCGTAGATCTCGAAAAGAAC
|
||||
ACCAATGGCGAAGGCACTCTGCTGGGCCGATACTGACATTGAGAGACGAAAGCTAGGGGA
|
||||
GCAAAAGGGATTAGATACCCCTGTAGTCCTAGCTGTAAACGATGGATACTAAGTGTTGGG
|
||||
TAATAATACTACTCAGTACTGTAGCTAACGCGTGAAGTATCCCGCCTGGGGAGTATGCTC
|
||||
GCAAGGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTT
|
||||
AATCTGATGCAACGCGAAGAACCTTACCAGAACTTGACATCCCATTTAGTAAGTCGAAAG
|
||||
ACATACTTTTCTCTTGTAGAAGATGGTGACAGGTGGTGCATGGCTGTCGTCAGCTCGTGT
|
||||
CGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTTTTAATTGCAATTTAT
|
||||
GTGGAAATTAGAAAGACTGCCGGTGATAAACCGGAGGAAGGTGAGGACGACGTCAAGTCG
|
||||
GCATGCCCCTTATGTTCTGGGCGACACACGTGCTACAATGGCCGAGACAATGGGATGCTA
|
||||
CTCGTGAGATTAGGCAAATCTCAAAAACTCGGTCTCAATTCGGATTGTAGGCTGAAACTC
|
||||
GCCTACATGAAGTTGGAATCGCTAGTAATCGCTGGTCAGCCATACAGCGGTGAATACGTT
|
||||
CTCGGGCCTTGTACACACCGCCCGTCACACTACCGAAATTGGTTTGGTCCAAAGTCGTGA
|
||||
CTTTAACTATATACTGTTAAATGTATTAGAAGAGAGCGCCTAAGGCAGGGCTGGTAACGA
|
||||
GAGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGTGGCTGGATCACCTCCTTT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025527_342.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025527_342.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_025527_342 count=1; cluster_weight=1; cluster=RRNA16S_NC_025527_342; cluster_score=1.000000; cluster_center=True;
|
||||
tttcatggagagtttgatcctggctcaggatgaacgctggcggtatgcttaacacatgcaagtcgaacgaaaaacaattttagttataaatttatttataactaaagtttttagtggcggacgggtgagtaacacgtaagaatctacctttaggagggggacaaaatttgaataaatttaaaaggtttattcgctggaaacagtatgaataccccatatgctgaggagtgaaataatatttttgcctagagatgagcttgcgtctgattagcttgttggtggggtaatggcctaccaaggccatgatcagtagttggtctgagaggatgatcagccacactgggactgagacacggcccagactcctgcgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaataccgcgtggaggattgacagcttatgggccgtaaactccttttctcagaaaagaaaaaattgacggtatctgaggaataagcatcggctaattctgtgccagcagccgcggtaagacaggagatgcaagtgttatccggaatgattgggcgtaaagggtctgtaggtggtttgaaaagtctgttgttaaatactagggcttaaccctggtcaggcaatagaaactattagactagagtacggtagaggcagagggaattttcggtggagtggtgaaatgcgtagatctcgaaaagaacaccaatggcgaaggcactctgctgggccgatactgacattgagagacgaaagctaggggagcaaaagggattagatacccctgtagtcctagctgtaaacgatggatactaagtgttgggtaataatactactcagtactgtagctaacgcgtgaagtatcccgcctggggagtatgctcgcaagggtgaaactcaaaggaattgacgggggcccgcacaagcggtggagcatgtggtttaatctgatgcaacgcgaagaaccttaccagaacttgacatcccatttagtaagtcgaaagacatacttttctcttgtagaagatggtgacaggtggtgcatggctgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaacccttgtttttaattgcaatttatgtggaaattagaaagactgccggtgataaaccggaggaaggtgaggacgacgtcaagtcggcatgccccttatgttctgggcgacacacgtgctacaatggccgagacaatgggatgctactcgtgagattaggcaaatctcaaaaactcggtctcaattcggattgtaggctgaaactcgcctacatgaagttggaatcgctagtaatcgctggtcagccatacagcggtgaatacgttctcgggccttgtacacaccgcccgtcacactaccgaaattggtttggtccaaagtcgtgactttaactatatactgttaaatgtattagaagagagcgcctaaggcagggctggtaacgagagtgaagtcgtaacaaggtagccgtactggaaggtgtggctggatcacctccttt
|
||||
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_025528_354.align.fasta
Normal file
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_025528_354.align.fasta
Normal file
@ -0,0 +1,27 @@
|
||||
>RRNA16S_NC_025528_354 count=1; cluster_weight=1; cluster=RRNA16S_NC_025528_354; cluster_score=1.000000; cluster_center=True;
|
||||
AAAATAGATGCTTGCCCAATTAGTCTGTAATCATTTAAAGATGGATTATAGACTCATGCT
|
||||
TATCCAGTTCTACTGCAACTGTTTTTTTTATTAACTTTAATAGTGTTCAGTATTCAATCA
|
||||
AAAAATTGTCACTGTTGTTTTTGTGAAATAAAAAGATAAGAAAAAGCAGACACTTCGTTA
|
||||
ATAGTAATAGAGCTAGTTCGAATCTACCTTTCACCTAACACTTAGGTGAAAGTAAAGGGG
|
||||
GTTTTAACATAATTTAAATTGGATTCGCTAACTTTGCTTTTACCTTGTTTTTACTAAGCT
|
||||
TCAAACCTTGCTAAAAACTTGTCGCTAGGTAATCAGTTATAAGTAGACAAGGTTAGCAAG
|
||||
TTAAATACTGTTTTCAGCAAAAAGATTGGTGCTCAAAACTGACGAATGTTCTAACTTTGT
|
||||
TTCTACTTCTAACCTAGCGTCTGCTAAAAGATTGTCGCGTCTACTTCGTTGGAAAAACTT
|
||||
GTCTAACTGAGCCTGCGACTAGTCTGGCGCTGGCTCAGTAAAGGTAATAACCTTAATACA
|
||||
TTGTAGATTTATAAAGGTGAGCAAACAAAAGTAAAAACAAAATAGACAGCTTCGTAATCT
|
||||
ATGGGCGTAGTATGAAATAAAAATCTATGACTAAACAAAACACATTCAAAAGTATTCAAG
|
||||
TGGAATCTATTAGAATTGGATTAGCTTCGCCGGATTGTATTAGAAAATGGGCTGAAAGAA
|
||||
CACTACCAAATGGAAAAATTATTGGAAAAGTTACTAGTCGAGAAACAGTAAATTATAAAA
|
||||
CATTTAAACCTGAAAAAGATGGACTATTCTGTGAACGAATTTTTGGTCCTGTTACAAATC
|
||||
TTGAATGTTCTTGTGGGCGGAAAAAAACTGAACCCGAACAGCAATTTTGTACGGAATGCG
|
||||
ATGTAGAATTTACAACTTCCAGAGTAAGACGATATCGTCTTGGGTATATTGAATTAATTT
|
||||
CCCCGGTTGTACATATTTGGTATTTAAAAGGTAGATTAAGTTATATATCTATTTTATTAG
|
||||
ACATGCGTCGAAAAAATGTTGAAGCTATTACTTATTGTACAAGCATTATAGATAATATGT
|
||||
ATGATGAGACGGAAAAATCTATTCACAGCGAAACAGACAATTCAAAAAAAATTTTAAAAA
|
||||
AACAACTACAAAAAACATTTTTAAATAATTATTATACGGTTTCGCAAACTTGTTCCTGGA
|
||||
AAACACAATCTGATTTAGATAAATTTTCTTGCTATATGACTTGTTTGCCACAATGTGAAG
|
||||
ATATTCCTATACCTAGTTATTCTAATCGAATTAATAATAAATTTATCTTTTCTAATAACG
|
||||
TTTATTTAAATACCACACAATTGAGTACCGTTTTAACGGGTCCAGAAGCAATCCGTTATT
|
||||
TCCTTGCAAATTTAGATTTACAACTTTTAGATAGACAAATTAAAGTTGAATTATTTGAAC
|
||||
TAAACGAAGAAATTCACGCTTTTGAAAATATAGGGTTTCTTTTTTTTGATGAACGAAGAC
|
||||
TATTACAAAAACTACTCTATATTCGATCAAAAAAGTTACGTCGTTTAAAATTAGTA
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025528_354.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025528_354.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_025528_354 count=1; cluster_weight=1; cluster=RRNA16S_NC_025528_354; cluster_score=1.000000; cluster_center=True;
|
||||
aaaatagatgcttgcccaattagtctgtaatcatttaaagatggattatagactcatgcttatccagttctactgcaactgttttttttattaactttaatagtgttcagtattcaatcaaaaaattgtcactgttgtttttgtgaaataaaaagataagaaaaagcagacacttcgttaatagtaatagagctagttcgaatctacctttcacctaacacttaggtgaaagtaaagggggttttaacataatttaaattggattcgctaactttgcttttaccttgtttttactaagcttcaaaccttgctaaaaacttgtcgctaggtaatcagttataagtagacaaggttagcaagttaaatactgttttcagcaaaaagattggtgctcaaaactgacgaatgttctaactttgtttctacttctaacctagcgtctgctaaaagattgtcgcgtctacttcgttggaaaaacttgtctaactgagcctgcgactagtctggcgctggctcagtaaaggtaataaccttaatacattgtagatttataaaggtgagcaaacaaaagtaaaaacaaaatagacagcttcgtaatctatgggcgtagtatgaaataaaaatctatgactaaacaaaacacattcaaaagtattcaagtggaatctattagaattggattagcttcgccggattgtattagaaaatgggctgaaagaacactaccaaatggaaaaattattggaaaagttactagtcgagaaacagtaaattataaaacatttaaacctgaaaaagatggactattctgtgaacgaatttttggtcctgttacaaatcttgaatgttcttgtgggcggaaaaaaactgaacccgaacagcaattttgtacggaatgcgatgtagaatttacaacttccagagtaagacgatatcgtcttgggtatattgaattaatttccccggttgtacatatttggtatttaaaaggtagattaagttatatatctattttattagacatgcgtcgaaaaaatgttgaagctattacttattgtacaagcattatagataatatgtatgatgagacggaaaaatctattcacagcgaaacagacaattcaaaaaaaattttaaaaaaacaactacaaaaaacatttttaaataattattatacggtttcgcaaacttgttcctggaaaacacaatctgatttagataaattttcttgctatatgacttgtttgccacaatgtgaagatattcctatacctagttattctaatcgaattaataataaatttatcttttctaataacgtttatttaaataccacacaattgagtaccgttttaacgggtccagaagcaatccgttatttccttgcaaatttagatttacaacttttagatagacaaattaaagttgaattatttgaactaaacgaagaaattcacgcttttgaaaatatagggtttcttttttttgatgaacgaagactattacaaaaactactctatattcgatcaaaaaagttacgtcgtttaaaattagta
|
||||
32
data/rrna/RRNA_16S/00001_RRNA16S_NC_025529_121.align.fasta
Normal file
32
data/rrna/RRNA_16S/00001_RRNA16S_NC_025529_121.align.fasta
Normal file
@ -0,0 +1,32 @@
|
||||
>RRNA16S_NC_025529_121 count=1; cluster_weight=1; cluster=RRNA16S_NC_025529_121; cluster_score=1.000000; cluster_center=True;
|
||||
TAAGGAGGTGATCCAGCCGCACCTTCCAGTACGGCTACCTTGTTACGACTTCACTCTCAT
|
||||
TACCAGCCCTGCCTTAGGCGCTCTCGTCCCTTACGGGTTAGAGTTACGACTTTGGGCCAA
|
||||
GCCGACTCTGGTAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGCTGT
|
||||
ATGGCTGACCAGCGATTACTAGCGATTCCGACTTCATGCAGGCGAGTTGCAGCCTGCAAT
|
||||
CCGAACTGAGATTAGGTTTTTGAGGTTAGCTTGCTCTCGCGAGGTAGCATCTCATTGTCC
|
||||
TAACCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCATGCTGACTTGACGTCATCC
|
||||
TCACCTTCCTCCGGCTTATCACCGGCAGTCTTTCTAGTTTCCTTGACATATCGTAGTCTT
|
||||
TACCAAAGTGTAGGTAAAGACCAAAGGGCCAACGGTAATCAAGCGAAGCTTGATAAACCT
|
||||
GAGGCCGTAGCCTGGCTTTAATAAGCGAAGCTTATTAAAACTTGATATTGTTCTTCGAAC
|
||||
AATATTTAGGAACCTAGGAAGAAGACTTCCATCCTTACCATGTCCGGTAAGGACAATGGC
|
||||
GAAGTGGAAGATCCTAGTGTGTGCAAGCACACACTTTGGACTTGTATTCTTCCCATGGGG
|
||||
CTCCCAGGTATTTATACTTAGAAAAGCAACTAAAAACAAGGGTTGCGCTCGTTGCGGGAC
|
||||
TTAACCCAACATCTCACGACACGAGCTGACGACAGCCATGCACCACCTGTGTCCACCTCT
|
||||
AAAAACCCAAAAGGGTTCTAGTAAAAACCTCTTTTTCAAGAGATTAAATGGCATGTCAAG
|
||||
CCCTGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGG
|
||||
CCCCCGTCAATTCCTTTGAGTTTCACTCTTGCGAGCATACTCCCCAGGCGGGATACTTCA
|
||||
CGCGTTAGCTACAGTACTGGACGTTTTGAGTCGCACAGCACTTAGTATCCATCGTTTACG
|
||||
GCTAGGACTACTGGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGTCTCTGAGTGTCA
|
||||
GTTTCGGCCCAGCAGAGTGCTTTCGCCATTGGTGTTCTTCCCGATCTCTACGCATTTCAC
|
||||
CGCTACACCGGGAATTCCCTCTGCCCCTACCGTACTCAAGCTCATTAGTTTCTACTGCCG
|
||||
ACTCAGGGTTAAGCCCTGATCTTTAACAGTAGACTTAATAAACCACCTACAGACGCTTTA
|
||||
CGCCCAATCATTCCGGATAACGCTTGCATCCTCCGTCTTACCGCGGCTGCTGGCACGGAG
|
||||
TTAGCCGATGCTTATTCCTCAGATACCGTCAGAACTTCTTCTCTGAGAAAAGGAGTTTAC
|
||||
GACCCACAGGCTGTCATCCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGA
|
||||
AAATTCCTCACTGCTGCCTTCCGTAGAAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTG
|
||||
ATCATCCTCTCAGACCAGCTACTGATCGTTGCCTTGGTAGGCAATTACCCCACCAACCAG
|
||||
CTAATCAGACGCAAGCCCATCTTTAGGCAGAATACTATTCCTTTTACTCCTCAGCTTATG
|
||||
GGGTATTAGCAACCGTTTCCAGTTGTTGTCCCCCTCCTAAAGGTAGGTTCTTACGCGTTA
|
||||
CTCACCCGTCCGCCACTAAGAATTTAATTTTTTTAAACCTAAGCCTAAAAAAATTAAACC
|
||||
TCCGTTCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAGCCAGGATCAAAC
|
||||
TCTCCATGAAA
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025529_121.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025529_121.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_025529_121 count=1; cluster_weight=1; cluster=RRNA16S_NC_025529_121; cluster_score=1.000000; cluster_center=True;
|
||||
taaggaggtgatccagccgcaccttccagtacggctaccttgttacgacttcactctcattaccagccctgccttaggcgctctcgtcccttacgggttagagttacgactttgggccaagccgactctggtagtgtgacgggcggtgtgtacaaggcccgggaacgtattcaccgctgtatggctgaccagcgattactagcgattccgacttcatgcaggcgagttgcagcctgcaatccgaactgagattaggtttttgaggttagcttgctctcgcgaggtagcatctcattgtcctaaccattgtagcacgtgtgtcgcccagggcataaggggcatgctgacttgacgtcatcctcaccttcctccggcttatcaccggcagtctttctagtttccttgacatatcgtagtctttaccaaagtgtaggtaaagaccaaagggccaacggtaatcaagcgaagcttgataaacctgaggccgtagcctggctttaataagcgaagcttattaaaacttgatattgttcttcgaacaatatttaggaacctaggaagaagacttccatccttaccatgtccggtaaggacaatggcgaagtggaagatcctagtgtgtgcaagcacacactttggacttgtattcttcccatggggctcccaggtatttatacttagaaaagcaactaaaaacaagggttgcgctcgttgcgggacttaacccaacatctcacgacacgagctgacgacagccatgcaccacctgtgtccacctctaaaaacccaaaagggttctagtaaaaacctctttttcaagagattaaatggcatgtcaagccctggtaaggttcttcgcgttgcatcgaattaaaccacatgctccaccgcttgtgcgggcccccgtcaattcctttgagtttcactcttgcgagcatactccccaggcgggatacttcacgcgttagctacagtactggacgttttgagtcgcacagcacttagtatccatcgtttacggctaggactactggggtatctaatcccattcgctcccctagctttcgtctctgagtgtcagtttcggcccagcagagtgctttcgccattggtgttcttcccgatctctacgcatttcaccgctacaccgggaattccctctgcccctaccgtactcaagctcattagtttctactgccgactcagggttaagccctgatctttaacagtagacttaataaaccacctacagacgctttacgcccaatcattccggataacgcttgcatcctccgtcttaccgcggctgctggcacggagttagccgatgcttattcctcagataccgtcagaacttcttctctgagaaaaggagtttacgacccacaggctgtcatcctccacgcggcattgctccgtcaggctttcgcccattgcggaaaattcctcactgctgccttccgtagaagtctgggccgtgtctcagtcccagtgtggctgatcatcctctcagaccagctactgatcgttgccttggtaggcaattaccccaccaaccagctaatcagacgcaagcccatctttaggcagaatactattccttttactcctcagcttatggggtattagcaaccgtttccagttgttgtccccctcctaaaggtaggttcttacgcgttactcacccgtccgccactaagaatttaatttttttaaacctaagcctaaaaaaattaaacctccgttcgacttgcatgtgttaagcatgccgccagcgttcatcctgagccaggatcaaactctccatgaaa
|
||||
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_025531_364.align.fasta
Normal file
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_025531_364.align.fasta
Normal file
@ -0,0 +1,26 @@
|
||||
>RRNA16S_NC_025531_364 count=1; cluster_weight=1; cluster=RRNA16S_NC_025531_364; cluster_score=1.000000; cluster_center=True;
|
||||
AAAGTATCCTCATAAAAAATTACTTCTCGAAAAAAAGGGCCTATTTAATTTTTTTAAATG
|
||||
TTTTAAGAGAAATTTAGTATATTATAGTTATATATTTATAATAAAAAAATTAAATATTGC
|
||||
CAGGAACCAGACTTGAACTGGTGACACGAGGATTTTCAGTCCTCTGCTCTACCAACTGAG
|
||||
CTATCCCGGCTATTTTTATTAATTAAAATAATAACATATTTTTTAGCTTGATGACAAGAT
|
||||
TAAATTTCTATTTTTTTTATTATTAATTTAATATTTATTTATTAGAACTTTTTATGTTAA
|
||||
ATATAATTCGCCTAACTTTTGCAATATGTGTTATCTTATTAATTGTTCCACAAACACAAA
|
||||
CAGAAAATGTATTATTACGAATTTTTTATGAAACGAGAATTTTTAAAAATTATGGTCAAA
|
||||
CAAAAAAAGTCTTAAATTTCGTCACCTGGATTTGTATCTTTATTTTCTTATTACTTATAT
|
||||
TGACTAATATTTTCTATTAAAACCTATAGAAAACACTTTAGTAAAAGAGGATAAAAGGGG
|
||||
GTCTGTGTTATTCATTTTAATTTTAAATTTTTGCTATTAGTGGTTAAAAACTTAAAAAAT
|
||||
AAATTATATTTTTTAAGTTTTAGGGATTCTAATAAGTAATTTTAGTTTAAAAAATTAGTA
|
||||
GGATACTGAAAATAAACGAAGCTTGTTTAAATAATTTTTTTTTAGATTAATAGCTTTTCT
|
||||
TTATATCCATCAGATTATACGTCAATTTGGCTCCAAACAAAGTTATGTCTTAGTATGTCT
|
||||
TAAATTGAATTCGAGACGTGTCCCTTATAAAAATTAATCAAAACTTTTAAAAAAGTTTTT
|
||||
AATTTATTGTACAAACGTTGAGACAAAGTGTTGTTTTACGAGTATAGCTCGTAAAACAAA
|
||||
AATAAAAGACGCACAACTCTATTAGATATCTAAAAAAATATTTAAAATTTGTAAAACTAA
|
||||
CTTGTAAAGCCAAGATTACATTTTTAATAAAACCATATAAAAAAACTTACCTTAGATATT
|
||||
TTGGAGACAGCGCTAAAGAAACTTAAATAAACCTAAATTTAGAATAAAACAAAATATAAA
|
||||
CTTGGGTTTCAGCTTAAATTTTAAAGAAGATTTCTTTTATTTTAAATTTTCCTTAAAACT
|
||||
TTAGAAATTAAAAAAAATAAAGAAGTTTAACTTACTCTTTAAAATAACAGTAGTTTAAGA
|
||||
AAGTTATAGCACACCTAAAAAAAAAACAACTGGGGTGGAAGGATTCGAACCTCCGAATGG
|
||||
CGGTACCAAAAACCGCTGCCTTACCACTTGGCGACACCCCATTAAATATAAGATTTATAT
|
||||
ATTAAGTATAACATTACTGAAAGTTTTTATGTCAACTCCATTTTTTATTTTACTATTTTC
|
||||
AGACTATATTAGCCACTAAACTAATAACTTGTTTTTTAAACAGCTTAAATAAAAAATAAA
|
||||
ATTAAAGTTTAGCCTTGCTTGAACACTATTTAAAAAGCTGGTCTGGAGACACGTTGTAT
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025531_364.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025531_364.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_025531_364 count=1; cluster_weight=1; cluster=RRNA16S_NC_025531_364; cluster_score=1.000000; cluster_center=True;
|
||||
aaagtatcctcataaaaaattacttctcgaaaaaaagggcctatttaatttttttaaatgttttaagagaaatttagtatattatagttatatatttataataaaaaaattaaatattgccaggaaccagacttgaactggtgacacgaggattttcagtcctctgctctaccaactgagctatcccggctatttttattaattaaaataataacatattttttagcttgatgacaagattaaatttctattttttttattattaatttaatatttatttattagaactttttatgttaaatataattcgcctaacttttgcaatatgtgttatcttattaattgttccacaaacacaaacagaaaatgtattattacgaattttttatgaaacgagaatttttaaaaattatggtcaaacaaaaaaagtcttaaatttcgtcacctggatttgtatctttattttcttattacttatattgactaatattttctattaaaacctatagaaaacactttagtaaaagaggataaaagggggtctgtgttattcattttaattttaaatttttgctattagtggttaaaaacttaaaaaataaattatattttttaagttttagggattctaataagtaattttagtttaaaaaattagtaggatactgaaaataaacgaagcttgtttaaataatttttttttagattaatagcttttctttatatccatcagattatacgtcaatttggctccaaacaaagttatgtcttagtatgtcttaaattgaattcgagacgtgtcccttataaaaattaatcaaaacttttaaaaaagtttttaatttattgtacaaacgttgagacaaagtgttgttttacgagtatagctcgtaaaacaaaaataaaagacgcacaactctattagatatctaaaaaaatatttaaaatttgtaaaactaacttgtaaagccaagattacatttttaataaaaccatataaaaaaacttaccttagatattttggagacagcgctaaagaaacttaaataaacctaaatttagaataaaacaaaatataaacttgggtttcagcttaaattttaaagaagatttcttttattttaaattttccttaaaactttagaaattaaaaaaaataaagaagtttaacttactctttaaaataacagtagtttaagaaagttatagcacacctaaaaaaaaaacaactggggtggaaggattcgaacctccgaatggcggtaccaaaaaccgctgccttaccacttggcgacaccccattaaatataagatttatatattaagtataacattactgaaagtttttatgtcaactccattttttattttactattttcagactatattagccactaaactaataacttgttttttaaacagcttaaataaaaaataaaattaaagtttagccttgcttgaacactatttaaaaagctggtctggagacacgttgtat
|
||||
28
data/rrna/RRNA_16S/00001_RRNA16S_NC_025533_343.align.fasta
Normal file
28
data/rrna/RRNA_16S/00001_RRNA16S_NC_025533_343.align.fasta
Normal file
@ -0,0 +1,28 @@
|
||||
>RRNA16S_NC_025533_343 count=1; cluster_weight=1; cluster=RRNA16S_NC_025533_343; cluster_score=1.000000; cluster_center=True;
|
||||
TTTCATGGAGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGTATGCTTAACACATGCA
|
||||
AGTCGAACGAAAGTAATTTTTTTAAAGGTAACTTTAAAAAAATTACTTTAGTGGCGGACG
|
||||
GGTGAAGAACACGTAAGAACCTACCTTTAGGTGGGGGACAACAACTGGAAACGGTTGCTA
|
||||
ATACCCCATATGCTGAGGAGTAAAAGAGTTTATTCTCGCCTAAAGATGGGCTTGCGTCTG
|
||||
ATTAGCTTGTTGGTGAGGTAAAAGCTCACCAAGGCAACGATCAGTAGCTGGTCTGAGAGG
|
||||
ATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGAGG
|
||||
AATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGGAGGATGACAGCCCGT
|
||||
GGGTCGTAAACTCCTTTTCTCAGAAAAGAAAAAATGACGGTATCTGAGGAATAAGCATCG
|
||||
GCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATGATT
|
||||
GGGCGTAAAGCGTTTTAAGGTGGTTTGGTAAGTCTACTGTTAAATATCAGGGCTTAACCC
|
||||
TGAACAGGCAGTGGAAACTAGCAAGCTTGAGTACGGTAGGGGCAAAGGGAATTCCCGGTG
|
||||
TAGCGGTGAAATGCGTAGATATCGGGAAGAACACCAAAGGCGAAAGCACTTTGCTGGGCC
|
||||
GAAACTGACACTGATAGACGAAAGCTAGGGGAGCAAATGGGATTAGATACCCCAGTAGTC
|
||||
CTAGCCGTAAACGATGGATACTAAGTGCTGTGCGATTCAAAACGTCCAGTGCTGTAGCTA
|
||||
ACGCGTGAAGTATCCCGCCTGGGGAGTATGCTCGCAAGAGTGAAACTCAAAGGAATTGAC
|
||||
GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTAC
|
||||
CAGGGCTTGACATGCCACTTTTTCTTTTGAAAGAGAGAATTTTTTTGGTGGACACAGGTG
|
||||
GTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCA
|
||||
ACCCTTGTTTTTAGTTGCACTTGAATAAAATTTTATTTTTACCAAGTGGTTTCTTTTTTC
|
||||
TGTATATTTTTTTTATACAAAAAAAATATACAGAAAAGTAATTAAGAAAATAAAAAATTT
|
||||
AATTTTTTATTATAAAACTAAAAAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGA
|
||||
CGTCAAGTCAGCATGCCCCTTATGTCCTGGGCTACACACGTGCTACAATGGCCGGGACAA
|
||||
TGAGATGCAACCCCGGAAGGGTGAGCCAACCTCAAAAACCCGGTCTCAGTTCGGATTGCA
|
||||
GGCTGCAACTCGCCTGCATGAAGTCGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCG
|
||||
GTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGGGAGCCGGCTTAGCC
|
||||
CAAAGTCGTTACCCTAACCTTTTTGGAGGGGGATGCCTAAGGCAGAGCTGGTGACTGGGG
|
||||
TGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCACCTCCTTA
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025533_343.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025533_343.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_025533_343 count=1; cluster_weight=1; cluster=RRNA16S_NC_025533_343; cluster_score=1.000000; cluster_center=True;
|
||||
tttcatggagagtttgatcctggctcaggatgaacgctggcggtatgcttaacacatgcaagtcgaacgaaagtaatttttttaaaggtaactttaaaaaaattactttagtggcggacgggtgaagaacacgtaagaacctacctttaggtgggggacaacaactggaaacggttgctaataccccatatgctgaggagtaaaagagtttattctcgcctaaagatgggcttgcgtctgattagcttgttggtgaggtaaaagctcaccaaggcaacgatcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaataccgcgtggaggatgacagcccgtgggtcgtaaactccttttctcagaaaagaaaaaatgacggtatctgaggaataagcatcggctaactccgtgccagcagccgcggtaatacggaggatgcaagcgttatccggaatgattgggcgtaaagcgttttaaggtggtttggtaagtctactgttaaatatcagggcttaaccctgaacaggcagtggaaactagcaagcttgagtacggtaggggcaaagggaattcccggtgtagcggtgaaatgcgtagatatcgggaagaacaccaaaggcgaaagcactttgctgggccgaaactgacactgatagacgaaagctaggggagcaaatgggattagataccccagtagtcctagccgtaaacgatggatactaagtgctgtgcgattcaaaacgtccagtgctgtagctaacgcgtgaagtatcccgcctggggagtatgctcgcaagagtgaaactcaaaggaattgacgggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagggcttgacatgccactttttcttttgaaagagagaatttttttggtggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaacccttgtttttagttgcacttgaataaaattttatttttaccaagtggtttcttttttctgtatattttttttatacaaaaaaaatatacagaaaagtaattaagaaaataaaaaatttaattttttattataaaactaaaaagactgccggtgataagccggaggaaggtgaggatgacgtcaagtcagcatgccccttatgtcctgggctacacacgtgctacaatggccgggacaatgagatgcaaccccggaagggtgagccaacctcaaaaacccggtctcagttcggattgcaggctgcaactcgcctgcatgaagtcggaatcgctagtaatcgccggtcagccatacggcggtgaatacgttcccgggccttgtacacaccgcccgtcacaccacgggagccggcttagcccaaagtcgttaccctaacctttttggagggggatgcctaaggcagagctggtgactggggtgaagtcgtaacaaggtagccgtactggaaggtgcggctggatcacctcctta
|
||||
2805
data/rrna/RRNA_16S/00001_RRNA16S_NC_025534_93.align.fasta
Normal file
2805
data/rrna/RRNA_16S/00001_RRNA16S_NC_025534_93.align.fasta
Normal file
File diff suppressed because it is too large
Load Diff
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025534_93.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025534_93.fasta
Normal file
File diff suppressed because one or more lines are too long
@ -0,0 +1,4 @@
|
||||
>RRNA16S_NC_025535_351 count=1; cluster_weight=1; cluster=RRNA16S_NC_025535_351; cluster_score=1.000000; cluster_center=True;
|
||||
TTTTTGGTGTCTTTGCTAGTATGGACCCACACCAATCCATCTCGAACTTGGTTGTGAAAC
|
||||
ATACTAGGAGTGACAATACTTAAGCCGTGAGGCTTTGGAAAGATAGCTTGATGCCAGAAA
|
||||
A
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025535_351.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025535_351.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_025535_351 count=1; cluster_weight=1; cluster=RRNA16S_NC_025535_351; cluster_score=1.000000; cluster_center=True;
|
||||
tttttggtgtctttgctagtatggacccacaccaatccatctcgaacttggttgtgaaacatactaggagtgacaatacttaagccgtgaggctttggaaagatagcttgatgccagaaaa
|
||||
@ -0,0 +1,4 @@
|
||||
>RRNA16S_NC_025536_334 count=1; cluster_weight=1; cluster=RRNA16S_NC_025536_334; cluster_score=1.000000; cluster_center=True;
|
||||
TTCTAAGTAAACTAAGTTAAAAAAATAAAAATTTATTAAAAGCCTTAGTGGTGAAATGGT
|
||||
ATACACGATTGATTCAAAATCAATTTTCAAAAGAATTGGAGGTTCGAATCCTCTCTAAGG
|
||||
C
|
||||
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025536_334.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025536_334.fasta
Normal file
@ -0,0 +1,2 @@
|
||||
>RRNA16S_NC_025536_334 count=1; cluster_weight=1; cluster=RRNA16S_NC_025536_334; cluster_score=1.000000; cluster_center=True;
|
||||
ttctaagtaaactaagttaaaaaaataaaaatttattaaaagccttagtggtgaaatggtatacacgattgattcaaaatcaattttcaaaagaattggaggttcgaatcctctctaaggc
|
||||
Some files were not shown because too many files have changed in this diff Show More
Reference in New Issue
Block a user